RNA–Protein interactions for RNA: ENST00000509789.2

CYSTM1-204, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 4

Gene CYSTM1, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-204ENST00000509789 LMBR1LQ6UX01 489 aa17.29■□□□□ 0.36
CYSTM1-204ENST00000509789 ANKRD44Q8N8A2 993 aa17.29■□□□□ 0.36
CYSTM1-204ENST00000509789 HMMRO75330 724 aa17.28■□□□□ 0.36
CYSTM1-204ENST00000509789 CTSWP56202 376 aa17.28■□□□□ 0.36
CYSTM1-204ENST00000509789 RABL6Q3YEC7 729 aaPredicted RBP17.28■□□□□ 0.36
CYSTM1-204ENST00000509789 CCDC24Q8N4L8 307 aa17.28■□□□□ 0.36
CYSTM1-204ENST00000509789 NLRP3Q96P20 1036 aa17.28■□□□□ 0.36
CYSTM1-204ENST00000509789 CHMP3Q9Y3E7 222 aa17.28■□□□□ 0.36
CYSTM1-204ENST00000509789 COL24A1Q17RW2 1714 aa17.27■□□□□ 0.36
CYSTM1-204ENST00000509789 CSF1RP07333 972 aa17.27■□□□□ 0.36
CYSTM1-204ENST00000509789 MTX1Q13505 466 aa17.27■□□□□ 0.36
CYSTM1-204ENST00000509789 RWDD1Q9H446 243 aaPredicted RBP17.27■□□□□ 0.36
CYSTM1-204ENST00000509789 SRGAP3O43295 1099 aa17.26■□□□□ 0.35
CYSTM1-204ENST00000509789 CCDC152Q4G0S7 254 aa17.26■□□□□ 0.35
CYSTM1-204ENST00000509789 TTLL11Q8NHH1 800 aa17.26■□□□□ 0.35
CYSTM1-204ENST00000509789 CCDC136Q96JN2 1154 aa17.26■□□□□ 0.35
CYSTM1-204ENST00000509789 BRIP1Q9BX63 1249 aa17.26■□□□□ 0.35
CYSTM1-204ENST00000509789 ABCC12Q96J65 1359 aa17.26■□□□□ 0.35
CYSTM1-204ENST00000509789 CASZ1Q86V15 1759 aa17.25■□□□□ 0.35
CYSTM1-204ENST00000509789 ZBTB22O15209 634 aa17.25■□□□□ 0.35
CYSTM1-204ENST00000509789 SF3B3Q15393 1217 aaKnown RBP17.25■□□□□ 0.35
CYSTM1-204ENST00000509789 SIRT2Q8IXJ6 389 aa17.25■□□□□ 0.35
CYSTM1-204ENST00000509789 PNMA6EA0A0J9YXQ4 647 aa17.24■□□□□ 0.35
CYSTM1-204ENST00000509789 PDE6BP35913 854 aa17.24■□□□□ 0.35
CYSTM1-204ENST00000509789 HDAC1Q13547 482 aaPredicted RBP17.24■□□□□ 0.35
CYSTM1-204ENST00000509789 CCDC57Q2TAC2 916 aa17.24■□□□□ 0.35
CYSTM1-204ENST00000509789 SSH3Q8TE77 659 aa17.24■□□□□ 0.35
CYSTM1-204ENST00000509789 CCDC85AQ96PX6 553 aaPredicted RBP17.24■□□□□ 0.35
CYSTM1-204ENST00000509789 RIC1Q4ADV7 1423 aa17.23■□□□□ 0.35
CYSTM1-204ENST00000509789 IFIT5Q13325 482 aaKnown RBP17.23■□□□□ 0.35
CYSTM1-204ENST00000509789 SPON1Q9HCB6 807 aa17.23■□□□□ 0.35
CYSTM1-204ENST00000509789 ANKRD18BA2A2Z9 1011 aa17.22■□□□□ 0.35
CYSTM1-204ENST00000509789 FAM161AQ3B820 660 aa17.22■□□□□ 0.35
CYSTM1-204ENST00000509789 C3orf67Q6ZVT6 689 aa17.22■□□□□ 0.35
CYSTM1-204ENST00000509789 GREM2Q9H772 168 aa17.22■□□□□ 0.35
CYSTM1-204ENST00000509789 KLRG2A4D1S0 409 aaPredicted RBP17.21■□□□□ 0.35
CYSTM1-204ENST00000509789 IGHDP01880 384 aa17.21■□□□□ 0.35
CYSTM1-204ENST00000509789 ITGA6P23229 1130 aa17.21■□□□□ 0.35
CYSTM1-204ENST00000509789 TAF7LQ5H9L4 462 aa17.21■□□□□ 0.35
CYSTM1-204ENST00000509789 B4GALNT3Q6L9W6 998 aa17.21■□□□□ 0.35
CYSTM1-204ENST00000509789 CHRDL2Q6WN34 429 aa17.21■□□□□ 0.35
CYSTM1-204ENST00000509789 DDX46Q7L014 1031 aaKnown RBP17.21■□□□□ 0.35
CYSTM1-204ENST00000509789 RPGRQ92834 1020 aaKnown RBP17.21■□□□□ 0.35
CYSTM1-204ENST00000509789 PDZRN3Q9UPQ7 1066 aa17.21■□□□□ 0.35
CYSTM1-204ENST00000509789 RTL9Q8NET4 1388 aa17.2■□□□□ 0.34
CYSTM1-204ENST00000509789 CRY2Q49AN0 593 aa17.2■□□□□ 0.34
CYSTM1-204ENST00000509789 SGIP1Q9BQI5 828 aa17.2■□□□□ 0.34
CYSTM1-204ENST00000509789 NRXN2Q9P2S2 1712 aa17.2■□□□□ 0.34
CYSTM1-204ENST00000509789 H0YIN7 160 aa17.19■□□□□ 0.34
CYSTM1-204ENST00000509789 SURF6O75683 361 aaKnown RBP17.19■□□□□ 0.34
CYSTM1-204ENST00000509789 PTGER2P43116 358 aa17.19■□□□□ 0.34
CYSTM1-204ENST00000509789 RFX5P48382 616 aaPredicted RBP17.19■□□□□ 0.34
CYSTM1-204ENST00000509789 RBM17Q96I25 401 aaKnown RBP17.19■□□□□ 0.34
CYSTM1-204ENST00000509789 CDC5LQ99459 802 aaKnown RBP17.19■□□□□ 0.34
CYSTM1-204ENST00000509789 DCTPP1Q9H773 170 aa17.19■□□□□ 0.34
CYSTM1-204ENST00000509789 COPRSQ9NQ92 184 aa17.19■□□□□ 0.34
CYSTM1-204ENST00000509789 DDX60Q8IY21 1712 aaKnown RBP17.18■□□□□ 0.34
CYSTM1-204ENST00000509789 MYH3P11055 1940 aa17.18■□□□□ 0.34
CYSTM1-204ENST00000509789 HOXA10P31260 410 aaPredicted RBP17.18■□□□□ 0.34
CYSTM1-204ENST00000509789 G3BP1Q13283 466 aaKnown RBP eCLIP17.18■□□□□ 0.34
CYSTM1-204ENST00000509789 HSP90AB4PQ58FF6 505 aa17.18■□□□□ 0.34
CYSTM1-204ENST00000509789 C2CD5Q86YS7 1000 aa17.18■□□□□ 0.34
CYSTM1-204ENST00000509789 SEC31BQ9NQW1 1179 aa17.18■□□□□ 0.34
CYSTM1-204ENST00000509789 LAMB2P55268 1798 aa17.17■□□□□ 0.34
CYSTM1-204ENST00000509789 NPR1P16066 1061 aa17.17■□□□□ 0.34
CYSTM1-204ENST00000509789 IGHMBP2P38935 993 aaKnown RBP17.17■□□□□ 0.34
CYSTM1-204ENST00000509789 PTPN12Q05209 780 aaKnown RBP17.17■□□□□ 0.34
CYSTM1-204ENST00000509789 OS9Q13438 667 aaPredicted RBP17.17■□□□□ 0.34
CYSTM1-204ENST00000509789 CENPQQ7L2Z9 268 aaPredicted RBP17.17■□□□□ 0.34
CYSTM1-204ENST00000509789 ANKRD18AQ8IVF6 992 aa17.17■□□□□ 0.34
CYSTM1-204ENST00000509789 GCC1Q96CN9 775 aa17.17■□□□□ 0.34
CYSTM1-204ENST00000509789 ZNF594Q96JF6 807 aaPredicted RBP17.17■□□□□ 0.34
CYSTM1-204ENST00000509789 CRAMP1Q96RY5 1269 aa17.17■□□□□ 0.34
CYSTM1-204ENST00000509789 PA2G4Q9UQ80 394 aaKnown RBP17.17■□□□□ 0.34
CYSTM1-204ENST00000509789 NOP58Q9Y2X3 529 aaKnown RBP17.17■□□□□ 0.34
CYSTM1-204ENST00000509789 C10orf71Q711Q0 1435 aa17.16■□□□□ 0.34
CYSTM1-204ENST00000509789 RAB11FIP3O75154 756 aa17.16■□□□□ 0.34
CYSTM1-204ENST00000509789 SRGNP10124 158 aa17.16■□□□□ 0.34
CYSTM1-204ENST00000509789 RPS8P62241 208 aaKnown RBP17.16■□□□□ 0.34
CYSTM1-204ENST00000509789 LDHAL6AQ6ZMR3 332 aa17.16■□□□□ 0.34
CYSTM1-204ENST00000509789 KLHDC4Q8TBB5 520 aa17.16■□□□□ 0.34
CYSTM1-204ENST00000509789 MASTLQ96GX5 879 aa17.16■□□□□ 0.34
CYSTM1-204ENST00000509789 MPHOSPH8Q99549 860 aa17.16■□□□□ 0.34
CYSTM1-204ENST00000509789 SIL1Q9H173 461 aa17.16■□□□□ 0.34
CYSTM1-204ENST00000509789 PPP1R1BQ9UD71 204 aaPredicted RBP17.16■□□□□ 0.34
CYSTM1-204ENST00000509789 FBXO3Q9UK99 471 aa17.16■□□□□ 0.34
CYSTM1-204ENST00000509789 EYA2O00167 538 aa17.15■□□□□ 0.34
CYSTM1-204ENST00000509789 ALDH1B1P30837 517 aa17.15■□□□□ 0.34
CYSTM1-204ENST00000509789 GRAPQ13588 217 aa17.15■□□□□ 0.34
CYSTM1-204ENST00000509789 STYK1Q6J9G0 422 aa17.15■□□□□ 0.34
CYSTM1-204ENST00000509789 ERC1Q8IUD2 1116 aa17.15■□□□□ 0.34
CYSTM1-204ENST00000509789 GRAPLQ8TC17 118 aaPredicted RBP17.15■□□□□ 0.34
CYSTM1-204ENST00000509789 ZNF622Q969S3 477 aaKnown RBP eCLIP17.15■□□□□ 0.34
CYSTM1-204ENST00000509789 EXOC6BQ9Y2D4 811 aa17.15■□□□□ 0.34
CYSTM1-204ENST00000509789 CD2APQ9Y5K6 639 aa17.15■□□□□ 0.34
CYSTM1-204ENST00000509789 BBOX1O75936 387 aa17.14■□□□□ 0.33
CYSTM1-204ENST00000509789 CIAO1O76071 339 aa17.14■□□□□ 0.33
CYSTM1-204ENST00000509789 TGFB2P61812 414 aa17.14■□□□□ 0.33
CYSTM1-204ENST00000509789 SMC5Q8IY18 1101 aa17.14■□□□□ 0.33
CYSTM1-204ENST00000509789 KLHL34Q8N239 644 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms