RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 CELF1Q92879 486 aaKnown RBP20.61■□□□□ 0.89
PDLIM5-212ENST00000509333 ARFGEF2Q9Y6D5 1785 aa20.61■□□□□ 0.89
PDLIM5-212ENST00000509333 POTECB2RU33 542 aa20.6■□□□□ 0.89
PDLIM5-212ENST00000509333 F6X3S4 739 aa20.6■□□□□ 0.89
PDLIM5-212ENST00000509333 IARSP41252 1262 aaKnown RBP20.6■□□□□ 0.89
PDLIM5-212ENST00000509333 RPS8P62241 208 aaKnown RBP20.6■□□□□ 0.89
PDLIM5-212ENST00000509333 GCKRQ14397 625 aa20.6■□□□□ 0.89
PDLIM5-212ENST00000509333 LINS1Q8NG48 757 aa20.6■□□□□ 0.89
PDLIM5-212ENST00000509333 CACNA1FO60840 1977 aa20.59■□□□□ 0.89
PDLIM5-212ENST00000509333 CDHR2Q9BYE9 1310 aa20.59■□□□□ 0.89
PDLIM5-212ENST00000509333 CACNA1SQ13698 1873 aa20.59■□□□□ 0.89
PDLIM5-212ENST00000509333 TMC4Q7Z404 712 aa20.59■□□□□ 0.89
PDLIM5-212ENST00000509333 MRPL50Q8N5N7 158 aaKnown RBP20.59■□□□□ 0.89
PDLIM5-212ENST00000509333 TMX4Q9H1E5 349 aaPredicted RBP20.59■□□□□ 0.89
PDLIM5-212ENST00000509333 SEC31BQ9NQW1 1179 aa20.59■□□□□ 0.89
PDLIM5-212ENST00000509333 BEND3Q5T5X7 828 aa20.58■□□□□ 0.89
PDLIM5-212ENST00000509333 RTFDC1Q9BY42 306 aaPredicted RBP20.58■□□□□ 0.89
PDLIM5-212ENST00000509333 FZD9O00144 591 aa20.57■□□□□ 0.88
PDLIM5-212ENST00000509333 TOMM70O94826 608 aa20.57■□□□□ 0.88
PDLIM5-212ENST00000509333 VEGFAP15692 232 aaPredicted RBP20.57■□□□□ 0.88
PDLIM5-212ENST00000509333 CASP7P55210 303 aa20.57■□□□□ 0.88
PDLIM5-212ENST00000509333 MPNDQ8N594 471 aa20.57■□□□□ 0.88
PDLIM5-212ENST00000509333 TTLL11Q8NHH1 800 aa20.57■□□□□ 0.88
PDLIM5-212ENST00000509333 SSH1Q8WYL5 1049 aa20.57■□□□□ 0.88
PDLIM5-212ENST00000509333 VPS33BQ9H267 617 aa20.57■□□□□ 0.88
PDLIM5-212ENST00000509333 DDNO94850 711 aaPredicted RBP20.56■□□□□ 0.88
PDLIM5-212ENST00000509333 CCDC152Q4G0S7 254 aa20.56■□□□□ 0.88
PDLIM5-212ENST00000509333 PLA2G12BQ9BX93 195 aa20.55■□□□□ 0.88
PDLIM5-212ENST00000509333 DICER1Q9UPY3 1922 aaKnown RBP20.55■□□□□ 0.88
PDLIM5-212ENST00000509333 TAF1P21675 1872 aa20.54■□□□□ 0.88
PDLIM5-212ENST00000509333 DDX60Q8IY21 1712 aaKnown RBP20.54■□□□□ 0.88
PDLIM5-212ENST00000509333 DPP8Q6V1X1 898 aaPredicted RBP20.54■□□□□ 0.88
PDLIM5-212ENST00000509333 UBE3BQ7Z3V4 1068 aa20.54■□□□□ 0.88
PDLIM5-212ENST00000509333 JDP2Q8WYK2 163 aa20.54■□□□□ 0.88
PDLIM5-212ENST00000509333 CCDC85AQ96PX6 553 aaPredicted RBP20.54■□□□□ 0.88
PDLIM5-212ENST00000509333 LAMB2P55268 1798 aa20.54■□□□□ 0.88
PDLIM5-212ENST00000509333 LARGE2Q8N3Y3 721 aa20.53■□□□□ 0.88
PDLIM5-212ENST00000509333 SUPT20HQ8NEM7 779 aa20.53■□□□□ 0.88
PDLIM5-212ENST00000509333 CSF1RP07333 972 aa20.52■□□□□ 0.88
PDLIM5-212ENST00000509333 CTSWP56202 376 aa20.52■□□□□ 0.88
PDLIM5-212ENST00000509333 ALDH1L2Q3SY69 923 aa20.52■□□□□ 0.88
PDLIM5-212ENST00000509333 NSFL1CQ9UNZ2 370 aaKnown RBP20.52■□□□□ 0.88
PDLIM5-212ENST00000509333 CT47B1P0C2W7 299 aaPredicted RBP20.51■□□□□ 0.87
PDLIM5-212ENST00000509333 GPSM2P81274 684 aa20.51■□□□□ 0.87
PDLIM5-212ENST00000509333 RBM46Q8TBY0 533 aaKnown RBP20.51■□□□□ 0.87
PDLIM5-212ENST00000509333 PPIP5K2O43314 1243 aa20.5■□□□□ 0.87
PDLIM5-212ENST00000509333 ALDH1L1O75891 902 aa20.5■□□□□ 0.87
PDLIM5-212ENST00000509333 SLC4A10Q6U841 1118 aa20.5■□□□□ 0.87
PDLIM5-212ENST00000509333 C16orf71Q8IYS4 520 aaPredicted RBP20.5■□□□□ 0.87
PDLIM5-212ENST00000509333 GREM2Q9H772 168 aa20.5■□□□□ 0.87
PDLIM5-212ENST00000509333 POLLQ9UGP5 575 aa20.5■□□□□ 0.87
PDLIM5-212ENST00000509333 ZNF541Q9H0D2 1346 aa20.5■□□□□ 0.87
PDLIM5-212ENST00000509333 KIAA2012Q0VF49 1180 aa20.49■□□□□ 0.87
PDLIM5-212ENST00000509333 AOC3Q16853 763 aa20.49■□□□□ 0.87
PDLIM5-212ENST00000509333 L3MBTL3Q96JM7 780 aaPredicted RBP20.49■□□□□ 0.87
PDLIM5-212ENST00000509333 EIF6P56537 245 aaKnown RBP20.48■□□□□ 0.87
PDLIM5-212ENST00000509333 FOXO4P98177 505 aa20.48■□□□□ 0.87
PDLIM5-212ENST00000509333 ANKRD18AQ8IVF6 992 aa20.48■□□□□ 0.87
PDLIM5-212ENST00000509333 SRCIN1Q9C0H9 1055 aa20.48■□□□□ 0.87
PDLIM5-212ENST00000509333 PODXL2Q9NZ53 605 aa20.48■□□□□ 0.87
PDLIM5-212ENST00000509333 ZNRF3Q9ULT6 936 aa20.48■□□□□ 0.87
PDLIM5-212ENST00000509333 PTPRCP08575 1304 aa20.48■□□□□ 0.87
PDLIM5-212ENST00000509333 BRPF1P55201 1214 aaPredicted RBP20.47■□□□□ 0.87
PDLIM5-212ENST00000509333 NIM1KQ8IY84 436 aa20.47■□□□□ 0.87
PDLIM5-212ENST00000509333 GPC2Q8N158 579 aa20.47■□□□□ 0.87
PDLIM5-212ENST00000509333 TBC1D16Q8TBP0 767 aa20.47■□□□□ 0.87
PDLIM5-212ENST00000509333 CDC5LQ99459 802 aaKnown RBP20.47■□□□□ 0.87
PDLIM5-212ENST00000509333 BCL2L13Q9BXK5 485 aa20.47■□□□□ 0.87
PDLIM5-212ENST00000509333 BSDC1Q9NW68 430 aaPredicted RBP20.47■□□□□ 0.87
PDLIM5-212ENST00000509333 COL4A1P02462 1669 aa20.47■□□□□ 0.87
PDLIM5-212ENST00000509333 COL4A5P29400 1685 aa20.47■□□□□ 0.87
PDLIM5-212ENST00000509333 RTL9Q8NET4 1388 aa20.46■□□□□ 0.87
PDLIM5-212ENST00000509333 C6orf229H3BNL8 230 aa20.46■□□□□ 0.87
PDLIM5-212ENST00000509333 GRM8O00222 908 aa20.46■□□□□ 0.87
PDLIM5-212ENST00000509333 HNRNPUQ00839 825 aaKnown RBP eCLIP20.46■□□□□ 0.87
PDLIM5-212ENST00000509333 CXCL9Q07325 125 aa20.46■□□□□ 0.87
PDLIM5-212ENST00000509333 WASHC4Q2M389 1173 aa20.46■□□□□ 0.87
PDLIM5-212ENST00000509333 EPHA10Q5JZY3 1008 aa20.46■□□□□ 0.87
PDLIM5-212ENST00000509333 C9orf78Q9NZ63 289 aaPredicted RBP20.46■□□□□ 0.87
PDLIM5-212ENST00000509333 FSTL1Q12841 308 aa20.45■□□□□ 0.86
PDLIM5-212ENST00000509333 MINPP1Q9UNW1 487 aa20.45■□□□□ 0.86
PDLIM5-212ENST00000509333 RIMBP2O15034 1052 aa20.44■□□□□ 0.86
PDLIM5-212ENST00000509333 HSPA6P17066 643 aa20.44■□□□□ 0.86
PDLIM5-212ENST00000509333 RARSP54136 660 aaKnown RBP20.44■□□□□ 0.86
PDLIM5-212ENST00000509333 TAF1DQ9H5J8 278 aaPredicted RBP20.44■□□□□ 0.86
PDLIM5-212ENST00000509333 SMC4Q9NTJ3 1288 aa20.44■□□□□ 0.86
PDLIM5-212ENST00000509333 GJA3Q9Y6H8 435 aa20.44■□□□□ 0.86
PDLIM5-212ENST00000509333 IQCA1LA6NCM1 817 aa20.43■□□□□ 0.86
PDLIM5-212ENST00000509333 WTIPA6NIX2 430 aaPredicted RBP20.43■□□□□ 0.86
PDLIM5-212ENST00000509333 NBPF7P0C2Y1 421 aaPredicted RBP20.43■□□□□ 0.86
PDLIM5-212ENST00000509333 ITGA6P23229 1130 aa20.43■□□□□ 0.86
PDLIM5-212ENST00000509333 KAZALD1Q96I82 304 aa20.43■□□□□ 0.86
PDLIM5-212ENST00000509333 ANKIB1Q9P2G1 1089 aa20.43■□□□□ 0.86
PDLIM5-212ENST00000509333 NOB1Q9ULX3 412 aaKnown RBP20.43■□□□□ 0.86
PDLIM5-212ENST00000509333 WDR90Q96KV7 1748 aa20.43■□□□□ 0.86
PDLIM5-212ENST00000509333 UTYO14607 1347 aa20.43■□□□□ 0.86
PDLIM5-212ENST00000509333 TIAM2Q8IVF5 1701 aa20.42■□□□□ 0.86
PDLIM5-212ENST00000509333 YDJCA8MPS7 323 aa20.42■□□□□ 0.86
PDLIM5-212ENST00000509333 FAM161AQ3B820 660 aa20.42■□□□□ 0.86
PDLIM5-212ENST00000509333 LMBR1LQ6UX01 489 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 238.8 ms