RNA–Protein interactions for RNA: ENST00000510500.5

CAST-232, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-232ENST00000510500 CCDC89Q8N998 374 aa9.17□□□□□ -0.94
CAST-232ENST00000510500 RELTQ969Z4 430 aa9.17□□□□□ -0.94
CAST-232ENST00000510500 GBP4Q96PP9 640 aa9.17□□□□□ -0.94
CAST-232ENST00000510500 UNC45AQ9H3U1 944 aa9.17□□□□□ -0.94
CAST-232ENST00000510500 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.17□□□□□ -0.94
CAST-232ENST00000510500 TYW1Q9NV66 732 aaKnown RBP9.17□□□□□ -0.94
CAST-232ENST00000510500 MAPKBP1O60336 1514 aa9.17□□□□□ -0.94
CAST-232ENST00000510500 TMEM238LA0A1B0GVL6 79 aa9.17□□□□□ -0.94
CAST-232ENST00000510500 PLIN1O60240 522 aa9.17□□□□□ -0.94
CAST-232ENST00000510500 MAP2K2P36507 400 aa9.17□□□□□ -0.94
CAST-232ENST00000510500 GNALP38405 381 aa9.17□□□□□ -0.94
CAST-232ENST00000510500 FAM69CQ0P6D2 419 aa9.17□□□□□ -0.94
CAST-232ENST00000510500 PKN1Q16512 942 aa9.17□□□□□ -0.94
CAST-232ENST00000510500 CCDC30Q5VVM6 783 aa9.17□□□□□ -0.94
CAST-232ENST00000510500 DUSP27Q5VZP5 1158 aa9.17□□□□□ -0.94
CAST-232ENST00000510500 GOLGA1Q92805 767 aa9.17□□□□□ -0.94
CAST-232ENST00000510500 TTC14Q96N46 770 aa9.17□□□□□ -0.94
CAST-232ENST00000510500 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.17□□□□□ -0.94
CAST-232ENST00000510500 TRIM7Q9C029 511 aa9.17□□□□□ -0.94
CAST-232ENST00000510500 CPSF2Q9P2I0 782 aaKnown RBP9.17□□□□□ -0.94
CAST-232ENST00000510500 RABL2AQ9UBK7 228 aaPredicted RBP9.17□□□□□ -0.94
CAST-232ENST00000510500 SHROOM2Q13796 1616 aa9.16□□□□□ -0.94
CAST-232ENST00000510500 AMPD3Q01432 767 aa9.16□□□□□ -0.94
CAST-232ENST00000510500 SLC7A5Q01650 507 aa9.16□□□□□ -0.94
CAST-232ENST00000510500 ICA1Q05084 483 aa9.16□□□□□ -0.94
CAST-232ENST00000510500 RAPGEF1Q13905 1077 aa9.16□□□□□ -0.94
CAST-232ENST00000510500 FXNQ16595 210 aa9.16□□□□□ -0.94
CAST-232ENST00000510500 SYNE3Q6ZMZ3 975 aa9.16□□□□□ -0.94
CAST-232ENST00000510500 OSBPL2Q9H1P3 480 aa9.16□□□□□ -0.94
CAST-232ENST00000510500 TMCC3Q9ULS5 477 aa9.16□□□□□ -0.94
CAST-232ENST00000510500 BARX2Q9UMQ3 279 aaPredicted RBP9.16□□□□□ -0.94
CAST-232ENST00000510500 TSPOAP1O95153 1857 aa9.15□□□□□ -0.94
CAST-232ENST00000510500 DYTNA2CJ06 578 aa9.15□□□□□ -0.94
CAST-232ENST00000510500 SOCS7O14512 581 aa9.15□□□□□ -0.94
CAST-232ENST00000510500 PPFIA3O75145 1194 aa9.15□□□□□ -0.94
CAST-232ENST00000510500 FRAT2O75474 233 aaPredicted RBP9.15□□□□□ -0.94
CAST-232ENST00000510500 LMNB1P20700 586 aa9.15□□□□□ -0.94
CAST-232ENST00000510500 PRPF4BQ13523 1007 aaKnown RBP9.15□□□□□ -0.94
CAST-232ENST00000510500 CCDC93Q567U6 631 aa9.15□□□□□ -0.94
CAST-232ENST00000510500 MUM1L1Q5H9M0 696 aa9.15□□□□□ -0.94
CAST-232ENST00000510500 MYLK4Q86YV6 388 aaPredicted RBP9.15□□□□□ -0.94
CAST-232ENST00000510500 ANKRD20A12PQ8NF67 263 aa9.15□□□□□ -0.94
CAST-232ENST00000510500 MPP4Q96JB8 637 aa9.15□□□□□ -0.94
CAST-232ENST00000510500 FRMD6Q96NE9 622 aa9.15□□□□□ -0.94
CAST-232ENST00000510500 PLEKHG4BQ96PX9 1271 aa9.15□□□□□ -0.94
CAST-232ENST00000510500 GINM1Q9NU53 330 aa9.15□□□□□ -0.94
CAST-232ENST00000510500 COMMD8Q9NX08 183 aa9.15□□□□□ -0.94
CAST-232ENST00000510500 ZNF652Q9Y2D9 606 aa9.15□□□□□ -0.94
CAST-232ENST00000510500 SPAG9O60271 1321 aaKnown RBP9.15□□□□□ -0.94
CAST-232ENST00000510500 NPHP1O15259 732 aa9.15□□□□□ -0.95
CAST-232ENST00000510500 C21orf2O43822 256 aa9.15□□□□□ -0.95
CAST-232ENST00000510500 KRT38O76015 456 aa9.15□□□□□ -0.95
CAST-232ENST00000510500 BAG4O95429 457 aaKnown RBP9.15□□□□□ -0.95
CAST-232ENST00000510500 MSL3P1P0C860 447 aa9.15□□□□□ -0.95
CAST-232ENST00000510500 HARSP12081 509 aaKnown RBP9.15□□□□□ -0.95
CAST-232ENST00000510500 SIM2Q14190 667 aaPredicted RBP9.15□□□□□ -0.95
CAST-232ENST00000510500 TERF2Q15554 542 aa9.15□□□□□ -0.95
CAST-232ENST00000510500 ACBD5Q5T8D3 534 aaPredicted RBP9.15□□□□□ -0.95
CAST-232ENST00000510500 CHCHD4Q8N4Q1 142 aa9.15□□□□□ -0.95
CAST-232ENST00000510500 PRPF38AQ8NAV1 312 aaKnown RBP9.15□□□□□ -0.95
CAST-232ENST00000510500 MYRIPQ8NFW9 859 aa9.15□□□□□ -0.95
CAST-232ENST00000510500 FRS2Q8WU20 508 aa9.15□□□□□ -0.95
CAST-232ENST00000510500 IER2Q9BTL4 223 aa9.15□□□□□ -0.95
CAST-232ENST00000510500 IKBKGQ9Y6K9 419 aa9.15□□□□□ -0.95
CAST-232ENST00000510500 DHX29Q7Z478 1369 aaKnown RBP9.14□□□□□ -0.95
CAST-232ENST00000510500 VAMP4O75379 141 aa9.14□□□□□ -0.95
CAST-232ENST00000510500 RRM1P23921 792 aa9.14□□□□□ -0.95
CAST-232ENST00000510500 LMOD1P29536 600 aaPredicted RBP9.14□□□□□ -0.95
CAST-232ENST00000510500 MCM5P33992 734 aa9.14□□□□□ -0.95
CAST-232ENST00000510500 RPS6KA3P51812 740 aa9.14□□□□□ -0.95
CAST-232ENST00000510500 EIF2B5Q13144 721 aaKnown RBP9.14□□□□□ -0.95
CAST-232ENST00000510500 MMRN1Q13201 1228 aa9.14□□□□□ -0.95
CAST-232ENST00000510500 TSGA10IPQ3SY00 556 aa9.14□□□□□ -0.95
CAST-232ENST00000510500 KANK3Q6NY19 840 aa9.14□□□□□ -0.95
CAST-232ENST00000510500 NUTM1Q86Y26 1132 aa9.14□□□□□ -0.95
CAST-232ENST00000510500 PDCL2Q8N4E4 241 aa9.14□□□□□ -0.95
CAST-232ENST00000510500 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.14□□□□□ -0.95
CAST-232ENST00000510500 RBSNQ9H1K0 784 aa9.14□□□□□ -0.95
CAST-232ENST00000510500 ASAP1Q9ULH1 1129 aa9.14□□□□□ -0.95
CAST-232ENST00000510500 CCDC88BA6NC98 1476 aa9.14□□□□□ -0.95
CAST-232ENST00000510500 CCDC163A0A0D9SF12 145 aa9.13□□□□□ -0.95
CAST-232ENST00000510500 A0A1B0GUL7 405 aa9.13□□□□□ -0.95
CAST-232ENST00000510500 KIF3BO15066 747 aa9.13□□□□□ -0.95
CAST-232ENST00000510500 TBX3O15119 743 aa9.13□□□□□ -0.95
CAST-232ENST00000510500 RNASEH2AO75792 299 aaKnown RBP9.13□□□□□ -0.95
CAST-232ENST00000510500 MMEP08473 750 aa9.13□□□□□ -0.95
CAST-232ENST00000510500 RBP3P10745 1247 aa9.13□□□□□ -0.95
CAST-232ENST00000510500 ZNF24P17028 368 aa9.13□□□□□ -0.95
CAST-232ENST00000510500 MSNP26038 577 aaKnown RBP9.13□□□□□ -0.95
CAST-232ENST00000510500 PREPLQ4J6C6 727 aaPredicted RBP9.13□□□□□ -0.95
CAST-232ENST00000510500 SYCP2LQ5T4T6 812 aa9.13□□□□□ -0.95
CAST-232ENST00000510500 TTLL5Q6EMB2 1281 aa9.13□□□□□ -0.95
CAST-232ENST00000510500 CLASRPQ8N2M8 674 aaKnown RBP9.13□□□□□ -0.95
CAST-232ENST00000510500 MTMR14Q8NCE2 650 aa9.13□□□□□ -0.95
CAST-232ENST00000510500 ERP27Q96DN0 273 aa9.13□□□□□ -0.95
CAST-232ENST00000510500 GMLQ99445 158 aa9.13□□□□□ -0.95
CAST-232ENST00000510500 CRACR2AQ9BSW2 395 aa9.13□□□□□ -0.95
CAST-232ENST00000510500 AS3MTQ9HBK9 375 aa9.13□□□□□ -0.95
CAST-232ENST00000510500 CAPN10Q9HC96 672 aa9.13□□□□□ -0.95
CAST-232ENST00000510500 QPCTLQ9NXS2 382 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms