RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 NBPF26B4DH59 902 aa11.38□□□□□ -0.59
PDPN-209ENST00000510906 POLRMTO00411 1230 aaKnown RBP11.38□□□□□ -0.59
PDPN-209ENST00000510906 A1BGP04217 495 aa11.38□□□□□ -0.59
PDPN-209ENST00000510906 NEFMP07197 916 aa11.38□□□□□ -0.59
PDPN-209ENST00000510906 TM4SF1P30408 202 aa11.38□□□□□ -0.59
PDPN-209ENST00000510906 EIF5P55010 431 aaKnown RBP11.38□□□□□ -0.59
PDPN-209ENST00000510906 TEX13AQ9BXU3 409 aaPredicted RBP11.38□□□□□ -0.59
PDPN-209ENST00000510906 SIPA1L3O60292 1781 aaPredicted RBP11.38□□□□□ -0.59
PDPN-209ENST00000510906 PRAMEF22A3QJZ6 481 aa11.37□□□□□ -0.59
PDPN-209ENST00000510906 DPEP1P16444 411 aa11.37□□□□□ -0.59
PDPN-209ENST00000510906 TGFB2P61812 414 aa11.37□□□□□ -0.59
PDPN-209ENST00000510906 NFIXQ14938 502 aa11.37□□□□□ -0.59
PDPN-209ENST00000510906 NFE2L2Q16236 605 aa11.37□□□□□ -0.59
PDPN-209ENST00000510906 MYSM1Q5VVJ2 828 aa11.37□□□□□ -0.59
PDPN-209ENST00000510906 NUDT18Q6ZVK8 323 aa11.37□□□□□ -0.59
PDPN-209ENST00000510906 THUMPD2Q9BTF0 503 aaKnown RBP11.37□□□□□ -0.59
PDPN-209ENST00000510906 MIS18AQ9NYP9 233 aa11.37□□□□□ -0.59
PDPN-209ENST00000510906 ZNF330Q9Y3S2 320 aaPredicted RBP11.37□□□□□ -0.59
PDPN-209ENST00000510906 MYBBP1AQ9BQG0 1328 aaKnown RBP11.36□□□□□ -0.59
PDPN-209ENST00000510906 PIP4K2AP48426 406 aaPredicted RBP11.36□□□□□ -0.59
PDPN-209ENST00000510906 TAF7Q15545 349 aaPredicted RBP11.36□□□□□ -0.59
PDPN-209ENST00000510906 TATDN2Q93075 761 aa11.36□□□□□ -0.59
PDPN-209ENST00000510906 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.36□□□□□ -0.59
PDPN-209ENST00000510906 TBC1D2BQ9UPU7 963 aa11.36□□□□□ -0.59
PDPN-209ENST00000510906 USP16Q9Y5T5 823 aa11.36□□□□□ -0.59
PDPN-209ENST00000510906 MAPK8IP3Q9UPT6 1336 aa11.35□□□□□ -0.59
PDPN-209ENST00000510906 A0A087WZG4 1122 aa11.35□□□□□ -0.59
PDPN-209ENST00000510906 SNRPA1P09661 255 aaKnown RBP11.35□□□□□ -0.59
PDPN-209ENST00000510906 CD46P15529 392 aa11.35□□□□□ -0.59
PDPN-209ENST00000510906 KCNA3P22001 575 aa11.35□□□□□ -0.59
PDPN-209ENST00000510906 DNAJB2P25686 324 aa11.35□□□□□ -0.59
PDPN-209ENST00000510906 IL6STP40189 918 aaPredicted RBP11.35□□□□□ -0.59
PDPN-209ENST00000510906 BICDL1Q6ZP65 573 aa11.35□□□□□ -0.59
PDPN-209ENST00000510906 TMEM134Q9H6X4 195 aa11.35□□□□□ -0.59
PDPN-209ENST00000510906 BCS1LQ9Y276 419 aa11.35□□□□□ -0.59
PDPN-209ENST00000510906 KIAA1551Q9HCM1 1747 aa11.35□□□□□ -0.59
PDPN-209ENST00000510906 DIXDC1Q155Q3 683 aa11.34□□□□□ -0.59
PDPN-209ENST00000510906 PACS2Q86VP3 889 aa11.34□□□□□ -0.59
PDPN-209ENST00000510906 KCNK17Q96T54 332 aa11.34□□□□□ -0.59
PDPN-209ENST00000510906 TBC1D2Q9BYX2 928 aa11.34□□□□□ -0.59
PDPN-209ENST00000510906 PNNQ9H307 717 aaKnown RBP11.34□□□□□ -0.59
PDPN-209ENST00000510906 CHD4Q14839 1912 aa11.33□□□□□ -0.6
PDPN-209ENST00000510906 KIF13BQ9NQT8 1826 aa11.33□□□□□ -0.6
PDPN-209ENST00000510906 SERPINB2P05120 415 aa11.33□□□□□ -0.6
PDPN-209ENST00000510906 CHRNA5P30532 468 aa11.33□□□□□ -0.6
PDPN-209ENST00000510906 PROX2Q3B8N5 592 aa11.33□□□□□ -0.6
PDPN-209ENST00000510906 TBC1D9BQ66K14 1250 aa11.33□□□□□ -0.6
PDPN-209ENST00000510906 PRKRIP1Q9H875 184 aaPredicted RBP11.33□□□□□ -0.6
PDPN-209ENST00000510906 PNMA3Q9UL41 463 aa11.33□□□□□ -0.6
PDPN-209ENST00000510906 CAMTA2O94983 1202 aa11.32□□□□□ -0.6
PDPN-209ENST00000510906 HSPA6P17066 643 aa11.32□□□□□ -0.6
PDPN-209ENST00000510906 CLK2P49760 499 aaKnown RBP11.32□□□□□ -0.6
PDPN-209ENST00000510906 RIPK4P57078 832 aa11.32□□□□□ -0.6
PDPN-209ENST00000510906 NBPF10Q6P3W6 841 aaKnown RBP11.32□□□□□ -0.6
PDPN-209ENST00000510906 SULF1Q8IWU6 871 aa11.32□□□□□ -0.6
PDPN-209ENST00000510906 CCDC146Q8IYE0 955 aa11.32□□□□□ -0.6
PDPN-209ENST00000510906 NBPF15Q8N660 670 aa11.32□□□□□ -0.6
PDPN-209ENST00000510906 PROCA1Q8NCQ7 364 aaPredicted RBP11.32□□□□□ -0.6
PDPN-209ENST00000510906 PNISRQ8TF01 805 aaKnown RBP11.32□□□□□ -0.6
PDPN-209ENST00000510906 ZBED2Q9BTP6 218 aa11.32□□□□□ -0.6
PDPN-209ENST00000510906 N4BP2Q86UW6 1770 aaPredicted RBP11.31□□□□□ -0.6
PDPN-209ENST00000510906 CARMIL3Q8ND23 1372 aa11.31□□□□□ -0.6
PDPN-209ENST00000510906 ZEB1P37275 1124 aaPredicted RBP11.31□□□□□ -0.6
PDPN-209ENST00000510906 TMPOP42166 694 aaKnown RBP11.31□□□□□ -0.6
PDPN-209ENST00000510906 NPM2Q86SE8 214 aaKnown RBP11.31□□□□□ -0.6
PDPN-209ENST00000510906 DZIP3Q86Y13 1208 aaKnown RBP11.31□□□□□ -0.6
PDPN-209ENST00000510906 PIM2Q9P1W9 311 aa11.31□□□□□ -0.6
PDPN-209ENST00000510906 RRP7AQ9Y3A4 280 aaKnown RBP11.31□□□□□ -0.6
PDPN-209ENST00000510906 ATP10DQ9P241 1426 aa11.31□□□□□ -0.6
PDPN-209ENST00000510906 ADCY9O60503 1353 aa11.3□□□□□ -0.6
PDPN-209ENST00000510906 EIF4A1P60842 406 aaKnown RBP11.3□□□□□ -0.6
PDPN-209ENST00000510906 MCM6Q14566 821 aa11.3□□□□□ -0.6
PDPN-209ENST00000510906 WDR43Q15061 677 aaKnown RBP eCLIP11.3□□□□□ -0.6
PDPN-209ENST00000510906 DALRD3Q5D0E6 543 aaKnown RBP11.3□□□□□ -0.6
PDPN-209ENST00000510906 ARHGAP27Q6ZUM4 889 aa11.3□□□□□ -0.6
PDPN-209ENST00000510906 CCDC24Q8N4L8 307 aa11.3□□□□□ -0.6
PDPN-209ENST00000510906 POLR3EQ9NVU0 708 aa11.3□□□□□ -0.6
PDPN-209ENST00000510906 PRR5LQ6MZQ0 368 aa11.29□□□□□ -0.6
PDPN-209ENST00000510906 SPIRE2Q8WWL2 714 aa11.29□□□□□ -0.6
PDPN-209ENST00000510906 TSPYL4Q9UJ04 414 aa11.29□□□□□ -0.6
PDPN-209ENST00000510906 ADAMTS8Q9UP79 889 aa11.29□□□□□ -0.6
PDPN-209ENST00000510906 SCN7AQ01118 1682 aa11.29□□□□□ -0.6
PDPN-209ENST00000510906 TUSC1Q2TAM9 212 aa11.28□□□□□ -0.6
PDPN-209ENST00000510906 C2CD5Q86YS7 1000 aa11.28□□□□□ -0.6
PDPN-209ENST00000510906 TNS4Q8IZW8 715 aa11.28□□□□□ -0.6
PDPN-209ENST00000510906 DNAJC5GQ8N7S2 189 aa11.28□□□□□ -0.6
PDPN-209ENST00000510906 ZNF526Q8TF50 670 aaPredicted RBP11.28□□□□□ -0.6
PDPN-209ENST00000510906 RUNDC1Q96C34 613 aa11.28□□□□□ -0.6
PDPN-209ENST00000510906 SETDB2Q96T68 719 aa11.28□□□□□ -0.6
PDPN-209ENST00000510906 SLC4A5Q9BY07 1137 aa11.28□□□□□ -0.6
PDPN-209ENST00000510906 DLG5Q8TDM6 1919 aa11.28□□□□□ -0.6
PDPN-209ENST00000510906 NRXN2Q9P2S2 1712 aa11.27□□□□□ -0.61
PDPN-209ENST00000510906 KDM3BQ7LBC6 1761 aa11.27□□□□□ -0.61
PDPN-209ENST00000510906 LMOD3Q0VAK6 560 aa11.27□□□□□ -0.61
PDPN-209ENST00000510906 POTEEQ6S8J3 1075 aa11.27□□□□□ -0.61
PDPN-209ENST00000510906 NGEFQ8N5V2 710 aa11.27□□□□□ -0.61
PDPN-209ENST00000510906 AFDNP55196 1824 aaKnown RBP11.26□□□□□ -0.61
PDPN-209ENST00000510906 H0YIN7 160 aa11.26□□□□□ -0.61
PDPN-209ENST00000510906 SMAPO00193 183 aa11.26□□□□□ -0.61
PDPN-209ENST00000510906 CLEC4GQ6UXB4 293 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms