RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 USP16Q9Y5T5 823 aa14.7□□□□□ -0.06
SNF8-207ENST00000509995 HMOX1P09601 288 aa14.69□□□□□ -0.06
SNF8-207ENST00000509995 HLFQ16534 295 aa14.69□□□□□ -0.06
SNF8-207ENST00000509995 TMX4Q9H1E5 349 aaPredicted RBP14.69□□□□□ -0.06
SNF8-207ENST00000509995 ATP6V0A2Q9Y487 856 aa14.69□□□□□ -0.06
SNF8-207ENST00000509995 YDJCA8MPS7 323 aa14.68□□□□□ -0.06
SNF8-207ENST00000509995 EN2P19622 333 aaPredicted RBP14.68□□□□□ -0.06
SNF8-207ENST00000509995 MNX1P50219 401 aaPredicted RBP14.68□□□□□ -0.06
SNF8-207ENST00000509995 DPF2Q92785 391 aa14.68□□□□□ -0.06
SNF8-207ENST00000509995 ZBTB12Q9Y330 459 aaPredicted RBP14.68□□□□□ -0.06
SNF8-207ENST00000509995 IBTKQ9P2D0 1353 aaPredicted RBP14.68□□□□□ -0.06
SNF8-207ENST00000509995 PRAMEF22A3QJZ6 481 aa14.67□□□□□ -0.06
SNF8-207ENST00000509995 SULF1Q8IWU6 871 aa14.67□□□□□ -0.06
SNF8-207ENST00000509995 CDCA5Q96FF9 252 aa14.67□□□□□ -0.06
SNF8-207ENST00000509995 CFHR5Q9BXR6 569 aa14.67□□□□□ -0.06
SNF8-207ENST00000509995 VCANP13611 3396 aa14.67□□□□□ -0.06
SNF8-207ENST00000509995 DUOX1Q9NRD9 1551 aa14.66□□□□□ -0.06
SNF8-207ENST00000509995 H0YGN5 161 aa14.66□□□□□ -0.06
SNF8-207ENST00000509995 KCNQ3O43525 872 aa14.66□□□□□ -0.06
SNF8-207ENST00000509995 TM4SF4P48230 202 aa14.66□□□□□ -0.06
SNF8-207ENST00000509995 FKBP1BP68106 108 aa14.66□□□□□ -0.06
SNF8-207ENST00000509995 DPP8Q6V1X1 898 aaPredicted RBP14.66□□□□□ -0.06
SNF8-207ENST00000509995 IL17REQ8NFR9 667 aa14.66□□□□□ -0.06
SNF8-207ENST00000509995 GGA3Q9NZ52 723 aa14.66□□□□□ -0.06
SNF8-207ENST00000509995 TRIM17Q9Y577 477 aa14.66□□□□□ -0.06
SNF8-207ENST00000509995 NBPF26B4DH59 902 aa14.65□□□□□ -0.06
SNF8-207ENST00000509995 NBPF10Q6P3W6 841 aaKnown RBP14.65□□□□□ -0.06
SNF8-207ENST00000509995 CHRDL2Q6WN34 429 aa14.65□□□□□ -0.06
SNF8-207ENST00000509995 PITPNM2Q9BZ72 1349 aa14.65□□□□□ -0.06
SNF8-207ENST00000509995 DDX60Q8IY21 1712 aaKnown RBP14.64□□□□□ -0.07
SNF8-207ENST00000509995 PSMD14O00487 310 aa14.64□□□□□ -0.07
SNF8-207ENST00000509995 C3orf67Q6ZVT6 689 aa14.64□□□□□ -0.07
SNF8-207ENST00000509995 OTOP1Q7RTM1 612 aa14.64□□□□□ -0.07
SNF8-207ENST00000509995 R3HDMLQ9H3Y0 253 aa14.64□□□□□ -0.07
SNF8-207ENST00000509995 CEMIPQ8WUJ3 1361 aa14.63□□□□□ -0.07
SNF8-207ENST00000509995 LAMB4A4D0S4 1761 aa14.63□□□□□ -0.07
SNF8-207ENST00000509995 GNAT3A8MTJ3 354 aa14.63□□□□□ -0.07
SNF8-207ENST00000509995 KIF4BQ2VIQ3 1234 aa14.63□□□□□ -0.07
SNF8-207ENST00000509995 RBM26Q5T8P6 1007 aaKnown RBP14.63□□□□□ -0.07
SNF8-207ENST00000509995 MORC1Q86VD1 984 aa14.63□□□□□ -0.07
SNF8-207ENST00000509995 ARMC5Q96C12 935 aa14.63□□□□□ -0.07
SNF8-207ENST00000509995 RBM27Q9P2N5 1060 aaKnown RBP14.63□□□□□ -0.07
SNF8-207ENST00000509995 ABCC4O15439 1325 aa14.63□□□□□ -0.07
SNF8-207ENST00000509995 UBN2Q6ZU65 1347 aa14.63□□□□□ -0.07
SNF8-207ENST00000509995 LAMB2P55268 1798 aa14.62□□□□□ -0.07
SNF8-207ENST00000509995 LRRC37AA6NMS7 1700 aa14.62□□□□□ -0.07
SNF8-207ENST00000509995 BTBD11A6QL63 1104 aa14.62□□□□□ -0.07
SNF8-207ENST00000509995 RPS12P25398 132 aaKnown RBP14.62□□□□□ -0.07
SNF8-207ENST00000509995 SREBF2Q12772 1141 aa14.62□□□□□ -0.07
SNF8-207ENST00000509995 MPNDQ8N594 471 aa14.62□□□□□ -0.07
SNF8-207ENST00000509995 ASTN2O75129 1339 aaPredicted RBP14.62□□□□□ -0.07
SNF8-207ENST00000509995 ANKRD36CQ5JPF3 1778 aa14.61□□□□□ -0.07
SNF8-207ENST00000509995 SNRPA1P09661 255 aaKnown RBP14.61□□□□□ -0.07
SNF8-207ENST00000509995 MOB2Q70IA6 237 aa14.6□□□□□ -0.07
SNF8-207ENST00000509995 SP8Q8IXZ3 490 aa14.6□□□□□ -0.07
SNF8-207ENST00000509995 PTPN22Q9Y2R2 807 aa14.6□□□□□ -0.07
SNF8-207ENST00000509995 ZNF609O15014 1411 aa14.59□□□□□ -0.07
SNF8-207ENST00000509995 ERVV-1B6SEH8 477 aa14.59□□□□□ -0.07
SNF8-207ENST00000509995 NTSR2O95665 410 aa14.59□□□□□ -0.07
SNF8-207ENST00000509995 GPTP24298 496 aa14.59□□□□□ -0.07
SNF8-207ENST00000509995 MKRN3Q13064 507 aaKnown RBP14.59□□□□□ -0.07
SNF8-207ENST00000509995 SUSD4Q5VX71 490 aa14.59□□□□□ -0.07
SNF8-207ENST00000509995 SCN9AQ15858 1988 aa14.59□□□□□ -0.07
SNF8-207ENST00000509995 KDM3BQ7LBC6 1761 aa14.59□□□□□ -0.07
SNF8-207ENST00000509995 BBOX1O75936 387 aa14.58□□□□□ -0.08
SNF8-207ENST00000509995 ANGEL2Q5VTE6 544 aaKnown RBP14.58□□□□□ -0.08
SNF8-207ENST00000509995 GAS2L2Q8NHY3 880 aa14.58□□□□□ -0.08
SNF8-207ENST00000509995 NLRP3Q96P20 1036 aa14.58□□□□□ -0.08
SNF8-207ENST00000509995 POLR3GLQ9BT43 218 aa14.58□□□□□ -0.08
SNF8-207ENST00000509995 TMEM106CQ9BVX2 250 aa14.58□□□□□ -0.08
SNF8-207ENST00000509995 TAF1P21675 1872 aa14.58□□□□□ -0.08
SNF8-207ENST00000509995 MAP3K15Q6ZN16 1313 aa14.58□□□□□ -0.08
SNF8-207ENST00000509995 RTL9Q8NET4 1388 aa14.58□□□□□ -0.08
SNF8-207ENST00000509995 LAMB1P07942 1786 aa14.57□□□□□ -0.08
SNF8-207ENST00000509995 UBE2Q2LH0YL09 131 aa14.57□□□□□ -0.08
SNF8-207ENST00000509995 DBNDD1Q9H9R9 158 aa14.57□□□□□ -0.08
SNF8-207ENST00000509995 SPTBN5Q9NRC6 3674 aaKnown RBP14.57□□□□□ -0.08
SNF8-207ENST00000509995 ALDH1A1P00352 501 aa14.56□□□□□ -0.08
SNF8-207ENST00000509995 ZNF333Q96JL9 665 aa14.56□□□□□ -0.08
SNF8-207ENST00000509995 ERO1AQ96HE7 468 aa14.55□□□□□ -0.08
SNF8-207ENST00000509995 PRO3102Q9H379 93 aa14.55□□□□□ -0.08
SNF8-207ENST00000509995 PANK3Q9H999 370 aa14.55□□□□□ -0.08
SNF8-207ENST00000509995 SCARF1Q14162 830 aa14.54□□□□□ -0.08
SNF8-207ENST00000509995 WASHC4Q2M389 1173 aa14.54□□□□□ -0.08
SNF8-207ENST00000509995 KIF6Q6ZMV9 814 aa14.54□□□□□ -0.08
SNF8-207ENST00000509995 ZNF34Q8IZ26 560 aa14.54□□□□□ -0.08
SNF8-207ENST00000509995 KCNQ5Q9NR82 932 aa14.54□□□□□ -0.08
SNF8-207ENST00000509995 PSME4Q14997 1843 aa14.54□□□□□ -0.08
SNF8-207ENST00000509995 ECE2O60344 883 aa14.53□□□□□ -0.08
SNF8-207ENST00000509995 TTLL12Q14166 644 aaPredicted RBP14.53□□□□□ -0.08
SNF8-207ENST00000509995 PPP1R42Q7Z4L9 355 aa14.53□□□□□ -0.08
SNF8-207ENST00000509995 NGEFQ8N5V2 710 aa14.53□□□□□ -0.08
SNF8-207ENST00000509995 CD99L2Q8TCZ2 262 aa14.53□□□□□ -0.08
SNF8-207ENST00000509995 COL25A1Q9BXS0 654 aaPredicted RBP14.53□□□□□ -0.08
SNF8-207ENST00000509995 DIAPH1O60610 1272 aaKnown RBP14.52□□□□□ -0.09
SNF8-207ENST00000509995 SLC10A5Q5PT55 438 aa14.52□□□□□ -0.09
SNF8-207ENST00000509995 TTLL7Q6ZT98 887 aa14.52□□□□□ -0.09
SNF8-207ENST00000509995 ZBTB3Q9H5J0 574 aa14.52□□□□□ -0.09
SNF8-207ENST00000509995 EFCC1Q9HA90 598 aa14.52□□□□□ -0.09
SNF8-207ENST00000509995 SOX1O00570 391 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms