RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 ANKRD45Q5TZF3 282 aa20.69■□□□□ 0.9
SCAMP1-203ENST00000510030 KIF1BPQ96EK5 621 aa20.69■□□□□ 0.9
SCAMP1-203ENST00000510030 SYT17Q9BSW7 474 aa20.69■□□□□ 0.9
SCAMP1-203ENST00000510030 PDZRN3Q9UPQ7 1066 aa20.69■□□□□ 0.9
SCAMP1-203ENST00000510030 CHMP3Q9Y3E7 222 aa20.69■□□□□ 0.9
SCAMP1-203ENST00000510030 DDX60Q8IY21 1712 aaKnown RBP20.69■□□□□ 0.9
SCAMP1-203ENST00000510030 RTL9Q8NET4 1388 aa20.69■□□□□ 0.9
SCAMP1-203ENST00000510030 G3BP1Q13283 466 aaKnown RBP eCLIP20.68■□□□□ 0.9
SCAMP1-203ENST00000510030 IFIT5Q13325 482 aaKnown RBP20.68■□□□□ 0.9
SCAMP1-203ENST00000510030 CCDC152Q4G0S7 254 aa20.68■□□□□ 0.9
SCAMP1-203ENST00000510030 AMIGO3Q86WK7 504 aa20.68■□□□□ 0.9
SCAMP1-203ENST00000510030 PNPLA7Q6ZV29 1317 aa20.68■□□□□ 0.9
SCAMP1-203ENST00000510030 MSH5O43196 834 aa20.67■□□□□ 0.9
SCAMP1-203ENST00000510030 EPHA10Q5JZY3 1008 aa20.67■□□□□ 0.9
SCAMP1-203ENST00000510030 SLC10A5Q5PT55 438 aa20.67■□□□□ 0.9
SCAMP1-203ENST00000510030 BICDL1Q6ZP65 573 aa20.67■□□□□ 0.9
SCAMP1-203ENST00000510030 NFIXQ14938 502 aa20.66■□□□□ 0.9
SCAMP1-203ENST00000510030 KLHL34Q8N239 644 aa20.66■□□□□ 0.9
SCAMP1-203ENST00000510030 CNBD1Q8NA66 436 aa20.66■□□□□ 0.9
SCAMP1-203ENST00000510030 JARID2Q92833 1246 aaPredicted RBP20.66■□□□□ 0.9
SCAMP1-203ENST00000510030 EXOC6BQ9Y2D4 811 aa20.66■□□□□ 0.9
SCAMP1-203ENST00000510030 ANKRD18BA2A2Z9 1011 aa20.65■□□□□ 0.9
SCAMP1-203ENST00000510030 ST5P78524 1137 aa20.65■□□□□ 0.9
SCAMP1-203ENST00000510030 TAF7LQ5H9L4 462 aa20.65■□□□□ 0.9
SCAMP1-203ENST00000510030 COL23A1Q86Y22 540 aaPredicted RBP20.65■□□□□ 0.9
SCAMP1-203ENST00000510030 TTLL11Q8NHH1 800 aa20.65■□□□□ 0.9
SCAMP1-203ENST00000510030 CIAO1O76071 339 aa20.64■□□□□ 0.89
SCAMP1-203ENST00000510030 SLC16A10Q8TF71 515 aa20.64■□□□□ 0.89
SCAMP1-203ENST00000510030 NLRP3Q96P20 1036 aa20.64■□□□□ 0.89
SCAMP1-203ENST00000510030 FAM177BA6PVY3 158 aa20.63■□□□□ 0.89
SCAMP1-203ENST00000510030 TM4SF1P30408 202 aa20.63■□□□□ 0.89
SCAMP1-203ENST00000510030 IL15P40933 162 aaPredicted RBP20.63■□□□□ 0.89
SCAMP1-203ENST00000510030 RFX5P48382 616 aaPredicted RBP20.63■□□□□ 0.89
SCAMP1-203ENST00000510030 LNPKQ9C0E8 428 aa20.63■□□□□ 0.89
SCAMP1-203ENST00000510030 PTPN12Q05209 780 aaKnown RBP20.62■□□□□ 0.89
SCAMP1-203ENST00000510030 SF3B3Q15393 1217 aaKnown RBP20.62■□□□□ 0.89
SCAMP1-203ENST00000510030 ERFEQ4G0M1 354 aa20.62■□□□□ 0.89
SCAMP1-203ENST00000510030 SMIM5Q71RC9 77 aa20.62■□□□□ 0.89
SCAMP1-203ENST00000510030 CLASRPQ8N2M8 674 aaKnown RBP20.62■□□□□ 0.89
SCAMP1-203ENST00000510030 RHPN1Q8TCX5 695 aa20.62■□□□□ 0.89
SCAMP1-203ENST00000510030 CDC5LQ99459 802 aaKnown RBP20.62■□□□□ 0.89
SCAMP1-203ENST00000510030 ITGA6P23229 1130 aa20.61■□□□□ 0.89
SCAMP1-203ENST00000510030 FAM161AQ3B820 660 aa20.61■□□□□ 0.89
SCAMP1-203ENST00000510030 NUTM1Q86Y26 1132 aa20.61■□□□□ 0.89
SCAMP1-203ENST00000510030 NRXN2Q9P2S2 1712 aa20.61■□□□□ 0.89
SCAMP1-203ENST00000510030 SERPINB2P05120 415 aa20.6■□□□□ 0.89
SCAMP1-203ENST00000510030 HCLS1P14317 486 aaPredicted RBP20.6■□□□□ 0.89
SCAMP1-203ENST00000510030 RGS3P49796 1198 aa20.6■□□□□ 0.89
SCAMP1-203ENST00000510030 GPATCH3Q96I76 525 aa20.6■□□□□ 0.89
SCAMP1-203ENST00000510030 PARP3Q9Y6F1 533 aa20.6■□□□□ 0.89
SCAMP1-203ENST00000510030 DCAF8L1A6NGE4 600 aa20.59■□□□□ 0.89
SCAMP1-203ENST00000510030 EYA2O00167 538 aa20.59■□□□□ 0.89
SCAMP1-203ENST00000510030 APBB1O00213 710 aa20.59■□□□□ 0.89
SCAMP1-203ENST00000510030 MSL1Q68DK7 614 aa20.59■□□□□ 0.89
SCAMP1-203ENST00000510030 GREM2Q9H772 168 aa20.59■□□□□ 0.89
SCAMP1-203ENST00000510030 POLRMTO00411 1230 aaKnown RBP20.58■□□□□ 0.89
SCAMP1-203ENST00000510030 IGHMBP2P38935 993 aaKnown RBP20.58■□□□□ 0.89
SCAMP1-203ENST00000510030 SYNE4Q8N205 404 aa20.58■□□□□ 0.89
SCAMP1-203ENST00000510030 NLGN2Q8NFZ4 835 aa20.58■□□□□ 0.89
SCAMP1-203ENST00000510030 GPR108Q9NPR9 543 aa20.58■□□□□ 0.89
SCAMP1-203ENST00000510030 PA2G4Q9UQ80 394 aaKnown RBP20.58■□□□□ 0.89
SCAMP1-203ENST00000510030 ABCC12Q96J65 1359 aa20.58■□□□□ 0.88
SCAMP1-203ENST00000510030 AOX1Q06278 1338 aa20.57■□□□□ 0.88
SCAMP1-203ENST00000510030 PRR5LQ6MZQ0 368 aa20.57■□□□□ 0.88
SCAMP1-203ENST00000510030 MPHOSPH8Q99549 860 aa20.57■□□□□ 0.88
SCAMP1-203ENST00000510030 SIL1Q9H173 461 aa20.57■□□□□ 0.88
SCAMP1-203ENST00000510030 LDHAL6AQ6ZMR3 332 aa20.56■□□□□ 0.88
SCAMP1-203ENST00000510030 AKAP2Q9Y2D5 859 aa20.56■□□□□ 0.88
SCAMP1-203ENST00000510030 MROH5Q6ZUA9 1318 aa20.55■□□□□ 0.88
SCAMP1-203ENST00000510030 IFIT2P09913 472 aaKnown RBP20.55■□□□□ 0.88
SCAMP1-203ENST00000510030 DDX46Q7L014 1031 aaKnown RBP20.55■□□□□ 0.88
SCAMP1-203ENST00000510030 OSBPL3Q9H4L5 887 aa20.55■□□□□ 0.88
SCAMP1-203ENST00000510030 CNNM1Q9NRU3 951 aa20.55■□□□□ 0.88
SCAMP1-203ENST00000510030 CEP126Q9P2H0 1117 aa20.55■□□□□ 0.88
SCAMP1-203ENST00000510030 GOLGB1Q14789 3259 aaKnown RBP20.54■□□□□ 0.88
SCAMP1-203ENST00000510030 MMP10P09238 476 aa20.54■□□□□ 0.88
SCAMP1-203ENST00000510030 MX1P20591 662 aa20.54■□□□□ 0.88
SCAMP1-203ENST00000510030 DDR1Q08345 913 aa20.54■□□□□ 0.88
SCAMP1-203ENST00000510030 ANKRD18AQ8IVF6 992 aa20.54■□□□□ 0.88
SCAMP1-203ENST00000510030 TTC41PQ6P2S7 1318 aa20.53■□□□□ 0.88
SCAMP1-203ENST00000510030 ERC2O15083 957 aa20.53■□□□□ 0.88
SCAMP1-203ENST00000510030 EIF5BO60841 1220 aaKnown RBP20.53■□□□□ 0.88
SCAMP1-203ENST00000510030 SASH1O94885 1247 aa20.53■□□□□ 0.88
SCAMP1-203ENST00000510030 PDE4AP27815 886 aa20.53■□□□□ 0.88
SCAMP1-203ENST00000510030 PDE6BP35913 854 aa20.53■□□□□ 0.88
SCAMP1-203ENST00000510030 ZNF784Q8NCA9 323 aaPredicted RBP20.53■□□□□ 0.88
SCAMP1-203ENST00000510030 KLHDC4Q8TBB5 520 aa20.53■□□□□ 0.88
SCAMP1-203ENST00000510030 RPGRQ92834 1020 aaKnown RBP20.53■□□□□ 0.88
SCAMP1-203ENST00000510030 BRIP1Q9BX63 1249 aa20.53■□□□□ 0.88
SCAMP1-203ENST00000510030 TNRC6CQ9HCJ0 1690 aaKnown RBP20.52■□□□□ 0.88
SCAMP1-203ENST00000510030 SMARCA5O60264 1052 aaPredicted RBP20.52■□□□□ 0.88
SCAMP1-203ENST00000510030 BMP2KLQ5H9B9 411 aa20.52■□□□□ 0.88
SCAMP1-203ENST00000510030 ATG9AQ7Z3C6 839 aa20.52■□□□□ 0.88
SCAMP1-203ENST00000510030 CCDC85AQ96PX6 553 aaPredicted RBP20.52■□□□□ 0.88
SCAMP1-203ENST00000510030 IL1RAPL2Q9NP60 686 aa20.52■□□□□ 0.88
SCAMP1-203ENST00000510030 STAP2Q9UGK3 403 aa20.52■□□□□ 0.88
SCAMP1-203ENST00000510030 CRY2Q49AN0 593 aa20.51■□□□□ 0.87
SCAMP1-203ENST00000510030 TMC4Q7Z404 712 aa20.51■□□□□ 0.87
SCAMP1-203ENST00000510030 AACSQ86V21 672 aa20.51■□□□□ 0.87
SCAMP1-203ENST00000510030 PLEKHM2Q8IWE5 1019 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms