RNA–Protein interactions for RNA: ENST00000509477.1

CLGN-203, Transcript of calmegin, humanhuman

TSL 3

Gene CLGN, Length 706 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-203ENST00000509477 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.87□□□□□ -0.99
CLGN-203ENST00000509477 HELBQ8NG08 1087 aaPredicted RBP8.87□□□□□ -0.99
CLGN-203ENST00000509477 CLUAP1Q96AJ1 413 aa8.87□□□□□ -0.99
CLGN-203ENST00000509477 MTRQ99707 1265 aa8.87□□□□□ -0.99
CLGN-203ENST00000509477 USB1Q9BQ65 265 aaKnown RBP8.87□□□□□ -0.99
CLGN-203ENST00000509477 PKD1L3Q7Z443 1732 aa8.87□□□□□ -0.99
CLGN-203ENST00000509477 C10orf71Q711Q0 1435 aa8.87□□□□□ -0.99
CLGN-203ENST00000509477 KTN1Q86UP2 1357 aaKnown RBP8.86□□□□□ -0.99
CLGN-203ENST00000509477 LTN1O94822 1766 aa8.86□□□□□ -0.99
CLGN-203ENST00000509477 C4BP0C0L5 1744 aa8.86□□□□□ -0.99
CLGN-203ENST00000509477 CCDC85CA6NKD9 419 aa8.86□□□□□ -0.99
CLGN-203ENST00000509477 SSFA2P28290 1259 aa8.86□□□□□ -0.99
CLGN-203ENST00000509477 CTCFP49711 727 aaPredicted RBP8.86□□□□□ -0.99
CLGN-203ENST00000509477 MPRIPQ6WCQ1 1025 aa8.86□□□□□ -0.99
CLGN-203ENST00000509477 THAP11Q96EK4 314 aa8.86□□□□□ -0.99
CLGN-203ENST00000509477 ABHD8Q96I13 439 aa8.86□□□□□ -0.99
CLGN-203ENST00000509477 TRAIPQ9BWF2 469 aa8.86□□□□□ -0.99
CLGN-203ENST00000509477 CCDC87Q9NVE4 849 aa8.86□□□□□ -0.99
CLGN-203ENST00000509477 KIAA1210Q9ULL0 1709 aa8.85□□□□□ -0.99
CLGN-203ENST00000509477 EVC2Q86UK5 1308 aa8.85□□□□□ -0.99
CLGN-203ENST00000509477 VEGFAP15692 232 aaPredicted RBP8.85□□□□□ -0.99
CLGN-203ENST00000509477 DPEP1P16444 411 aa8.85□□□□□ -0.99
CLGN-203ENST00000509477 CTDSPL2Q05D32 466 aa8.85□□□□□ -0.99
CLGN-203ENST00000509477 MCM6Q14566 821 aa8.85□□□□□ -0.99
CLGN-203ENST00000509477 SPSB2Q99619 263 aa8.85□□□□□ -0.99
CLGN-203ENST00000509477 SNRKQ9NRH2 765 aa8.85□□□□□ -0.99
CLGN-203ENST00000509477 ZPR1O75312 459 aa8.84□□□□□ -0.99
CLGN-203ENST00000509477 KCNC4Q03721 635 aa8.84□□□□□ -0.99
CLGN-203ENST00000509477 TJAP1Q5JTD0 557 aa8.84□□□□□ -0.99
CLGN-203ENST00000509477 AMIGO3Q86WK7 504 aa8.84□□□□□ -0.99
CLGN-203ENST00000509477 SMARCC1Q92922 1105 aaPredicted RBP8.84□□□□□ -0.99
CLGN-203ENST00000509477 IL21Q9HBE4 155 aa8.84□□□□□ -0.99
CLGN-203ENST00000509477 PIM2Q9P1W9 311 aa8.84□□□□□ -0.99
CLGN-203ENST00000509477 SERPINA10Q9UK55 444 aa8.84□□□□□ -0.99
CLGN-203ENST00000509477 TAF1LQ8IZX4 1826 aa8.83□□□□□ -1
CLGN-203ENST00000509477 USP17L8P0C7I0 530 aa8.83□□□□□ -1
CLGN-203ENST00000509477 LBX1P52954 281 aa8.83□□□□□ -1
CLGN-203ENST00000509477 DALRD3Q5D0E6 543 aaKnown RBP8.83□□□□□ -1
CLGN-203ENST00000509477 Q6ZNB5 142 aa8.83□□□□□ -1
CLGN-203ENST00000509477 PARP3Q9Y6F1 533 aa8.83□□□□□ -1
CLGN-203ENST00000509477 FAM208AQ9UK61 1670 aaKnown RBP8.83□□□□□ -1
CLGN-203ENST00000509477 NBPF1Q3BBV0 1214 aa8.82□□□□□ -1
CLGN-203ENST00000509477 DESI1Q6ICB0 168 aa8.82□□□□□ -1
CLGN-203ENST00000509477 NME9Q86XW9 330 aa8.82□□□□□ -1
CLGN-203ENST00000509477 ZNF516Q92618 1163 aa8.82□□□□□ -1
CLGN-203ENST00000509477 CCDC97Q96F63 343 aaPredicted RBP8.82□□□□□ -1
CLGN-203ENST00000509477 TOGARAM1Q9Y4F4 1720 aa8.82□□□□□ -1
CLGN-203ENST00000509477 UBR3Q6ZT12 1888 aa8.81□□□□□ -1
CLGN-203ENST00000509477 KIAA1551Q9HCM1 1747 aa8.81□□□□□ -1
CLGN-203ENST00000509477 TMF1P82094 1093 aa8.81□□□□□ -1
CLGN-203ENST00000509477 NLGN1Q8N2Q7 840 aa8.81□□□□□ -1
CLGN-203ENST00000509477 RAPGEF4Q8WZA2 1011 aa8.81□□□□□ -1
CLGN-203ENST00000509477 IP6K1Q92551 441 aa8.81□□□□□ -1
CLGN-203ENST00000509477 MEGF6O75095 1541 aa8.8□□□□□ -1
CLGN-203ENST00000509477 KIF13BQ9NQT8 1826 aa8.8□□□□□ -1
CLGN-203ENST00000509477 GLTPD2A6NH11 291 aa8.8□□□□□ -1
CLGN-203ENST00000509477 TLL1O43897 1013 aa8.8□□□□□ -1
CLGN-203ENST00000509477 RAD21O60216 631 aa8.8□□□□□ -1
CLGN-203ENST00000509477 AMPHP49418 695 aa8.8□□□□□ -1
CLGN-203ENST00000509477 TRAPPC3LQ5T215 181 aa8.8□□□□□ -1
CLGN-203ENST00000509477 FAM160A2Q8N612 972 aaPredicted RBP8.8□□□□□ -1
CLGN-203ENST00000509477 LINC00116Q8NCU8 138 aa8.8□□□□□ -1
CLGN-203ENST00000509477 DCAF5Q96JK2 942 aa8.8□□□□□ -1
CLGN-203ENST00000509477 PCDH11XQ9BZA7 1347 aa8.8□□□□□ -1
CLGN-203ENST00000509477 PCDH11YQ9BZA8 1340 aa8.8□□□□□ -1
CLGN-203ENST00000509477 ZC3H4Q9UPT8 1303 aaKnown RBP8.8□□□□□ -1
CLGN-203ENST00000509477 USP31Q70CQ4 1352 aa8.79□□□□□ -1
CLGN-203ENST00000509477 ADH1BP00325 375 aa8.79□□□□□ -1
CLGN-203ENST00000509477 TATP17735 454 aaPredicted RBP8.79□□□□□ -1
CLGN-203ENST00000509477 RASSF7Q02833 373 aa8.79□□□□□ -1
CLGN-203ENST00000509477 MTMR14Q8NCE2 650 aa8.79□□□□□ -1
CLGN-203ENST00000509477 LRRN4Q8WUT4 740 aa8.79□□□□□ -1
CLGN-203ENST00000509477 PRM3Q9NNZ6 103 aa8.79□□□□□ -1
CLGN-203ENST00000509477 RTCBQ9Y3I0 505 aaKnown RBP8.79□□□□□ -1
CLGN-203ENST00000509477 ARFGEF1Q9Y6D6 1849 aa8.79□□□□□ -1
CLGN-203ENST00000509477 CGNL1Q0VF96 1302 aa8.79□□□□□ -1
CLGN-203ENST00000509477 CNTNAP1P78357 1384 aa8.78□□□□□ -1
CLGN-203ENST00000509477 LOC102724428A0A0B4J2F2 783 aa8.78□□□□□ -1
CLGN-203ENST00000509477 PER1O15534 1290 aaPredicted RBP8.78□□□□□ -1
CLGN-203ENST00000509477 JUNDP17535 347 aa8.78□□□□□ -1
CLGN-203ENST00000509477 LMNB1P20700 586 aa8.78□□□□□ -1
CLGN-203ENST00000509477 RFC4P35249 363 aa8.78□□□□□ -1
CLGN-203ENST00000509477 SIK1P57059 783 aa8.78□□□□□ -1
CLGN-203ENST00000509477 MSS51Q4VC12 460 aa8.78□□□□□ -1
CLGN-203ENST00000509477 LYPD8Q6UX82 237 aa8.78□□□□□ -1
CLGN-203ENST00000509477 USHBP1Q8N6Y0 703 aa8.78□□□□□ -1
CLGN-203ENST00000509477 TMC1Q8TDI8 760 aa8.78□□□□□ -1
CLGN-203ENST00000509477 C4AP0C0L4 1744 aa8.77□□□□□ -1
CLGN-203ENST00000509477 KCNA3P22001 575 aa8.77□□□□□ -1.01
CLGN-203ENST00000509477 HDGFL2Q7Z4V5 671 aaPredicted RBP8.77□□□□□ -1.01
CLGN-203ENST00000509477 NKX2-3Q8TAU0 364 aa8.77□□□□□ -1.01
CLGN-203ENST00000509477 MON2Q7Z3U7 1717 aa8.77□□□□□ -1.01
CLGN-203ENST00000509477 BRCA1P38398 1863 aaKnown RBP8.77□□□□□ -1.01
CLGN-203ENST00000509477 CHRNA5P30532 468 aa8.76□□□□□ -1.01
CLGN-203ENST00000509477 HOXC9P31274 260 aa8.76□□□□□ -1.01
CLGN-203ENST00000509477 VEGFBP49765 207 aa8.76□□□□□ -1.01
CLGN-203ENST00000509477 RGS19P49795 217 aa8.76□□□□□ -1.01
CLGN-203ENST00000509477 POM121Q96HA1 1249 aa8.76□□□□□ -1.01
CLGN-203ENST00000509477 SLC6A16Q9GZN6 736 aa8.76□□□□□ -1.01
CLGN-203ENST00000509477 HMX1Q9NP08 348 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms