RNA–Protein interactions for RNA: ENST00000511248.1

PRKAA1-208, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, human

TSL 2

Gene PRKAA1, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAA1-208	ENST00000511248	TRAF5	O00463	557 aa		13.23	□□□□□ -0.29
PRKAA1-208	ENST00000511248	HCLS1	P14317	486 aa	Predicted RBP	13.23	□□□□□ -0.29
PRKAA1-208	ENST00000511248	TMPO	P42166	694 aa	Known RBP	13.23	□□□□□ -0.29
PRKAA1-208	ENST00000511248	COPS6	Q7L5N1	327 aa		13.23	□□□□□ -0.29
PRKAA1-208	ENST00000511248	NLRP10	Q86W26	655 aa		13.23	□□□□□ -0.29
PRKAA1-208	ENST00000511248	XAGE3	Q8WTP9	111 aa		13.23	□□□□□ -0.29
PRKAA1-208	ENST00000511248	NECTIN2	Q92692	538 aa		13.23	□□□□□ -0.29
PRKAA1-208	ENST00000511248	MRS2	Q9HD23	443 aa		13.23	□□□□□ -0.29
PRKAA1-208	ENST00000511248	BABAM1	Q9NWV8	329 aa		13.23	□□□□□ -0.29
PRKAA1-208	ENST00000511248	TLL2	Q9Y6L7	1015 aa		13.23	□□□□□ -0.29
PRKAA1-208	ENST00000511248	CA12	O43570	354 aa		13.22	□□□□□ -0.29
PRKAA1-208	ENST00000511248	KRT24	Q2M2I5	525 aa		13.22	□□□□□ -0.29
PRKAA1-208	ENST00000511248	CST9	Q5W186	159 aa		13.22	□□□□□ -0.29
PRKAA1-208	ENST00000511248	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.22	□□□□□ -0.29
PRKAA1-208	ENST00000511248	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.22	□□□□□ -0.29
PRKAA1-208	ENST00000511248	ADARB2	Q9NS39	739 aa	Known RBP	13.22	□□□□□ -0.29
PRKAA1-208	ENST00000511248	FOXD4L1	Q9NU39	408 aa		13.22	□□□□□ -0.29
PRKAA1-208	ENST00000511248	GPRC5D	Q9NZD1	345 aa		13.22	□□□□□ -0.29
PRKAA1-208	ENST00000511248	ZNRF3	Q9ULT6	936 aa		13.22	□□□□□ -0.29
PRKAA1-208	ENST00000511248	BBOX1	O75936	387 aa		13.21	□□□□□ -0.29
PRKAA1-208	ENST00000511248	SLC34A2	O95436	690 aa		13.21	□□□□□ -0.29
PRKAA1-208	ENST00000511248	RGS19	P49795	217 aa		13.21	□□□□□ -0.29
PRKAA1-208	ENST00000511248	CXCL9	Q07325	125 aa		13.21	□□□□□ -0.29
PRKAA1-208	ENST00000511248	LMOD3	Q0VAK6	560 aa		13.21	□□□□□ -0.29
PRKAA1-208	ENST00000511248	AIMP1	Q12904	312 aa	Known RBP	13.21	□□□□□ -0.29
PRKAA1-208	ENST00000511248	CYP4F22	Q6NT55	531 aa		13.21	□□□□□ -0.29
PRKAA1-208	ENST00000511248	SUPT20H	Q8NEM7	779 aa		13.21	□□□□□ -0.29
PRKAA1-208	ENST00000511248	HHIPL1	Q96JK4	782 aa		13.21	□□□□□ -0.29
PRKAA1-208	ENST00000511248	GMPS	P49915	693 aa	Predicted RBP	13.2	□□□□□ -0.3
PRKAA1-208	ENST00000511248	TCIRG1	Q13488	830 aa		13.2	□□□□□ -0.3
PRKAA1-208	ENST00000511248	FAM161A	Q3B820	660 aa		13.2	□□□□□ -0.3
PRKAA1-208	ENST00000511248	DPP8	Q6V1X1	898 aa	Predicted RBP	13.2	□□□□□ -0.3
PRKAA1-208	ENST00000511248	SP8	Q8IXZ3	490 aa		13.2	□□□□□ -0.3
PRKAA1-208	ENST00000511248	CCDC146	Q8IYE0	955 aa		13.2	□□□□□ -0.3
PRKAA1-208	ENST00000511248	ZNF428	Q96B54	188 aa		13.2	□□□□□ -0.3
PRKAA1-208	ENST00000511248	TRMT112	Q9UI30	125 aa	Known RBP	13.2	□□□□□ -0.3
PRKAA1-208	ENST00000511248	THSD7B	Q9C0I4	1608 aa		13.2	□□□□□ -0.3
PRKAA1-208	ENST00000511248	SH3TC1	Q8TE82	1336 aa		13.19	□□□□□ -0.3
PRKAA1-208	ENST00000511248	CCDC85C	A6NKD9	419 aa		13.19	□□□□□ -0.3
PRKAA1-208	ENST00000511248	CHL1	O00533	1208 aa		13.19	□□□□□ -0.3
PRKAA1-208	ENST00000511248	MLLT1	Q03111	559 aa	Predicted RBP	13.19	□□□□□ -0.3
PRKAA1-208	ENST00000511248	KIAA2012	Q0VF49	1180 aa		13.19	□□□□□ -0.3
PRKAA1-208	ENST00000511248	HSP90AB3P	Q58FF7	597 aa		13.19	□□□□□ -0.3
PRKAA1-208	ENST00000511248	SAPCD2	Q86UD0	394 aa		13.19	□□□□□ -0.3
PRKAA1-208	ENST00000511248	ZC3H15	Q8WU90	426 aa	Known RBP	13.19	□□□□□ -0.3
PRKAA1-208	ENST00000511248	CHPF2	Q9P2E5	772 aa		13.19	□□□□□ -0.3
PRKAA1-208	ENST00000511248	PGAP2	Q9UHJ9	254 aa		13.19	□□□□□ -0.3
PRKAA1-208	ENST00000511248	LAMB2	P55268	1798 aa		13.18	□□□□□ -0.3
PRKAA1-208	ENST00000511248	ANKRD36C	Q5JPF3	1778 aa		13.18	□□□□□ -0.3
PRKAA1-208	ENST00000511248	ZBTB22	O15209	634 aa		13.18	□□□□□ -0.3
PRKAA1-208	ENST00000511248	RAD17	O75943	681 aa		13.18	□□□□□ -0.3
PRKAA1-208	ENST00000511248	GRAP	Q13588	217 aa		13.18	□□□□□ -0.3
PRKAA1-208	ENST00000511248	NEUROD2	Q15784	382 aa		13.18	□□□□□ -0.3
PRKAA1-208	ENST00000511248	DDX46	Q7L014	1031 aa	Known RBP	13.18	□□□□□ -0.3
PRKAA1-208	ENST00000511248	MPND	Q8N594	471 aa		13.18	□□□□□ -0.3
PRKAA1-208	ENST00000511248	GRAPL	Q8TC17	118 aa	Predicted RBP	13.18	□□□□□ -0.3
PRKAA1-208	ENST00000511248	TRIM35	Q9UPQ4	493 aa		13.18	□□□□□ -0.3
PRKAA1-208	ENST00000511248	DUOX1	Q9NRD9	1551 aa		13.18	□□□□□ -0.3
PRKAA1-208	ENST00000511248	CDHR2	Q9BYE9	1310 aa		13.17	□□□□□ -0.3
PRKAA1-208	ENST00000511248	YDJC	A8MPS7	323 aa		13.17	□□□□□ -0.3
PRKAA1-208	ENST00000511248	MYCN	P04198	464 aa	Predicted RBP	13.17	□□□□□ -0.3
PRKAA1-208	ENST00000511248	GRM1	Q13255	1194 aa		13.17	□□□□□ -0.3
PRKAA1-208	ENST00000511248	LAS1L	Q9Y4W2	734 aa	Known RBP	13.17	□□□□□ -0.3
PRKAA1-208	ENST00000511248	SHTN1	A0MZ66	631 aa		13.16	□□□□□ -0.3
PRKAA1-208	ENST00000511248	CELF2	O95319	508 aa	Known RBP	13.16	□□□□□ -0.3
PRKAA1-208	ENST00000511248	HIRA	P54198	1017 aa	Predicted RBP	13.16	□□□□□ -0.3
PRKAA1-208	ENST00000511248	BRPF1	P55201	1214 aa	Predicted RBP	13.16	□□□□□ -0.3
PRKAA1-208	ENST00000511248	TNIP1	Q15025	636 aa		13.16	□□□□□ -0.3
PRKAA1-208	ENST00000511248	HDGFL1	Q5TGJ6	251 aa		13.16	□□□□□ -0.3
PRKAA1-208	ENST00000511248	CIAPIN1	Q6FI81	312 aa		13.16	□□□□□ -0.3
PRKAA1-208	ENST00000511248	CDC37L1	Q7L3B6	337 aa		13.16	□□□□□ -0.3
PRKAA1-208	ENST00000511248	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.16	□□□□□ -0.3
PRKAA1-208	ENST00000511248	TRPM7	Q96QT4	1865 aa		13.15	□□□□□ -0.3
PRKAA1-208	ENST00000511248	AOC2	O75106	756 aa		13.15	□□□□□ -0.3
PRKAA1-208	ENST00000511248	PLBD2	Q8NHP8	589 aa		13.15	□□□□□ -0.3
PRKAA1-208	ENST00000511248	TRPM4	Q8TD43	1214 aa		13.15	□□□□□ -0.3
PRKAA1-208	ENST00000511248	RUNDC1	Q96C34	613 aa		13.15	□□□□□ -0.3
PRKAA1-208	ENST00000511248	FAM89A	Q96GI7	184 aa		13.15	□□□□□ -0.3
PRKAA1-208	ENST00000511248	BCL2L13	Q9BXK5	485 aa		13.15	□□□□□ -0.3
PRKAA1-208	ENST00000511248	COL4A1	P02462	1669 aa		13.15	□□□□□ -0.31
PRKAA1-208	ENST00000511248	LRRC37A	A6NMS7	1700 aa		13.14	□□□□□ -0.31
PRKAA1-208	ENST00000511248	ATP5J2-PTCD1	G3V325	749 aa		13.14	□□□□□ -0.31
PRKAA1-208	ENST00000511248	HOXB7	P09629	217 aa		13.14	□□□□□ -0.31
PRKAA1-208	ENST00000511248	ANKRD13D	Q6ZTN6	518 aa		13.14	□□□□□ -0.31
PRKAA1-208	ENST00000511248	TMC4	Q7Z404	712 aa		13.14	□□□□□ -0.31
PRKAA1-208	ENST00000511248	CELF1	Q92879	486 aa	Known RBP	13.14	□□□□□ -0.31
PRKAA1-208	ENST00000511248	ISCA1	Q9BUE6	129 aa		13.14	□□□□□ -0.31
PRKAA1-208	ENST00000511248	DDX60	Q8IY21	1712 aa	Known RBP	13.13	□□□□□ -0.31
PRKAA1-208	ENST00000511248	TAF1	P21675	1872 aa		13.13	□□□□□ -0.31
PRKAA1-208	ENST00000511248		H7C1D1	291 aa		13.13	□□□□□ -0.31
PRKAA1-208	ENST00000511248	NOG	Q13253	232 aa		13.13	□□□□□ -0.31
PRKAA1-208	ENST00000511248	CCDC184	Q52MB2	194 aa		13.13	□□□□□ -0.31
PRKAA1-208	ENST00000511248	MICALL2	Q8IY33	904 aa		13.13	□□□□□ -0.31
PRKAA1-208	ENST00000511248	DBF4	Q9UBU7	674 aa	Predicted RBP	13.13	□□□□□ -0.31
PRKAA1-208	ENST00000511248	CNOT7	Q9UIV1	285 aa	Known RBP	13.13	□□□□□ -0.31
PRKAA1-208	ENST00000511248	TSKS	Q9UJT2	592 aa		13.13	□□□□□ -0.31
PRKAA1-208	ENST00000511248	ADAMTS8	Q9UP79	889 aa		13.13	□□□□□ -0.31
PRKAA1-208	ENST00000511248	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.13	□□□□□ -0.31
PRKAA1-208	ENST00000511248	GPSM2	P81274	684 aa		13.12	□□□□□ -0.31
PRKAA1-208	ENST00000511248	WDR43	Q15061	677 aa	Known RBP eCLIP	13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms