RNA–Protein interactions for RNA: ENST00000510245.1

CAST-231, Transcript of calpastatin, humanhuman

TSL 4

Gene CAST, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-231ENST00000510245 SSH2Q76I76 1423 aa11.42□□□□□ -0.58
CAST-231ENST00000510245 TOMM70O94826 608 aa11.41□□□□□ -0.58
CAST-231ENST00000510245 RAB15P59190 212 aa11.41□□□□□ -0.58
CAST-231ENST00000510245 PTF1AQ7RTS3 328 aa11.41□□□□□ -0.58
CAST-231ENST00000510245 ZIC2O95409 532 aaPredicted RBP11.4□□□□□ -0.58
CAST-231ENST00000510245 HTRA3P83110 453 aa11.4□□□□□ -0.58
CAST-231ENST00000510245 KANK4Q5T7N3 995 aaPredicted RBP11.4□□□□□ -0.58
CAST-231ENST00000510245 CCDC116Q8IYX3 515 aa11.4□□□□□ -0.58
CAST-231ENST00000510245 NBPF20Q3BBV1 942 aa11.39□□□□□ -0.59
CAST-231ENST00000510245 TNS2Q63HR2 1409 aa11.39□□□□□ -0.59
CAST-231ENST00000510245 ZNF787Q6DD87 383 aa11.39□□□□□ -0.59
CAST-231ENST00000510245 LARP1Q6PKG0 1096 aaKnown RBP11.39□□□□□ -0.59
CAST-231ENST00000510245 PMFBP1Q8TBY8 1022 aa11.39□□□□□ -0.59
CAST-231ENST00000510245 THRAP3Q9Y2W1 955 aaKnown RBP11.39□□□□□ -0.59
CAST-231ENST00000510245 GPRASP1Q5JY77 1395 aa11.39□□□□□ -0.59
CAST-231ENST00000510245 PLEKHH1Q9ULM0 1364 aa11.39□□□□□ -0.59
CAST-231ENST00000510245 WDR90Q96KV7 1748 aa11.38□□□□□ -0.59
CAST-231ENST00000510245 HSPA1AP0DMV8 641 aaKnown RBP11.38□□□□□ -0.59
CAST-231ENST00000510245 HSPA1BP0DMV9 641 aaKnown RBP11.38□□□□□ -0.59
CAST-231ENST00000510245 TIMP2P16035 220 aa11.38□□□□□ -0.59
CAST-231ENST00000510245 ITPKCQ96DU7 683 aa11.38□□□□□ -0.59
CAST-231ENST00000510245 ALG2Q9H553 416 aa11.38□□□□□ -0.59
CAST-231ENST00000510245 GOLGB1Q14789 3259 aaKnown RBP11.38□□□□□ -0.59
CAST-231ENST00000510245 NUP155O75694 1391 aa11.38□□□□□ -0.59
CAST-231ENST00000510245 INTS6LQ5JSJ4 861 aaKnown RBP11.37□□□□□ -0.59
CAST-231ENST00000510245 ZFAND3Q9H8U3 227 aa11.37□□□□□ -0.59
CAST-231ENST00000510245 ATP13A2Q9NQ11 1180 aa11.37□□□□□ -0.59
CAST-231ENST00000510245 ATP7BP35670 1465 aa11.37□□□□□ -0.59
CAST-231ENST00000510245 PEAK1Q9H792 1746 aa11.36□□□□□ -0.59
CAST-231ENST00000510245 SLC16A10Q8TF71 515 aa11.36□□□□□ -0.59
CAST-231ENST00000510245 KLF16Q9BXK1 252 aaPredicted RBP11.36□□□□□ -0.59
CAST-231ENST00000510245 EMILIN1Q9Y6C2 1016 aa11.36□□□□□ -0.59
CAST-231ENST00000510245 POTECB2RU33 542 aa11.35□□□□□ -0.59
CAST-231ENST00000510245 BMP1P13497 986 aa11.35□□□□□ -0.59
CAST-231ENST00000510245 ZC3H6P61129 1189 aaKnown RBP11.35□□□□□ -0.59
CAST-231ENST00000510245 DDB1Q16531 1140 aa11.35□□□□□ -0.59
CAST-231ENST00000510245 PPP1R26Q5T8A7 1209 aaPredicted RBP11.35□□□□□ -0.59
CAST-231ENST00000510245 GMPR2Q9P2T1 348 aaKnown RBP11.35□□□□□ -0.59
CAST-231ENST00000510245 PARP4Q9UKK3 1724 aaKnown RBP11.35□□□□□ -0.59
CAST-231ENST00000510245 CLTCL1P53675 1640 aa11.35□□□□□ -0.59
CAST-231ENST00000510245 TOPAZ1Q8N9V7 1692 aa11.34□□□□□ -0.59
CAST-231ENST00000510245 DHX9Q08211 1270 aaKnown RBP11.34□□□□□ -0.59
CAST-231ENST00000510245 UCN2Q96RP3 112 aa11.34□□□□□ -0.59
CAST-231ENST00000510245 PGPEP1Q9NXJ5 209 aa11.34□□□□□ -0.59
CAST-231ENST00000510245 ALS2Q96Q42 1657 aa11.33□□□□□ -0.6
CAST-231ENST00000510245 TRPM3Q9HCF6 1732 aaPredicted RBP11.33□□□□□ -0.6
CAST-231ENST00000510245 ACIN1Q9UKV3 1341 aaKnown RBP11.33□□□□□ -0.6
CAST-231ENST00000510245 TULP4Q9NRJ4 1543 aa11.32□□□□□ -0.6
CAST-231ENST00000510245 RFX1P22670 979 aa11.32□□□□□ -0.6
CAST-231ENST00000510245 MCCD1P59942 119 aaPredicted RBP11.32□□□□□ -0.6
CAST-231ENST00000510245 ZNF827Q17R98 1081 aa11.32□□□□□ -0.6
CAST-231ENST00000510245 C16orf71Q8IYS4 520 aaPredicted RBP11.32□□□□□ -0.6
CAST-231ENST00000510245 ZNF592Q92610 1267 aa11.32□□□□□ -0.6
CAST-231ENST00000510245 ABCC11Q96J66 1382 aa11.31□□□□□ -0.6
CAST-231ENST00000510245 EIF4G2P78344 907 aaKnown RBP eCLIP11.31□□□□□ -0.6
CAST-231ENST00000510245 CFAP70Q5T0N1 1121 aa11.31□□□□□ -0.6
CAST-231ENST00000510245 TRIM46Q7Z4K8 759 aa11.31□□□□□ -0.6
CAST-231ENST00000510245 TMPRSS4Q9NRS4 437 aa11.31□□□□□ -0.6
CAST-231ENST00000510245 ANKARQ7Z5J8 1434 aa11.31□□□□□ -0.6
CAST-231ENST00000510245 IFT172Q9UG01 1749 aa11.31□□□□□ -0.6
CAST-231ENST00000510245 CRYBG1Q9Y4K1 1723 aa11.31□□□□□ -0.6
CAST-231ENST00000510245 RPGRIP1LQ68CZ1 1315 aa11.31□□□□□ -0.6
CAST-231ENST00000510245 ESPNB1AK53 854 aa11.3□□□□□ -0.6
CAST-231ENST00000510245 ERVH48-1M5A8F1 160 aa11.3□□□□□ -0.6
CAST-231ENST00000510245 SEMA3FQ13275 785 aa11.3□□□□□ -0.6
CAST-231ENST00000510245 SBF2Q86WG5 1849 aa11.3□□□□□ -0.6
CAST-231ENST00000510245 RGPD8O14715 1765 aaPredicted RBP11.29□□□□□ -0.6
CAST-231ENST00000510245 BCL9O00512 1426 aa11.29□□□□□ -0.6
CAST-231ENST00000510245 LRRC37A3O60309 1634 aa11.29□□□□□ -0.6
CAST-231ENST00000510245 FSTL1Q12841 308 aa11.29□□□□□ -0.6
CAST-231ENST00000510245 SCARF1Q14162 830 aa11.29□□□□□ -0.6
CAST-231ENST00000510245 MRPL14Q6P1L8 145 aaKnown RBP11.29□□□□□ -0.6
CAST-231ENST00000510245 PPP1R12CQ9BZL4 782 aa11.29□□□□□ -0.6
CAST-231ENST00000510245 SENP2Q9HC62 589 aa11.29□□□□□ -0.6
CAST-231ENST00000510245 PAPPAQ13219 1627 aa11.28□□□□□ -0.6
CAST-231ENST00000510245 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.28□□□□□ -0.6
CAST-231ENST00000510245 PALM3A6NDB9 673 aaPredicted RBP11.28□□□□□ -0.6
CAST-231ENST00000510245 SOX11P35716 441 aa11.28□□□□□ -0.6
CAST-231ENST00000510245 MLLT1Q03111 559 aaPredicted RBP11.28□□□□□ -0.6
CAST-231ENST00000510245 CBLBQ13191 982 aa11.28□□□□□ -0.6
CAST-231ENST00000510245 FAM50AQ14320 339 aaKnown RBP11.28□□□□□ -0.6
CAST-231ENST00000510245 MARCH10Q8NA82 808 aaPredicted RBP11.28□□□□□ -0.6
CAST-231ENST00000510245 PURBQ96QR8 312 aaKnown RBP11.28□□□□□ -0.6
CAST-231ENST00000510245 CRB1P82279 1406 aa11.27□□□□□ -0.6
CAST-231ENST00000510245 PIK3CDO00329 1044 aa11.27□□□□□ -0.61
CAST-231ENST00000510245 UPP2O95045 317 aa11.27□□□□□ -0.61
CAST-231ENST00000510245 C6orf118Q5T5N4 469 aa11.27□□□□□ -0.61
CAST-231ENST00000510245 RNF20Q5VTR2 975 aa11.27□□□□□ -0.61
CAST-231ENST00000510245 TMEM132EQ6IEE7 984 aa11.27□□□□□ -0.61
CAST-231ENST00000510245 NGDNQ8NEJ9 315 aaKnown RBP11.27□□□□□ -0.61
CAST-231ENST00000510245 NMRK2Q9NPI5 230 aa11.27□□□□□ -0.61
CAST-231ENST00000510245 ANKRD30BQ9BXX2 1392 aa11.27□□□□□ -0.61
CAST-231ENST00000510245 ARHGEF28Q8N1W1 1705 aaKnown RBP11.26□□□□□ -0.61
CAST-231ENST00000510245 SAFB2Q14151 953 aaKnown RBP eCLIP11.26□□□□□ -0.61
CAST-231ENST00000510245 NUTM2GQ5VZR2 741 aa11.26□□□□□ -0.61
CAST-231ENST00000510245 TBC1D9Q6ZT07 1266 aa11.26□□□□□ -0.61
CAST-231ENST00000510245 ZFP42Q96MM3 310 aa11.26□□□□□ -0.61
CAST-231ENST00000510245 TFIP11Q9UBB9 837 aaKnown RBP11.26□□□□□ -0.61
CAST-231ENST00000510245 USP19O94966 1318 aa11.26□□□□□ -0.61
CAST-231ENST00000510245 PNPLA7Q6ZV29 1317 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms