RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 RNMTO43148 476 aaKnown RBP10.74□□□□□ -0.69
SNF8-210ENST00000511214 KIF20AO95235 890 aa10.74□□□□□ -0.69
SNF8-210ENST00000511214 LIG1P18858 919 aa10.74□□□□□ -0.69
SNF8-210ENST00000511214 TOB2Q14106 344 aaPredicted RBP10.74□□□□□ -0.69
SNF8-210ENST00000511214 ANO6Q4KMQ2 910 aa10.74□□□□□ -0.69
SNF8-210ENST00000511214 NECAB1Q8N987 351 aa10.74□□□□□ -0.69
SNF8-210ENST00000511214 KCND1Q9NSA2 647 aa10.74□□□□□ -0.69
SNF8-210ENST00000511214 DACT1Q9NYF0 836 aa10.74□□□□□ -0.69
SNF8-210ENST00000511214 SASH1O94885 1247 aa10.73□□□□□ -0.69
SNF8-210ENST00000511214 HMGB1P09429 215 aaKnown RBP10.73□□□□□ -0.69
SNF8-210ENST00000511214 ZSCAN20P17040 1043 aaPredicted RBP10.73□□□□□ -0.69
SNF8-210ENST00000511214 PTGS1P23219 599 aa10.73□□□□□ -0.69
SNF8-210ENST00000511214 PLCB2Q00722 1185 aa10.73□□□□□ -0.69
SNF8-210ENST00000511214 RESTQ13127 1097 aa10.73□□□□□ -0.69
SNF8-210ENST00000511214 PPP4R3BQ5MIZ7 849 aa10.73□□□□□ -0.69
SNF8-210ENST00000511214 NBPF6Q5VWK0 638 aa10.73□□□□□ -0.69
SNF8-210ENST00000511214 NAA16Q6N069 864 aaPredicted RBP10.73□□□□□ -0.69
SNF8-210ENST00000511214 ZSCAN25Q6NSZ9 544 aa10.73□□□□□ -0.69
SNF8-210ENST00000511214 ZNF530Q6P9A1 599 aaPredicted RBP10.73□□□□□ -0.69
SNF8-210ENST00000511214 CCDC186Q7Z3E2 898 aa10.73□□□□□ -0.69
SNF8-210ENST00000511214 C17orf53Q8N3J3 647 aaPredicted RBP10.73□□□□□ -0.69
SNF8-210ENST00000511214 GTF3C6Q969F1 213 aa10.73□□□□□ -0.69
SNF8-210ENST00000511214 EAF2Q96CJ1 260 aaPredicted RBP10.73□□□□□ -0.69
SNF8-210ENST00000511214 MRFAP1L1Q96HT8 127 aa10.73□□□□□ -0.69
SNF8-210ENST00000511214 NBPF4Q96M43 638 aa10.73□□□□□ -0.69
SNF8-210ENST00000511214 LARP6Q9BRS8 491 aaKnown RBP10.73□□□□□ -0.69
SNF8-210ENST00000511214 FSD1Q9BTV5 496 aa10.73□□□□□ -0.69
SNF8-210ENST00000511214 LGR6Q9HBX8 967 aa10.73□□□□□ -0.69
SNF8-210ENST00000511214 DDX21Q9NR30 783 aaKnown RBP eCLIP10.73□□□□□ -0.69
SNF8-210ENST00000511214 SIPA1L3O60292 1781 aaPredicted RBP10.72□□□□□ -0.69
SNF8-210ENST00000511214 KIF2AO00139 706 aaPredicted RBP10.72□□□□□ -0.69
SNF8-210ENST00000511214 TAF5LO75529 589 aa10.72□□□□□ -0.69
SNF8-210ENST00000511214 ATP5JP18859 108 aa10.72□□□□□ -0.69
SNF8-210ENST00000511214 ZNF165P49910 485 aa10.72□□□□□ -0.69
SNF8-210ENST00000511214 RBM6P78332 1123 aaKnown RBP10.72□□□□□ -0.69
SNF8-210ENST00000511214 C1orf141Q5JVX7 400 aa10.72□□□□□ -0.69
SNF8-210ENST00000511214 LARP1Q6PKG0 1096 aaKnown RBP10.72□□□□□ -0.69
SNF8-210ENST00000511214 SPC24Q8NBT2 197 aa10.72□□□□□ -0.69
SNF8-210ENST00000511214 RGS22Q8NE09 1264 aa10.72□□□□□ -0.69
SNF8-210ENST00000511214 SMARCC2Q8TAQ2 1214 aa10.72□□□□□ -0.69
SNF8-210ENST00000511214 LTV1Q96GA3 475 aaPredicted RBP10.72□□□□□ -0.69
SNF8-210ENST00000511214 SUCLG2Q96I99 432 aa10.72□□□□□ -0.69
SNF8-210ENST00000511214 FAM227BQ96M60 508 aa10.72□□□□□ -0.69
SNF8-210ENST00000511214 TRIM5Q9C035 493 aa10.72□□□□□ -0.69
SNF8-210ENST00000511214 COPRSQ9NQ92 184 aa10.72□□□□□ -0.69
SNF8-210ENST00000511214 OGFRQ9NZT2 677 aa10.72□□□□□ -0.69
SNF8-210ENST00000511214 CGNQ9P2M7 1197 aaKnown RBP10.72□□□□□ -0.69
SNF8-210ENST00000511214 PHF8Q9UPP1 1060 aa10.72□□□□□ -0.69
SNF8-210ENST00000511214 SLIT3O75094 1523 aa10.72□□□□□ -0.69
SNF8-210ENST00000511214 KIF13AQ9H1H9 1805 aa10.72□□□□□ -0.69
SNF8-210ENST00000511214 A0A0D9SFI3 127 aa10.71□□□□□ -0.69
SNF8-210ENST00000511214 TUBB4AP04350 444 aa10.71□□□□□ -0.69
SNF8-210ENST00000511214 STX1AQ16623 288 aa10.71□□□□□ -0.69
SNF8-210ENST00000511214 NUTM2GQ5VZR2 741 aa10.71□□□□□ -0.69
SNF8-210ENST00000511214 LUZP1Q86V48 1076 aa10.71□□□□□ -0.69
SNF8-210ENST00000511214 KAZALD1Q96I82 304 aa10.71□□□□□ -0.69
SNF8-210ENST00000511214 NEK1Q96PY6 1258 aa10.71□□□□□ -0.69
SNF8-210ENST00000511214 RCOR1Q9UKL0 485 aa10.71□□□□□ -0.69
SNF8-210ENST00000511214 PA2G4Q9UQ80 394 aaKnown RBP10.71□□□□□ -0.69
SNF8-210ENST00000511214 ABCC6O95255 1503 aa10.7□□□□□ -0.7
SNF8-210ENST00000511214 GOLGA6L19H0YKK7 550 aa10.7□□□□□ -0.7
SNF8-210ENST00000511214 KCNQ3O43525 872 aa10.7□□□□□ -0.7
SNF8-210ENST00000511214 PFKFB2O60825 505 aa10.7□□□□□ -0.7
SNF8-210ENST00000511214 FAM193AP78312 1265 aa10.7□□□□□ -0.7
SNF8-210ENST00000511214 NEXNQ0ZGT2 675 aa10.7□□□□□ -0.7
SNF8-210ENST00000511214 IQCB1Q15051 598 aa10.7□□□□□ -0.7
SNF8-210ENST00000511214 DRC7Q8IY82 874 aa10.7□□□□□ -0.7
SNF8-210ENST00000511214 MPNDQ8N594 471 aa10.7□□□□□ -0.7
SNF8-210ENST00000511214 USHBP1Q8N6Y0 703 aa10.7□□□□□ -0.7
SNF8-210ENST00000511214 BICD2Q8TD16 824 aa10.7□□□□□ -0.7
SNF8-210ENST00000511214 PGBD1Q96JS3 809 aa10.7□□□□□ -0.7
SNF8-210ENST00000511214 ZNF396Q96N95 335 aaPredicted RBP10.7□□□□□ -0.7
SNF8-210ENST00000511214 BICC1Q9H694 974 aaKnown RBP10.7□□□□□ -0.7
SNF8-210ENST00000511214 CLIP2Q9UDT6 1046 aa10.7□□□□□ -0.7
SNF8-210ENST00000511214 SH3TC1Q8TE82 1336 aa10.69□□□□□ -0.7
SNF8-210ENST00000511214 H3BQV1 296 aa10.69□□□□□ -0.7
SNF8-210ENST00000511214 TNNT1P13805 278 aa10.69□□□□□ -0.7
SNF8-210ENST00000511214 GABPB1Q06547 395 aaPredicted RBP10.69□□□□□ -0.7
SNF8-210ENST00000511214 NCBP1Q09161 790 aaKnown RBP10.69□□□□□ -0.7
SNF8-210ENST00000511214 MKRN4PQ13434 485 aaPredicted RBP10.69□□□□□ -0.7
SNF8-210ENST00000511214 CAMK4Q16566 473 aa10.69□□□□□ -0.7
SNF8-210ENST00000511214 IFFO2Q5TF58 517 aa10.69□□□□□ -0.7
SNF8-210ENST00000511214 FERMT3Q86UX7 667 aa10.69□□□□□ -0.7
SNF8-210ENST00000511214 FBXL16Q8N461 479 aa10.69□□□□□ -0.7
SNF8-210ENST00000511214 CCDC112Q8NEF3 446 aa10.69□□□□□ -0.7
SNF8-210ENST00000511214 BRF1Q92994 677 aa10.69□□□□□ -0.7
SNF8-210ENST00000511214 BOLA2Q9H3K6 86 aa10.69□□□□□ -0.7
SNF8-210ENST00000511214 ANO10Q9NW15 660 aa10.69□□□□□ -0.7
SNF8-210ENST00000511214 TMEM94Q12767 1356 aa10.68□□□□□ -0.7
SNF8-210ENST00000511214 NR1I2O75469 434 aa10.68□□□□□ -0.7
SNF8-210ENST00000511214 KCNJ6P48051 423 aa10.68□□□□□ -0.7
SNF8-210ENST00000511214 GSDMDP57764 484 aa10.68□□□□□ -0.7
SNF8-210ENST00000511214 ATP2B3Q16720 1220 aa10.68□□□□□ -0.7
SNF8-210ENST00000511214 CWF19L2Q2TBE0 894 aaKnown RBP10.68□□□□□ -0.7
SNF8-210ENST00000511214 RABL6Q3YEC7 729 aaPredicted RBP10.68□□□□□ -0.7
SNF8-210ENST00000511214 SLFNL1Q499Z3 407 aa10.68□□□□□ -0.7
SNF8-210ENST00000511214 MCMDC2Q4G0Z9 681 aa10.68□□□□□ -0.7
SNF8-210ENST00000511214 TAF3Q5VWG9 929 aa10.68□□□□□ -0.7
SNF8-210ENST00000511214 CREBRFQ8IUR6 639 aa10.68□□□□□ -0.7
SNF8-210ENST00000511214 LRRC8AQ8IWT6 810 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms