RNA–Protein interactions for RNA: ENST00000510825.5

LDB2-213, Transcript of LIM domain binding 2, humanhuman

TSL 4

Gene LDB2, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-213ENST00000510825 SF3B3Q15393 1217 aaKnown RBP17.01■□□□□ 0.31
LDB2-213ENST00000510825 RABL6Q3YEC7 729 aaPredicted RBP17.01■□□□□ 0.31
LDB2-213ENST00000510825 EPHA10Q5JZY3 1008 aa17.01■□□□□ 0.31
LDB2-213ENST00000510825 DDX46Q7L014 1031 aaKnown RBP17.01■□□□□ 0.31
LDB2-213ENST00000510825 TTLL11Q8NHH1 800 aa17.01■□□□□ 0.31
LDB2-213ENST00000510825 PPP4R2Q9NY27 417 aa17.01■□□□□ 0.31
LDB2-213ENST00000510825 H0YIN7 160 aa17■□□□□ 0.31
LDB2-213ENST00000510825 RBM17Q96I25 401 aaKnown RBP17■□□□□ 0.31
LDB2-213ENST00000510825 KAZALD1Q96I82 304 aa17■□□□□ 0.31
LDB2-213ENST00000510825 CCDC85AQ96PX6 553 aaPredicted RBP17■□□□□ 0.31
LDB2-213ENST00000510825 CDC5LQ99459 802 aaKnown RBP17■□□□□ 0.31
LDB2-213ENST00000510825 PPP1R1BQ9UD71 204 aaPredicted RBP17■□□□□ 0.31
LDB2-213ENST00000510825 PCDHB15Q9Y5E8 787 aa17■□□□□ 0.31
LDB2-213ENST00000510825 KLHL34Q8N239 644 aa16.99■□□□□ 0.31
LDB2-213ENST00000510825 NPR1P16066 1061 aa16.98■□□□□ 0.31
LDB2-213ENST00000510825 ITGA6P23229 1130 aa16.98■□□□□ 0.31
LDB2-213ENST00000510825 OS9Q13438 667 aaPredicted RBP16.98■□□□□ 0.31
LDB2-213ENST00000510825 FAM161AQ3B820 660 aa16.98■□□□□ 0.31
LDB2-213ENST00000510825 HSP90AB4PQ58FF6 505 aa16.98■□□□□ 0.31
LDB2-213ENST00000510825 C2CD5Q86YS7 1000 aa16.98■□□□□ 0.31
LDB2-213ENST00000510825 TMX4Q9H1E5 349 aaPredicted RBP16.98■□□□□ 0.31
LDB2-213ENST00000510825 GREM2Q9H772 168 aa16.98■□□□□ 0.31
LDB2-213ENST00000510825 ZBTB47Q9UFB7 747 aaPredicted RBP16.98■□□□□ 0.31
LDB2-213ENST00000510825 GTF3C3Q9Y5Q9 886 aa16.98■□□□□ 0.31
LDB2-213ENST00000510825 RTL9Q8NET4 1388 aa16.98■□□□□ 0.31
LDB2-213ENST00000510825 IGHMBP2P38935 993 aaKnown RBP16.97■□□□□ 0.31
LDB2-213ENST00000510825 HDAC1Q13547 482 aaPredicted RBP16.97■□□□□ 0.31
LDB2-213ENST00000510825 ANKRD18AQ8IVF6 992 aa16.97■□□□□ 0.31
LDB2-213ENST00000510825 SSH3Q8TE77 659 aa16.97■□□□□ 0.31
LDB2-213ENST00000510825 NRXN2Q9P2S2 1712 aa16.96■□□□□ 0.31
LDB2-213ENST00000510825 PNMA6EA0A0J9YXQ4 647 aa16.96■□□□□ 0.31
LDB2-213ENST00000510825 ALDH1B1P30837 517 aa16.96■□□□□ 0.31
LDB2-213ENST00000510825 PTGER2P43116 358 aa16.96■□□□□ 0.31
LDB2-213ENST00000510825 G3BP1Q13283 466 aaKnown RBP eCLIP16.96■□□□□ 0.31
LDB2-213ENST00000510825 CRY2Q49AN0 593 aa16.96■□□□□ 0.31
LDB2-213ENST00000510825 ZNF622Q969S3 477 aaKnown RBP eCLIP16.96■□□□□ 0.31
LDB2-213ENST00000510825 MPHOSPH8Q99549 860 aa16.96■□□□□ 0.31
LDB2-213ENST00000510825 CD2APQ9Y5K6 639 aa16.96■□□□□ 0.31
LDB2-213ENST00000510825 LAMB2P55268 1798 aa16.96■□□□□ 0.31
LDB2-213ENST00000510825 KLRG2A4D1S0 409 aaPredicted RBP16.95■□□□□ 0.3
LDB2-213ENST00000510825 SURF6O75683 361 aaKnown RBP16.95■□□□□ 0.3
LDB2-213ENST00000510825 SRGNP10124 158 aa16.95■□□□□ 0.3
LDB2-213ENST00000510825 TGFB2P61812 414 aa16.95■□□□□ 0.3
LDB2-213ENST00000510825 POLA2Q14181 598 aa16.95■□□□□ 0.3
LDB2-213ENST00000510825 C3orf67Q6ZVT6 689 aa16.95■□□□□ 0.3
LDB2-213ENST00000510825 MASTLQ96GX5 879 aa16.95■□□□□ 0.3
LDB2-213ENST00000510825 SGIP1Q9BQI5 828 aa16.95■□□□□ 0.3
LDB2-213ENST00000510825 CNNM1Q9NRU3 951 aa16.95■□□□□ 0.3
LDB2-213ENST00000510825 C10orf71Q711Q0 1435 aa16.95■□□□□ 0.3
LDB2-213ENST00000510825 DDX60Q8IY21 1712 aaKnown RBP16.94■□□□□ 0.3
LDB2-213ENST00000510825 HOXA10P31260 410 aaPredicted RBP16.94■□□□□ 0.3
LDB2-213ENST00000510825 RPS8P62241 208 aaKnown RBP16.94■□□□□ 0.3
LDB2-213ENST00000510825 STYK1Q6J9G0 422 aa16.94■□□□□ 0.3
LDB2-213ENST00000510825 LDHAL6AQ6ZMR3 332 aa16.94■□□□□ 0.3
LDB2-213ENST00000510825 ERC1Q8IUD2 1116 aa16.94■□□□□ 0.3
LDB2-213ENST00000510825 SIRT2Q8IXJ6 389 aa16.94■□□□□ 0.3
LDB2-213ENST00000510825 CNKSR1Q969H4 720 aa16.94■□□□□ 0.3
LDB2-213ENST00000510825 GCC1Q96CN9 775 aa16.94■□□□□ 0.3
LDB2-213ENST00000510825 CRAMP1Q96RY5 1269 aa16.94■□□□□ 0.3
LDB2-213ENST00000510825 FBXO3Q9UK99 471 aa16.94■□□□□ 0.3
LDB2-213ENST00000510825 BBOX1O75936 387 aa16.93■□□□□ 0.3
LDB2-213ENST00000510825 GRAPQ13588 217 aa16.93■□□□□ 0.3
LDB2-213ENST00000510825 TMC4Q7Z404 712 aa16.93■□□□□ 0.3
LDB2-213ENST00000510825 GRAPLQ8TC17 118 aaPredicted RBP16.93■□□□□ 0.3
LDB2-213ENST00000510825 SIL1Q9H173 461 aa16.93■□□□□ 0.3
LDB2-213ENST00000510825 COPRSQ9NQ92 184 aa16.93■□□□□ 0.3
LDB2-213ENST00000510825 SEC31BQ9NQW1 1179 aa16.93■□□□□ 0.3
LDB2-213ENST00000510825 MYH3P11055 1940 aa16.93■□□□□ 0.3
LDB2-213ENST00000510825 RAB11FIP3O75154 756 aa16.92■□□□□ 0.3
LDB2-213ENST00000510825 PTPN12Q05209 780 aaKnown RBP16.92■□□□□ 0.3
LDB2-213ENST00000510825 CENPQQ7L2Z9 268 aaPredicted RBP16.92■□□□□ 0.3
LDB2-213ENST00000510825 CIAO1O76071 339 aa16.91■□□□□ 0.3
LDB2-213ENST00000510825 CHRNA5P30532 468 aa16.91■□□□□ 0.3
LDB2-213ENST00000510825 IL15P40933 162 aaPredicted RBP16.91■□□□□ 0.3
LDB2-213ENST00000510825 B4GALNT3Q6L9W6 998 aa16.91■□□□□ 0.3
LDB2-213ENST00000510825 ZNF594Q96JF6 807 aaPredicted RBP16.91■□□□□ 0.3
LDB2-213ENST00000510825 DCTPP1Q9H773 170 aa16.91■□□□□ 0.3
LDB2-213ENST00000510825 NOP58Q9Y2X3 529 aaKnown RBP16.91■□□□□ 0.3
LDB2-213ENST00000510825 A0A0G2JLW4 131 aa16.9■□□□□ 0.3
LDB2-213ENST00000510825 EYA2O00167 538 aa16.9■□□□□ 0.3
LDB2-213ENST00000510825 RFX5P48382 616 aaPredicted RBP16.9■□□□□ 0.3
LDB2-213ENST00000510825 KLHDC4Q8TBB5 520 aa16.9■□□□□ 0.3
LDB2-213ENST00000510825 BSDC1Q9NW68 430 aaPredicted RBP16.9■□□□□ 0.3
LDB2-213ENST00000510825 PIM2Q9P1W9 311 aa16.9■□□□□ 0.3
LDB2-213ENST00000510825 PA2G4Q9UQ80 394 aaKnown RBP16.9■□□□□ 0.3
LDB2-213ENST00000510825 EXOC6BQ9Y2D4 811 aa16.9■□□□□ 0.3
LDB2-213ENST00000510825 TNRC6CQ9HCJ0 1690 aaKnown RBP16.9■□□□□ 0.3
LDB2-213ENST00000510825 APBB1O00213 710 aa16.89■□□□□ 0.29
LDB2-213ENST00000510825 PPEF1O14829 653 aaPredicted RBP16.89■□□□□ 0.29
LDB2-213ENST00000510825 IGHDP01880 384 aa16.89■□□□□ 0.29
LDB2-213ENST00000510825 DPEP1P16444 411 aa16.89■□□□□ 0.29
LDB2-213ENST00000510825 METTL24Q5JXM2 366 aa16.89■□□□□ 0.29
LDB2-213ENST00000510825 TTLL6Q8N841 843 aa16.89■□□□□ 0.29
LDB2-213ENST00000510825 CELF1Q92879 486 aaKnown RBP16.89■□□□□ 0.29
LDB2-213ENST00000510825 CEP126Q9P2H0 1117 aa16.89■□□□□ 0.29
LDB2-213ENST00000510825 MROH5Q6ZUA9 1318 aa16.89■□□□□ 0.29
LDB2-213ENST00000510825 KIF1BPQ96EK5 621 aa16.88■□□□□ 0.29
LDB2-213ENST00000510825 LRRCC1Q9C099 1032 aa16.88■□□□□ 0.29
LDB2-213ENST00000510825 ANKRD2Q9GZV1 360 aa16.88■□□□□ 0.29
LDB2-213ENST00000510825 ANKRD31Q8N7Z5 1873 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms