RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 ADAMTS4O75173 837 aa5.97□□□□□ -1.45
XRCC4-204ENST00000509268 ATP1A2P50993 1020 aa5.97□□□□□ -1.45
XRCC4-204ENST00000509268 PLAURQ03405 335 aa5.97□□□□□ -1.45
XRCC4-204ENST00000509268 NEUROD2Q15784 382 aa5.97□□□□□ -1.45
XRCC4-204ENST00000509268 TPCN2Q8NHX9 752 aa5.97□□□□□ -1.45
XRCC4-204ENST00000509268 ADGRE2Q9UHX3 823 aa5.97□□□□□ -1.45
XRCC4-204ENST00000509268 TGFBR3LH3BV60 316 aa5.96□□□□□ -1.46
XRCC4-204ENST00000509268 ABL2P42684 1182 aa5.96□□□□□ -1.46
XRCC4-204ENST00000509268 NFIAQ12857 509 aa5.96□□□□□ -1.46
XRCC4-204ENST00000509268 CCDC102BQ68D86 513 aa5.96□□□□□ -1.46
XRCC4-204ENST00000509268 SMG9Q9H0W8 520 aaKnown RBP5.96□□□□□ -1.46
XRCC4-204ENST00000509268 GDPD2Q9HCC8 539 aa5.96□□□□□ -1.46
XRCC4-204ENST00000509268 GLB1P16278 677 aa5.95□□□□□ -1.46
XRCC4-204ENST00000509268 DMGDHQ9UI17 866 aaKnown RBP5.95□□□□□ -1.46
XRCC4-204ENST00000509268 NRLP54845 237 aa5.94□□□□□ -1.46
XRCC4-204ENST00000509268 CACTIN-AS1Q8N1I8 211 aa5.94□□□□□ -1.46
XRCC4-204ENST00000509268 C2orf49Q9BVC5 232 aaPredicted RBP5.94□□□□□ -1.46
XRCC4-204ENST00000509268 CEP41Q9BYV8 373 aa5.94□□□□□ -1.46
XRCC4-204ENST00000509268 ZFATQ9P243 1243 aa5.94□□□□□ -1.46
XRCC4-204ENST00000509268 RTN1Q16799 776 aa5.93□□□□□ -1.46
XRCC4-204ENST00000509268 UVSSAQ2YD98 709 aa5.93□□□□□ -1.46
XRCC4-204ENST00000509268 RNF43Q68DV7 783 aa5.93□□□□□ -1.46
XRCC4-204ENST00000509268 DBNDD2Q9BQY9 259 aa5.93□□□□□ -1.46
XRCC4-204ENST00000509268 MUC3BQ9H195 1237 aa5.93□□□□□ -1.46
XRCC4-204ENST00000509268 ATAD2Q6PL18 1390 aa5.93□□□□□ -1.46
XRCC4-204ENST00000509268 PRR19A6NJB7 356 aa5.93□□□□□ -1.46
XRCC4-204ENST00000509268 USP17L5A8MUK1 530 aa5.93□□□□□ -1.46
XRCC4-204ENST00000509268 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.93□□□□□ -1.46
XRCC4-204ENST00000509268 LARGE2Q8N3Y3 721 aa5.93□□□□□ -1.46
XRCC4-204ENST00000509268 IFT43Q96FT9 208 aa5.93□□□□□ -1.46
XRCC4-204ENST00000509268 UBL7Q96S82 380 aaPredicted RBP5.93□□□□□ -1.46
XRCC4-204ENST00000509268 ALG2Q9H553 416 aa5.93□□□□□ -1.46
XRCC4-204ENST00000509268 C21orf2O43822 256 aa5.92□□□□□ -1.46
XRCC4-204ENST00000509268 RARAP10276 462 aa5.92□□□□□ -1.46
XRCC4-204ENST00000509268 INPP5BP32019 993 aa5.92□□□□□ -1.46
XRCC4-204ENST00000509268 MLLT1Q03111 559 aaPredicted RBP5.92□□□□□ -1.46
XRCC4-204ENST00000509268 SETDB1Q15047 1291 aa5.92□□□□□ -1.46
XRCC4-204ENST00000509268 IL22RA1Q8N6P7 574 aa5.92□□□□□ -1.46
XRCC4-204ENST00000509268 POU5F2Q8N7G0 328 aa5.92□□□□□ -1.46
XRCC4-204ENST00000509268 PALM3A6NDB9 673 aaPredicted RBP5.91□□□□□ -1.46
XRCC4-204ENST00000509268 EIF2AK2P19525 551 aaKnown RBP5.91□□□□□ -1.46
XRCC4-204ENST00000509268 TARSP26639 723 aaKnown RBP5.91□□□□□ -1.46
XRCC4-204ENST00000509268 OGFOD2Q6N063 350 aa5.91□□□□□ -1.46
XRCC4-204ENST00000509268 PLEKHM2Q8IWE5 1019 aa5.91□□□□□ -1.46
XRCC4-204ENST00000509268 ARMC10Q8N2F6 343 aa5.91□□□□□ -1.46
XRCC4-204ENST00000509268 PLD4Q96BZ4 506 aa5.91□□□□□ -1.46
XRCC4-204ENST00000509268 TLR7Q9NYK1 1049 aaKnown RBP5.91□□□□□ -1.46
XRCC4-204ENST00000509268 KIAA1024Q9UPX6 916 aa5.91□□□□□ -1.46
XRCC4-204ENST00000509268 RBM19Q9Y4C8 960 aaKnown RBP5.91□□□□□ -1.46
XRCC4-204ENST00000509268 GRNP28799 593 aaKnown RBP5.9□□□□□ -1.46
XRCC4-204ENST00000509268 KRT25Q7Z3Z0 450 aa5.9□□□□□ -1.46
XRCC4-204ENST00000509268 DEPDC4Q8N2C3 294 aa5.9□□□□□ -1.46
XRCC4-204ENST00000509268 AGGF1Q8N302 714 aaeCLIP5.9□□□□□ -1.46
XRCC4-204ENST00000509268 ASIC4Q96FT7 647 aa5.9□□□□□ -1.46
XRCC4-204ENST00000509268 NGLY1Q96IV0 654 aa5.9□□□□□ -1.46
XRCC4-204ENST00000509268 C7orf69Q9H7B7 122 aa5.9□□□□□ -1.46
XRCC4-204ENST00000509268 BCS1LQ9Y276 419 aa5.9□□□□□ -1.46
XRCC4-204ENST00000509268 C8AP07357 584 aa5.89□□□□□ -1.47
XRCC4-204ENST00000509268 CLDN10P78369 228 aa5.89□□□□□ -1.47
XRCC4-204ENST00000509268 HFE2Q6ZVN8 426 aa5.89□□□□□ -1.47
XRCC4-204ENST00000509268 TRIM42Q8IWZ5 723 aa5.89□□□□□ -1.47
XRCC4-204ENST00000509268 RBSNQ9H1K0 784 aa5.89□□□□□ -1.47
XRCC4-204ENST00000509268 LOC102724428A0A0B4J2F2 783 aa5.89□□□□□ -1.47
XRCC4-204ENST00000509268 SASH3O75995 380 aa5.89□□□□□ -1.47
XRCC4-204ENST00000509268 IDH3AP50213 366 aa5.89□□□□□ -1.47
XRCC4-204ENST00000509268 ARSDP51689 593 aa5.89□□□□□ -1.47
XRCC4-204ENST00000509268 SIK1P57059 783 aa5.89□□□□□ -1.47
XRCC4-204ENST00000509268 GDF6Q6KF10 455 aaPredicted RBP5.89□□□□□ -1.47
XRCC4-204ENST00000509268 CLEC10AQ8IUN9 316 aa5.89□□□□□ -1.47
XRCC4-204ENST00000509268 SIX5Q8N196 739 aa5.89□□□□□ -1.47
XRCC4-204ENST00000509268 TSEN2Q8NCE0 465 aaKnown RBP5.89□□□□□ -1.47
XRCC4-204ENST00000509268 UTP4Q969X6 686 aaKnown RBP5.89□□□□□ -1.47
XRCC4-204ENST00000509268 FAM46AQ96IP4 442 aaKnown RBP5.89□□□□□ -1.47
XRCC4-204ENST00000509268 GHRHP01286 108 aa5.88□□□□□ -1.47
XRCC4-204ENST00000509268 SCG3Q8WXD2 468 aaKnown RBP5.88□□□□□ -1.47
XRCC4-204ENST00000509268 FAM83CQ9BQN1 747 aa5.88□□□□□ -1.47
XRCC4-204ENST00000509268 EGFRP00533 1210 aa5.87□□□□□ -1.47
XRCC4-204ENST00000509268 OGFOD1Q8N543 542 aa5.87□□□□□ -1.47
XRCC4-204ENST00000509268 PPME1Q9Y570 386 aa5.87□□□□□ -1.47
XRCC4-204ENST00000509268 HMX2A2RU54 273 aa5.86□□□□□ -1.47
XRCC4-204ENST00000509268 PSAPP07602 524 aa5.86□□□□□ -1.47
XRCC4-204ENST00000509268 HOXD8P13378 290 aaPredicted RBP5.86□□□□□ -1.47
XRCC4-204ENST00000509268 ABI1Q8IZP0 508 aa5.86□□□□□ -1.47
XRCC4-204ENST00000509268 SHKBP1Q8TBC3 707 aa5.86□□□□□ -1.47
XRCC4-204ENST00000509268 CHMP7Q8WUX9 453 aaPredicted RBP5.86□□□□□ -1.47
XRCC4-204ENST00000509268 MYRFLQ96LU7 910 aa5.86□□□□□ -1.47
XRCC4-204ENST00000509268 USP17L3A6NCW0 530 aa5.85□□□□□ -1.47
XRCC4-204ENST00000509268 USP17L4A6NCW7 530 aa5.85□□□□□ -1.47
XRCC4-204ENST00000509268 JUNBP17275 347 aaPredicted RBP5.85□□□□□ -1.47
XRCC4-204ENST00000509268 USP17L2Q6R6M4 530 aa5.85□□□□□ -1.47
XRCC4-204ENST00000509268 USP17L1Q7RTZ2 530 aa5.85□□□□□ -1.47
XRCC4-204ENST00000509268 WWC1Q8IX03 1113 aa5.85□□□□□ -1.47
XRCC4-204ENST00000509268 J3QW42 95 aa5.84□□□□□ -1.47
XRCC4-204ENST00000509268 DKK1O94907 266 aa5.84□□□□□ -1.47
XRCC4-204ENST00000509268 CD68P34810 354 aaPredicted RBP5.84□□□□□ -1.47
XRCC4-204ENST00000509268 SOX18P35713 384 aa5.84□□□□□ -1.47
XRCC4-204ENST00000509268 ACAD11Q709F0 780 aa5.84□□□□□ -1.47
XRCC4-204ENST00000509268 CBLL1Q75N03 491 aa5.84□□□□□ -1.47
XRCC4-204ENST00000509268 FAM20CQ8IXL6 584 aa5.84□□□□□ -1.47
XRCC4-204ENST00000509268 KRTAP4-11Q9BYQ6 195 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms