RNA–Protein interactions for RNA: ENST00000508532.5

ATP2C1-214, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,969 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-214ENST00000508532 CCDC34Q96HJ3 373 aa17.07■□□□□ 0.32
ATP2C1-214ENST00000508532 NLRP2Q9NX02 1062 aa17.07■□□□□ 0.32
ATP2C1-214ENST00000508532 FLT4P35916 1363 aa17.07■□□□□ 0.32
ATP2C1-214ENST00000508532 A0A1B0GVL5 298 aa17.07■□□□□ 0.32
ATP2C1-214ENST00000508532 NCBP1Q09161 790 aaKnown RBP17.07■□□□□ 0.32
ATP2C1-214ENST00000508532 RBM33Q96EV2 1170 aaKnown RBP17.07■□□□□ 0.32
ATP2C1-214ENST00000508532 DHX16O60231 1041 aaKnown RBP17.07■□□□□ 0.32
ATP2C1-214ENST00000508532 APOBRQ0VD83 1088 aa17.07■□□□□ 0.32
ATP2C1-214ENST00000508532 ZFP91Q96JP5 570 aaPredicted RBP17.07■□□□□ 0.32
ATP2C1-214ENST00000508532 ARID5BQ14865 1188 aa17.06■□□□□ 0.32
ATP2C1-214ENST00000508532 IL17REQ8NFR9 667 aa17.06■□□□□ 0.32
ATP2C1-214ENST00000508532 GOLIM4O00461 696 aa17.06■□□□□ 0.32
ATP2C1-214ENST00000508532 HAND2P61296 217 aa17.06■□□□□ 0.32
ATP2C1-214ENST00000508532 PI4K2BQ8TCG2 481 aa17.06■□□□□ 0.32
ATP2C1-214ENST00000508532 GRM8O00222 908 aa17.06■□□□□ 0.32
ATP2C1-214ENST00000508532 RAPGEF4Q8WZA2 1011 aa17.06■□□□□ 0.32
ATP2C1-214ENST00000508532 TM6SF1Q9BZW5 370 aa17.06■□□□□ 0.32
ATP2C1-214ENST00000508532 AMOTL2Q9Y2J4 779 aa17.06■□□□□ 0.32
ATP2C1-214ENST00000508532 ERO1AQ96HE7 468 aa17.06■□□□□ 0.32
ATP2C1-214ENST00000508532 EPB41L2O43491 1005 aaKnown RBP17.05■□□□□ 0.32
ATP2C1-214ENST00000508532 A0A0D9SFI3 127 aa17.05■□□□□ 0.32
ATP2C1-214ENST00000508532 GABPB1Q06547 395 aaPredicted RBP17.05■□□□□ 0.32
ATP2C1-214ENST00000508532 TOP1P11387 765 aaKnown RBP17.05■□□□□ 0.32
ATP2C1-214ENST00000508532 LRRFIP1Q32MZ4 808 aaKnown RBP17.05■□□□□ 0.32
ATP2C1-214ENST00000508532 HSP90B2PQ58FF3 399 aa17.05■□□□□ 0.32
ATP2C1-214ENST00000508532 MRPS27Q92552 414 aaKnown RBP17.05■□□□□ 0.32
ATP2C1-214ENST00000508532 LGR6Q9HBX8 967 aa17.05■□□□□ 0.32
ATP2C1-214ENST00000508532 NCOA5Q9HCD5 579 aaKnown RBP17.05■□□□□ 0.32
ATP2C1-214ENST00000508532 HOOK1Q9UJC3 728 aaKnown RBP17.05■□□□□ 0.32
ATP2C1-214ENST00000508532 PTPDC1A2A3K4 754 aa17.04■□□□□ 0.32
ATP2C1-214ENST00000508532 VGLL3A8MV65 326 aa17.04■□□□□ 0.32
ATP2C1-214ENST00000508532 TTC14Q96N46 770 aa17.04■□□□□ 0.32
ATP2C1-214ENST00000508532 AATKQ6ZMQ8 1374 aa17.04■□□□□ 0.32
ATP2C1-214ENST00000508532 RPAP1Q9BWH6 1393 aaPredicted RBP17.04■□□□□ 0.32
ATP2C1-214ENST00000508532 SETBP1Q9Y6X0 1596 aa17.04■□□□□ 0.32
ATP2C1-214ENST00000508532 ADGRB3O60242 1522 aa17.04■□□□□ 0.32
ATP2C1-214ENST00000508532 SHPRHQ149N8 1683 aa17.04■□□□□ 0.32
ATP2C1-214ENST00000508532 ESCO1Q5FWF5 840 aa17.04■□□□□ 0.32
ATP2C1-214ENST00000508532 BICC1Q9H694 974 aaKnown RBP17.04■□□□□ 0.32
ATP2C1-214ENST00000508532 TPM1P09493 284 aa17.04■□□□□ 0.32
ATP2C1-214ENST00000508532 PIP4K2AP48426 406 aaPredicted RBP17.04■□□□□ 0.32
ATP2C1-214ENST00000508532 LRRC8AQ8IWT6 810 aa17.04■□□□□ 0.32
ATP2C1-214ENST00000508532 CCDC85AQ96PX6 553 aaPredicted RBP17.04■□□□□ 0.32
ATP2C1-214ENST00000508532 ATP5J2-PTCD1G3V325 749 aa17.04■□□□□ 0.32
ATP2C1-214ENST00000508532 PTCD1O75127 700 aaKnown RBP17.04■□□□□ 0.32
ATP2C1-214ENST00000508532 ERCC6LQ2NKX8 1250 aa17.04■□□□□ 0.32
ATP2C1-214ENST00000508532 UBE3BQ7Z3V4 1068 aa17.04■□□□□ 0.32
ATP2C1-214ENST00000508532 MAP3K5Q99683 1374 aa17.03■□□□□ 0.32
ATP2C1-214ENST00000508532 ABCC3O15438 1527 aa17.03■□□□□ 0.32
ATP2C1-214ENST00000508532 CBFA2T2O43439 604 aa17.03■□□□□ 0.32
ATP2C1-214ENST00000508532 KCNQ3O43525 872 aa17.03■□□□□ 0.32
ATP2C1-214ENST00000508532 KSR2Q6VAB6 950 aa17.03■□□□□ 0.32
ATP2C1-214ENST00000508532 CPSF1Q10570 1443 aaKnown RBP17.03■□□□□ 0.32
ATP2C1-214ENST00000508532 GNG11P61952 73 aa17.02■□□□□ 0.32
ATP2C1-214ENST00000508532 OTUD7BQ6GQQ9 843 aa17.02■□□□□ 0.32
ATP2C1-214ENST00000508532 CCDC150Q8NCX0 1101 aa17.02■□□□□ 0.32
ATP2C1-214ENST00000508532 AK7Q96M32 723 aa17.02■□□□□ 0.32
ATP2C1-214ENST00000508532 MARCKSP29966 332 aaPredicted RBP17.02■□□□□ 0.32
ATP2C1-214ENST00000508532 JMYQ8N9B5 988 aa17.02■□□□□ 0.32
ATP2C1-214ENST00000508532 RASSF8Q8NHQ8 419 aa17.02■□□□□ 0.32
ATP2C1-214ENST00000508532 EAF2Q96CJ1 260 aaPredicted RBP17.02■□□□□ 0.32
ATP2C1-214ENST00000508532 FTOQ9C0B1 505 aaKnown RBP eCLIP17.02■□□□□ 0.32
ATP2C1-214ENST00000508532 CWC15Q9P013 229 aaKnown RBP17.02■□□□□ 0.32
ATP2C1-214ENST00000508532 KIAA1210Q9ULL0 1709 aa17.02■□□□□ 0.32
ATP2C1-214ENST00000508532 ORC3Q9UBD5 711 aaPredicted RBP17.02■□□□□ 0.32
ATP2C1-214ENST00000508532 SNRKQ9NRH2 765 aa17.02■□□□□ 0.31
ATP2C1-214ENST00000508532 HMGB1P09429 215 aaKnown RBP17.01■□□□□ 0.31
ATP2C1-214ENST00000508532 AP5Z1O43299 807 aa17.01■□□□□ 0.31
ATP2C1-214ENST00000508532 UBASH3AP57075 661 aa17.01■□□□□ 0.31
ATP2C1-214ENST00000508532 SAFBQ15424 915 aaKnown RBP eCLIP17.01■□□□□ 0.31
ATP2C1-214ENST00000508532 C11orf57Q6ZUT1 292 aaPredicted RBP17.01■□□□□ 0.31
ATP2C1-214ENST00000508532 GOLGA8BA8MQT2 603 aa17.01■□□□□ 0.31
ATP2C1-214ENST00000508532 CDK12Q9NYV4 1490 aaPredicted RBP17.01■□□□□ 0.31
ATP2C1-214ENST00000508532 FAM160A1Q05DH4 1040 aa17.01■□□□□ 0.31
ATP2C1-214ENST00000508532 LEKR1Q6ZMV7 388 aa17.01■□□□□ 0.31
ATP2C1-214ENST00000508532 TDRD7Q8NHU6 1098 aaKnown RBP17.01■□□□□ 0.31
ATP2C1-214ENST00000508532 ALDH1L1O75891 902 aa17■□□□□ 0.31
ATP2C1-214ENST00000508532 LRRC59Q96AG4 307 aaKnown RBP17■□□□□ 0.31
ATP2C1-214ENST00000508532 ZSCAN12O43309 604 aa17■□□□□ 0.31
ATP2C1-214ENST00000508532 CASQ1P31415 396 aa17■□□□□ 0.31
ATP2C1-214ENST00000508532 MCMDC2Q4G0Z9 681 aa17■□□□□ 0.31
ATP2C1-214ENST00000508532 CPLX3Q8WVH0 158 aa17■□□□□ 0.31
ATP2C1-214ENST00000508532 A0A087WZG4 1122 aa17■□□□□ 0.31
ATP2C1-214ENST00000508532 SLC39A6Q13433 755 aa17■□□□□ 0.31
ATP2C1-214ENST00000508532 CCDC144BQ3MJ40 725 aa17■□□□□ 0.31
ATP2C1-214ENST00000508532 CCDC144CPQ8IYA2 1237 aa17■□□□□ 0.31
ATP2C1-214ENST00000508532 DHX8Q14562 1220 aaKnown RBP16.99■□□□□ 0.31
ATP2C1-214ENST00000508532 LINS1Q8NG48 757 aa16.99■□□□□ 0.31
ATP2C1-214ENST00000508532 ADGRB1O14514 1584 aa16.99■□□□□ 0.31
ATP2C1-214ENST00000508532 ADGRB2O60241 1585 aa16.99■□□□□ 0.31
ATP2C1-214ENST00000508532 HOXC9P31274 260 aa16.99■□□□□ 0.31
ATP2C1-214ENST00000508532 COL3A1P02461 1466 aaPredicted RBP16.99■□□□□ 0.31
ATP2C1-214ENST00000508532 IFIT1P09914 478 aaKnown RBP16.99■□□□□ 0.31
ATP2C1-214ENST00000508532 BEND3Q5T5X7 828 aa16.99■□□□□ 0.31
ATP2C1-214ENST00000508532 USP28Q96RU2 1077 aa16.99■□□□□ 0.31
ATP2C1-214ENST00000508532 UTP14AQ9BVJ6 771 aaKnown RBP16.99■□□□□ 0.31
ATP2C1-214ENST00000508532 PRR36Q9H6K5 1346 aa16.99■□□□□ 0.31
ATP2C1-214ENST00000508532 SUCLG2Q96I99 432 aa16.99■□□□□ 0.31
ATP2C1-214ENST00000508532 SEC62Q99442 399 aaKnown RBP16.99■□□□□ 0.31
ATP2C1-214ENST00000508532 LMAN1P49257 510 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms