RNA–Protein interactions for RNA: ENST00000509440.5

TMCC1-209, Transcript of transmembrane and coiled-coil domain family 1, humanhuman

TSL 4

Gene TMCC1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1-209ENST00000509440 SYNE4Q8N205 404 aa9.59□□□□□ -0.87
TMCC1-209ENST00000509440 SMC1BQ8NDV3 1235 aa9.59□□□□□ -0.87
TMCC1-209ENST00000509440 PLBD2Q8NHP8 589 aa9.59□□□□□ -0.87
TMCC1-209ENST00000509440 RYDENQ9NUL5 291 aaKnown RBP9.59□□□□□ -0.87
TMCC1-209ENST00000509440 HYPKQ9NX55 129 aa9.59□□□□□ -0.87
TMCC1-209ENST00000509440 TRMT112Q9UI30 125 aaKnown RBP9.59□□□□□ -0.87
TMCC1-209ENST00000509440 POTECB2RU33 542 aa9.58□□□□□ -0.88
TMCC1-209ENST00000509440 IARSP41252 1262 aaKnown RBP9.58□□□□□ -0.88
TMCC1-209ENST00000509440 HTRA3P83110 453 aa9.58□□□□□ -0.88
TMCC1-209ENST00000509440 ANKRD13DQ6ZTN6 518 aa9.58□□□□□ -0.88
TMCC1-209ENST00000509440 PIP4P2Q8N4L2 257 aa9.58□□□□□ -0.88
TMCC1-209ENST00000509440 CRAMP1Q96RY5 1269 aa9.58□□□□□ -0.88
TMCC1-209ENST00000509440 ANKRD36CQ5JPF3 1778 aa9.58□□□□□ -0.88
TMCC1-209ENST00000509440 ZNF541Q9H0D2 1346 aa9.57□□□□□ -0.88
TMCC1-209ENST00000509440 WDR90Q96KV7 1748 aa9.57□□□□□ -0.88
TMCC1-209ENST00000509440 ATP5J2-PTCD1G3V325 749 aa9.57□□□□□ -0.88
TMCC1-209ENST00000509440 STK25O00506 426 aa9.57□□□□□ -0.88
TMCC1-209ENST00000509440 HNRNPUQ00839 825 aaKnown RBP eCLIP9.57□□□□□ -0.88
TMCC1-209ENST00000509440 RTL5Q5HYW3 569 aaPredicted RBP9.57□□□□□ -0.88
TMCC1-209ENST00000509440 SLC10A5Q5PT55 438 aa9.57□□□□□ -0.88
TMCC1-209ENST00000509440 CC2D2BQ6DHV5 1058 aa9.57□□□□□ -0.88
TMCC1-209ENST00000509440 C8orf58Q8NAV2 365 aa9.57□□□□□ -0.88
TMCC1-209ENST00000509440 TSR2Q969E8 191 aaKnown RBP9.57□□□□□ -0.88
TMCC1-209ENST00000509440 TMX4Q9H1E5 349 aaPredicted RBP9.57□□□□□ -0.88
TMCC1-209ENST00000509440 PHAXQ9H814 394 aaKnown RBP9.57□□□□□ -0.88
TMCC1-209ENST00000509440 SALL2Q9Y467 1007 aaPredicted RBP9.57□□□□□ -0.88
TMCC1-209ENST00000509440 ABCC4O15439 1325 aa9.56□□□□□ -0.88
TMCC1-209ENST00000509440 RNF123Q5XPI4 1314 aa9.56□□□□□ -0.88
TMCC1-209ENST00000509440 SH3TC1Q8TE82 1336 aa9.56□□□□□ -0.88
TMCC1-209ENST00000509440 DICER1Q9UPY3 1922 aaKnown RBP9.56□□□□□ -0.88
TMCC1-209ENST00000509440 PITPNM1O00562 1244 aa9.56□□□□□ -0.88
TMCC1-209ENST00000509440 GOLGA2Q08379 1002 aa9.56□□□□□ -0.88
TMCC1-209ENST00000509440 RIC3Q7Z5B4 369 aa9.56□□□□□ -0.88
TMCC1-209ENST00000509440 JDP2Q8WYK2 163 aa9.56□□□□□ -0.88
TMCC1-209ENST00000509440 FAM89AQ96GI7 184 aa9.56□□□□□ -0.88
TMCC1-209ENST00000509440 PSMD1Q99460 953 aa9.56□□□□□ -0.88
TMCC1-209ENST00000509440 SNED1Q8TER0 1413 aa9.56□□□□□ -0.88
TMCC1-209ENST00000509440 POTEIP0CG38 1075 aa9.55□□□□□ -0.88
TMCC1-209ENST00000509440 POTEJP0CG39 1038 aa9.55□□□□□ -0.88
TMCC1-209ENST00000509440 CCDC30Q5VVM6 783 aa9.55□□□□□ -0.88
TMCC1-209ENST00000509440 DDX46Q7L014 1031 aaKnown RBP9.55□□□□□ -0.88
TMCC1-209ENST00000509440 WWC1Q8IX03 1113 aa9.55□□□□□ -0.88
TMCC1-209ENST00000509440 LARGE2Q8N3Y3 721 aa9.55□□□□□ -0.88
TMCC1-209ENST00000509440 TSPYL6Q8N831 410 aa9.55□□□□□ -0.88
TMCC1-209ENST00000509440 MYD88Q99836 296 aa9.55□□□□□ -0.88
TMCC1-209ENST00000509440 ISCA1Q9BUE6 129 aa9.55□□□□□ -0.88
TMCC1-209ENST00000509440 GJA3Q9Y6H8 435 aa9.55□□□□□ -0.88
TMCC1-209ENST00000509440 IQCA1LA6NCM1 817 aa9.54□□□□□ -0.88
TMCC1-209ENST00000509440 PPIP5K2O43314 1243 aa9.54□□□□□ -0.88
TMCC1-209ENST00000509440 EIF6P56537 245 aaKnown RBP9.54□□□□□ -0.88
TMCC1-209ENST00000509440 GRAPQ13588 217 aa9.54□□□□□ -0.88
TMCC1-209ENST00000509440 AOC3Q16853 763 aa9.54□□□□□ -0.88
TMCC1-209ENST00000509440 CCDC27Q2M243 656 aa9.54□□□□□ -0.88
TMCC1-209ENST00000509440 GRIPAP1Q4V328 841 aa9.54□□□□□ -0.88
TMCC1-209ENST00000509440 EAPPQ56P03 285 aaPredicted RBP9.54□□□□□ -0.88
TMCC1-209ENST00000509440 GRAPLQ8TC17 118 aaPredicted RBP9.54□□□□□ -0.88
TMCC1-209ENST00000509440 ATP6V0A2Q9Y487 856 aa9.54□□□□□ -0.88
TMCC1-209ENST00000509440 LAMB2P55268 1798 aa9.54□□□□□ -0.88
TMCC1-209ENST00000509440 COL4A5P29400 1685 aa9.54□□□□□ -0.88
TMCC1-209ENST00000509440 FZD9O00144 591 aa9.53□□□□□ -0.88
TMCC1-209ENST00000509440 IRS4O14654 1257 aaPredicted RBP9.53□□□□□ -0.88
TMCC1-209ENST00000509440 BBOX1O75936 387 aa9.53□□□□□ -0.88
TMCC1-209ENST00000509440 CHADLQ6NUI6 762 aa9.53□□□□□ -0.88
TMCC1-209ENST00000509440 DPP8Q6V1X1 898 aaPredicted RBP9.53□□□□□ -0.88
TMCC1-209ENST00000509440 NIM1KQ8IY84 436 aa9.53□□□□□ -0.88
TMCC1-209ENST00000509440 DNAJC5GQ8N7S2 189 aa9.53□□□□□ -0.88
TMCC1-209ENST00000509440 L3MBTL3Q96JM7 780 aaPredicted RBP9.53□□□□□ -0.88
TMCC1-209ENST00000509440 STK31Q9BXU1 1019 aa9.53□□□□□ -0.88
TMCC1-209ENST00000509440 TAF1DQ9H5J8 278 aaPredicted RBP9.53□□□□□ -0.88
TMCC1-209ENST00000509440 HACL1Q9UJ83 578 aa9.53□□□□□ -0.88
TMCC1-209ENST00000509440 ZBED9Q6R2W3 1325 aa9.53□□□□□ -0.88
TMCC1-209ENST00000509440 DDX58O95786 925 aaKnown RBP9.52□□□□□ -0.89
TMCC1-209ENST00000509440 EPHX2P34913 555 aa9.52□□□□□ -0.89
TMCC1-209ENST00000509440 FXR2P51116 673 aaKnown RBP eCLIP9.52□□□□□ -0.89
TMCC1-209ENST00000509440 NUBP1P53384 320 aa9.52□□□□□ -0.89
TMCC1-209ENST00000509440 TWISTNBQ3B726 338 aaPredicted RBP9.52□□□□□ -0.89
TMCC1-209ENST00000509440 SP8Q8IXZ3 490 aa9.52□□□□□ -0.89
TMCC1-209ENST00000509440 DDX60Q8IY21 1712 aaKnown RBP9.52□□□□□ -0.89
TMCC1-209ENST00000509440 GPC2Q8N158 579 aa9.52□□□□□ -0.89
TMCC1-209ENST00000509440 MPNDQ8N594 471 aa9.52□□□□□ -0.89
TMCC1-209ENST00000509440 SUPT20HQ8NEM7 779 aa9.52□□□□□ -0.89
TMCC1-209ENST00000509440 JARID2Q92833 1246 aaPredicted RBP9.52□□□□□ -0.89
TMCC1-209ENST00000509440 CHMP4AQ9BY43 222 aa9.52□□□□□ -0.89
TMCC1-209ENST00000509440 CLEC11AQ9Y240 323 aa9.52□□□□□ -0.89
TMCC1-209ENST00000509440 IL16Q14005 1332 aa9.52□□□□□ -0.89
TMCC1-209ENST00000509440 LMOD1P29536 600 aaPredicted RBP9.51□□□□□ -0.89
TMCC1-209ENST00000509440 TRIM28Q13263 835 aaKnown RBP9.51□□□□□ -0.89
TMCC1-209ENST00000509440 LDHDQ86WU2 507 aa9.51□□□□□ -0.89
TMCC1-209ENST00000509440 ZBTB38Q8NAP3 1195 aaPredicted RBP9.51□□□□□ -0.89
TMCC1-209ENST00000509440 CELF1Q92879 486 aaKnown RBP9.51□□□□□ -0.89
TMCC1-209ENST00000509440 KLRG1Q96E93 195 aa9.51□□□□□ -0.89
TMCC1-209ENST00000509440 METTL22Q9BUU2 404 aaPredicted RBP9.51□□□□□ -0.89
TMCC1-209ENST00000509440 CWC25Q9NXE8 425 aaPredicted RBP9.51□□□□□ -0.89
TMCC1-209ENST00000509440 MAP3K2Q9Y2U5 619 aa9.51□□□□□ -0.89
TMCC1-209ENST00000509440 FANCIQ9NVI1 1328 aa9.51□□□□□ -0.89
TMCC1-209ENST00000509440 PI4KAP2A4QPH2 592 aa9.5□□□□□ -0.89
TMCC1-209ENST00000509440 PCCAP05165 728 aaPredicted RBP9.5□□□□□ -0.89
TMCC1-209ENST00000509440 SF3B3Q15393 1217 aaKnown RBP9.5□□□□□ -0.89
TMCC1-209ENST00000509440 G2E3Q7L622 706 aa9.5□□□□□ -0.89
TMCC1-209ENST00000509440 TMC4Q7Z404 712 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms