RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 SMC3Q9UQE7 1217 aa19.87■□□□□ 0.77
CLMAT3-201ENST00000510576 HAUS7Q99871 368 aa19.86■□□□□ 0.77
CLMAT3-201ENST00000510576 COL14A1Q05707 1796 aaKnown RBP19.86■□□□□ 0.77
CLMAT3-201ENST00000510576 DNAJC2Q99543 621 aaKnown RBP19.86■□□□□ 0.77
CLMAT3-201ENST00000510576 TCHHQ07283 1943 aa19.85■□□□□ 0.77
CLMAT3-201ENST00000510576 LARGE1O95461 756 aa19.85■□□□□ 0.77
CLMAT3-201ENST00000510576 ZNF589Q86UQ0 364 aaPredicted RBP19.85■□□□□ 0.77
CLMAT3-201ENST00000510576 GPR108Q9NPR9 543 aa19.85■□□□□ 0.77
CLMAT3-201ENST00000510576 IL15P40933 162 aaPredicted RBP19.84■□□□□ 0.77
CLMAT3-201ENST00000510576 ATG9AQ7Z3C6 839 aa19.84■□□□□ 0.77
CLMAT3-201ENST00000510576 TEX13AQ9BXU3 409 aaPredicted RBP19.84■□□□□ 0.77
CLMAT3-201ENST00000510576 HMG20BQ9P0W2 317 aa19.84■□□□□ 0.77
CLMAT3-201ENST00000510576 CCDC83Q8IWF9 413 aa19.84■□□□□ 0.77
CLMAT3-201ENST00000510576 VSIG10Q8N0Z9 540 aa19.84■□□□□ 0.77
CLMAT3-201ENST00000510576 BTG4Q9NY30 223 aa19.84■□□□□ 0.77
CLMAT3-201ENST00000510576 TAF5LO75529 589 aa19.83■□□□□ 0.77
CLMAT3-201ENST00000510576 ISCA1Q9BUE6 129 aa19.83■□□□□ 0.77
CLMAT3-201ENST00000510576 RBM27Q9P2N5 1060 aaKnown RBP19.83■□□□□ 0.77
CLMAT3-201ENST00000510576 STX6O43752 255 aa19.83■□□□□ 0.76
CLMAT3-201ENST00000510576 ZSCAN22P10073 491 aaPredicted RBP19.83■□□□□ 0.76
CLMAT3-201ENST00000510576 TCIRG1Q13488 830 aa19.83■□□□□ 0.76
CLMAT3-201ENST00000510576 BLOC1S2Q6QNY1 142 aa19.83■□□□□ 0.76
CLMAT3-201ENST00000510576 KIF6Q6ZMV9 814 aa19.83■□□□□ 0.76
CLMAT3-201ENST00000510576 NEUROD6Q96NK8 337 aa19.83■□□□□ 0.76
CLMAT3-201ENST00000510576 ATG3Q9NT62 314 aa19.83■□□□□ 0.76
CLMAT3-201ENST00000510576 ZNF330Q9Y3S2 320 aaPredicted RBP19.83■□□□□ 0.76
CLMAT3-201ENST00000510576 ZNF609O15014 1411 aa19.82■□□□□ 0.76
CLMAT3-201ENST00000510576 PLCH1Q4KWH8 1693 aa19.82■□□□□ 0.76
CLMAT3-201ENST00000510576 EYA2O00167 538 aa19.82■□□□□ 0.76
CLMAT3-201ENST00000510576 NASPP49321 788 aaPredicted RBP19.82■□□□□ 0.76
CLMAT3-201ENST00000510576 PIGBQ92521 554 aa19.82■□□□□ 0.76
CLMAT3-201ENST00000510576 ASAP1Q9ULH1 1129 aa19.82■□□□□ 0.76
CLMAT3-201ENST00000510576 NDUFB9Q9Y6M9 179 aa19.82■□□□□ 0.76
CLMAT3-201ENST00000510576 CIAO1O76071 339 aa19.81■□□□□ 0.76
CLMAT3-201ENST00000510576 SYT1P21579 422 aa19.81■□□□□ 0.76
CLMAT3-201ENST00000510576 ANKRD1Q15327 319 aa19.81■□□□□ 0.76
CLMAT3-201ENST00000510576 DNAJC10Q8IXB1 793 aa19.81■□□□□ 0.76
CLMAT3-201ENST00000510576 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.81■□□□□ 0.76
CLMAT3-201ENST00000510576 SPEF2Q9C093 1822 aa19.81■□□□□ 0.76
CLMAT3-201ENST00000510576 TSGA10IPQ3SY00 556 aa19.81■□□□□ 0.76
CLMAT3-201ENST00000510576 USPL1Q5W0Q7 1092 aa19.81■□□□□ 0.76
CLMAT3-201ENST00000510576 DDX46Q7L014 1031 aaKnown RBP19.81■□□□□ 0.76
CLMAT3-201ENST00000510576 KBTBD3Q8NAB2 608 aa19.81■□□□□ 0.76
CLMAT3-201ENST00000510576 TMEM63CQ9P1W3 806 aa19.81■□□□□ 0.76
CLMAT3-201ENST00000510576 CCDC9Q9Y3X0 531 aaKnown RBP19.81■□□□□ 0.76
CLMAT3-201ENST00000510576 WNK3Q9BYP7 1800 aa19.8■□□□□ 0.76
CLMAT3-201ENST00000510576 PALLDQ8WX93 1383 aa19.8■□□□□ 0.76
CLMAT3-201ENST00000510576 DISP2A7MBM2 1401 aa19.8■□□□□ 0.76
CLMAT3-201ENST00000510576 LRP6O75581 1613 aa19.8■□□□□ 0.76
CLMAT3-201ENST00000510576 STARD3NLO95772 234 aa19.8■□□□□ 0.76
CLMAT3-201ENST00000510576 RPS6KB1P23443 525 aa19.8■□□□□ 0.76
CLMAT3-201ENST00000510576 GJB2P29033 226 aa19.8■□□□□ 0.76
CLMAT3-201ENST00000510576 KRT32Q14532 448 aa19.8■□□□□ 0.76
CLMAT3-201ENST00000510576 ME3Q16798 604 aa19.8■□□□□ 0.76
CLMAT3-201ENST00000510576 FOXD4L6Q3SYB3 417 aaPredicted RBP19.8■□□□□ 0.76
CLMAT3-201ENST00000510576 MCMDC2Q4G0Z9 681 aa19.8■□□□□ 0.76
CLMAT3-201ENST00000510576 FOXD4L3Q6VB84 417 aaPredicted RBP19.8■□□□□ 0.76
CLMAT3-201ENST00000510576 ALDH8A1Q9H2A2 487 aaPredicted RBP19.8■□□□□ 0.76
CLMAT3-201ENST00000510576 NSFL1CQ9UNZ2 370 aaKnown RBP19.8■□□□□ 0.76
CLMAT3-201ENST00000510576 TRIM28Q13263 835 aaKnown RBP19.79■□□□□ 0.76
CLMAT3-201ENST00000510576 LRRC24Q50LG9 513 aa19.79■□□□□ 0.76
CLMAT3-201ENST00000510576 ZNF594Q96JF6 807 aaPredicted RBP19.79■□□□□ 0.76
CLMAT3-201ENST00000510576 U3KPZ7 1027 aaPredicted RBP19.79■□□□□ 0.76
CLMAT3-201ENST00000510576 ANKRD36CQ5JPF3 1778 aa19.79■□□□□ 0.76
CLMAT3-201ENST00000510576 ANP32BQ92688 251 aaKnown RBP19.79■□□□□ 0.76
CLMAT3-201ENST00000510576 TPCN1Q9ULQ1 816 aa19.79■□□□□ 0.76
CLMAT3-201ENST00000510576 ATP6V1DQ9Y5K8 247 aa19.79■□□□□ 0.76
CLMAT3-201ENST00000510576 SH3TC1Q8TE82 1336 aa19.79■□□□□ 0.76
CLMAT3-201ENST00000510576 F13A1P00488 732 aa19.78■□□□□ 0.76
CLMAT3-201ENST00000510576 TIMM10P62072 90 aa19.78■□□□□ 0.76
CLMAT3-201ENST00000510576 CCDC57Q2TAC2 916 aa19.78■□□□□ 0.76
CLMAT3-201ENST00000510576 TICAM2Q86XR7 235 aa19.78■□□□□ 0.76
CLMAT3-201ENST00000510576 TMEM87AQ8NBN3 555 aa19.78■□□□□ 0.76
CLMAT3-201ENST00000510576 SYAP1Q96A49 352 aaPredicted RBP19.78■□□□□ 0.76
CLMAT3-201ENST00000510576 PAG1Q9NWQ8 432 aa19.78■□□□□ 0.76
CLMAT3-201ENST00000510576 AHDC1Q5TGY3 1603 aaPredicted RBP19.77■□□□□ 0.76
CLMAT3-201ENST00000510576 COL22A1Q8NFW1 1626 aaPredicted RBP19.77■□□□□ 0.76
CLMAT3-201ENST00000510576 PCCAP05165 728 aaPredicted RBP19.77■□□□□ 0.76
CLMAT3-201ENST00000510576 CCDC173Q0VFZ6 552 aa19.77■□□□□ 0.76
CLMAT3-201ENST00000510576 ST3GAL1Q11201 340 aa19.77■□□□□ 0.76
CLMAT3-201ENST00000510576 CCDC129Q6ZRS4 1044 aa19.77■□□□□ 0.76
CLMAT3-201ENST00000510576 USP48Q86UV5 1035 aa19.77■□□□□ 0.76
CLMAT3-201ENST00000510576 COL16A1Q07092 1604 aaPredicted RBP19.77■□□□□ 0.76
CLMAT3-201ENST00000510576 GOLIM4O00461 696 aa19.77■□□□□ 0.75
CLMAT3-201ENST00000510576 LRSAM1Q6UWE0 723 aa19.77■□□□□ 0.75
CLMAT3-201ENST00000510576 NECAB1Q8N987 351 aa19.77■□□□□ 0.75
CLMAT3-201ENST00000510576 GDPD2Q9HCC8 539 aa19.77■□□□□ 0.75
CLMAT3-201ENST00000510576 TAF6LQ9Y6J9 622 aa19.77■□□□□ 0.75
CLMAT3-201ENST00000510576 KAT6BQ8WYB5 2073 aa19.77■□□□□ 0.75
CLMAT3-201ENST00000510576 A0A1B0GUL7 405 aa19.76■□□□□ 0.75
CLMAT3-201ENST00000510576 SEC62Q99442 399 aaKnown RBP19.76■□□□□ 0.75
CLMAT3-201ENST00000510576 RRAGDQ9NQL2 400 aaPredicted RBP19.76■□□□□ 0.75
CLMAT3-201ENST00000510576 CEP126Q9P2H0 1117 aa19.76■□□□□ 0.75
CLMAT3-201ENST00000510576 FBXO3Q9UK99 471 aa19.76■□□□□ 0.75
CLMAT3-201ENST00000510576 MAP3K15Q6ZN16 1313 aa19.76■□□□□ 0.75
CLMAT3-201ENST00000510576 BCL9O00512 1426 aa19.75■□□□□ 0.75
CLMAT3-201ENST00000510576 PRIM1P49642 420 aaKnown RBP19.75■□□□□ 0.75
CLMAT3-201ENST00000510576 LAMA4Q16363 1823 aa19.75■□□□□ 0.75
CLMAT3-201ENST00000510576 TRIM44Q96DX7 344 aaPredicted RBP19.75■□□□□ 0.75
CLMAT3-201ENST00000510576 PUS3Q9BZE2 481 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms