RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 SGIP1Q9BQI5 828 aa10.88□□□□□ -0.67
USP46-207ENST00000508499 ZBTB40Q9NUA8 1239 aa10.88□□□□□ -0.67
USP46-207ENST00000508499 SH3TC1Q8TE82 1336 aa10.87□□□□□ -0.67
USP46-207ENST00000508499 KIAA1551Q9HCM1 1747 aa10.87□□□□□ -0.67
USP46-207ENST00000508499 KLRG2A4D1S0 409 aaPredicted RBP10.87□□□□□ -0.67
USP46-207ENST00000508499 ATP5J2-PTCD1G3V325 749 aa10.87□□□□□ -0.67
USP46-207ENST00000508499 MTX1Q13505 466 aa10.87□□□□□ -0.67
USP46-207ENST00000508499 R3HDM1Q15032 1099 aaKnown RBP10.87□□□□□ -0.67
USP46-207ENST00000508499 SUSD4Q5VX71 490 aa10.87□□□□□ -0.67
USP46-207ENST00000508499 ITPRIPQ8IWB1 547 aa10.87□□□□□ -0.67
USP46-207ENST00000508499 MS4A3Q96HJ5 214 aa10.87□□□□□ -0.67
USP46-207ENST00000508499 UTP14AQ9BVJ6 771 aaKnown RBP10.87□□□□□ -0.67
USP46-207ENST00000508499 COG6Q9Y2V7 657 aa10.87□□□□□ -0.67
USP46-207ENST00000508499 TNRC6CQ9HCJ0 1690 aaKnown RBP10.87□□□□□ -0.67
USP46-207ENST00000508499 RTL9Q8NET4 1388 aa10.87□□□□□ -0.67
USP46-207ENST00000508499 LRP5O75197 1615 aa10.87□□□□□ -0.67
USP46-207ENST00000508499 BRCA1P38398 1863 aaKnown RBP10.87□□□□□ -0.67
USP46-207ENST00000508499 DDR1Q08345 913 aa10.86□□□□□ -0.67
USP46-207ENST00000508499 RABL6Q3YEC7 729 aaPredicted RBP10.86□□□□□ -0.67
USP46-207ENST00000508499 PDGFDQ9GZP0 370 aaPredicted RBP10.86□□□□□ -0.67
USP46-207ENST00000508499 SCUBE2Q9NQ36 999 aa10.86□□□□□ -0.67
USP46-207ENST00000508499 C9orf78Q9NZ63 289 aaPredicted RBP10.86□□□□□ -0.67
USP46-207ENST00000508499 FBXO3Q9UK99 471 aa10.86□□□□□ -0.67
USP46-207ENST00000508499 C10orf71Q711Q0 1435 aa10.86□□□□□ -0.67
USP46-207ENST00000508499 SERPINB2P05120 415 aa10.85□□□□□ -0.67
USP46-207ENST00000508499 NBPF7P0C2Y1 421 aaPredicted RBP10.85□□□□□ -0.67
USP46-207ENST00000508499 GPTP24298 496 aa10.85□□□□□ -0.67
USP46-207ENST00000508499 MNX1P50219 401 aaPredicted RBP10.85□□□□□ -0.67
USP46-207ENST00000508499 NBPF5PQ86XG9 351 aaPredicted RBP10.85□□□□□ -0.67
USP46-207ENST00000508499 MEIS3Q99687 375 aa10.85□□□□□ -0.67
USP46-207ENST00000508499 TRMT112Q9UI30 125 aaKnown RBP10.85□□□□□ -0.67
USP46-207ENST00000508499 PDZRN3Q9UPQ7 1066 aa10.85□□□□□ -0.67
USP46-207ENST00000508499 GNAI2P04899 355 aa10.84□□□□□ -0.67
USP46-207ENST00000508499 CSF1RP07333 972 aa10.84□□□□□ -0.67
USP46-207ENST00000508499 MMP10P09238 476 aa10.84□□□□□ -0.67
USP46-207ENST00000508499 UBTFL1P0CB47 393 aaPredicted RBP10.84□□□□□ -0.67
USP46-207ENST00000508499 PRR5LQ6MZQ0 368 aa10.84□□□□□ -0.67
USP46-207ENST00000508499 UBE3BQ7Z3V4 1068 aa10.84□□□□□ -0.67
USP46-207ENST00000508499 CNBD1Q8NA66 436 aa10.84□□□□□ -0.67
USP46-207ENST00000508499 KAZALD1Q96I82 304 aa10.84□□□□□ -0.67
USP46-207ENST00000508499 PARP3Q9Y6F1 533 aa10.84□□□□□ -0.67
USP46-207ENST00000508499 COL11A2P13942 1736 aaPredicted RBP10.84□□□□□ -0.67
USP46-207ENST00000508499 PDE8AO60658 829 aa10.84□□□□□ -0.67
USP46-207ENST00000508499 PTGER2P43116 358 aa10.84□□□□□ -0.67
USP46-207ENST00000508499 SF3B3Q15393 1217 aaKnown RBP10.84□□□□□ -0.67
USP46-207ENST00000508499 CRY2Q49AN0 593 aa10.84□□□□□ -0.67
USP46-207ENST00000508499 RPAP2Q8IXW5 612 aaPredicted RBP10.84□□□□□ -0.67
USP46-207ENST00000508499 CRBNQ96SW2 442 aa10.84□□□□□ -0.67
USP46-207ENST00000508499 BRIP1Q9BX63 1249 aa10.84□□□□□ -0.67
USP46-207ENST00000508499 DAXXQ9UER7 740 aaPredicted RBP10.84□□□□□ -0.67
USP46-207ENST00000508499 IRS4O14654 1257 aaPredicted RBP10.83□□□□□ -0.68
USP46-207ENST00000508499 NEFLP07196 543 aa10.83□□□□□ -0.68
USP46-207ENST00000508499 ST5P78524 1137 aa10.83□□□□□ -0.68
USP46-207ENST00000508499 FOXO4P98177 505 aa10.83□□□□□ -0.68
USP46-207ENST00000508499 FAM89AQ96GI7 184 aa10.83□□□□□ -0.68
USP46-207ENST00000508499 FAM163AQ96GL9 167 aaPredicted RBP10.83□□□□□ -0.68
USP46-207ENST00000508499 LRRC37AA6NMS7 1700 aa10.83□□□□□ -0.68
USP46-207ENST00000508499 A0A1B0GUL6 1792 aa10.82□□□□□ -0.68
USP46-207ENST00000508499 ABCC12Q96J65 1359 aa10.82□□□□□ -0.68
USP46-207ENST00000508499 POLD1P28340 1107 aa10.82□□□□□ -0.68
USP46-207ENST00000508499 ERFEQ4G0M1 354 aa10.82□□□□□ -0.68
USP46-207ENST00000508499 BICDL1Q6ZP65 573 aa10.82□□□□□ -0.68
USP46-207ENST00000508499 PSDA5PKW4 1024 aaPredicted RBP10.81□□□□□ -0.68
USP46-207ENST00000508499 HOXA10P31260 410 aaPredicted RBP10.81□□□□□ -0.68
USP46-207ENST00000508499 PDE6BP35913 854 aa10.81□□□□□ -0.68
USP46-207ENST00000508499 CTSWP56202 376 aa10.81□□□□□ -0.68
USP46-207ENST00000508499 ANKRD44Q8N8A2 993 aa10.81□□□□□ -0.68
USP46-207ENST00000508499 TTLL11Q8NHH1 800 aa10.81□□□□□ -0.68
USP46-207ENST00000508499 EXOC6Q8TAG9 804 aa10.81□□□□□ -0.68
USP46-207ENST00000508499 SSH3Q8TE77 659 aa10.81□□□□□ -0.68
USP46-207ENST00000508499 SUCLG2Q96I99 432 aa10.81□□□□□ -0.68
USP46-207ENST00000508499 NLRP3Q96P20 1036 aa10.81□□□□□ -0.68
USP46-207ENST00000508499 BICC1Q9H694 974 aaKnown RBP10.81□□□□□ -0.68
USP46-207ENST00000508499 SPON1Q9HCB6 807 aa10.81□□□□□ -0.68
USP46-207ENST00000508499 ARFGEF1Q9Y6D6 1849 aa10.8□□□□□ -0.68
USP46-207ENST00000508499 ZBTB7AO95365 584 aa10.8□□□□□ -0.68
USP46-207ENST00000508499 GTF2E1P29083 439 aaPredicted RBP10.8□□□□□ -0.68
USP46-207ENST00000508499 ATP8B2P98198 1209 aa10.8□□□□□ -0.68
USP46-207ENST00000508499 MSL1Q68DK7 614 aa10.8□□□□□ -0.68
USP46-207ENST00000508499 CEP85Q6P2H3 762 aa10.8□□□□□ -0.68
USP46-207ENST00000508499 NUTM1Q86Y26 1132 aa10.8□□□□□ -0.68
USP46-207ENST00000508499 CD2APQ9Y5K6 639 aa10.8□□□□□ -0.68
USP46-207ENST00000508499 LRRFIP2Q9Y608 721 aaKnown RBP10.8□□□□□ -0.68
USP46-207ENST00000508499 SPEF2Q9C093 1822 aa10.8□□□□□ -0.68
USP46-207ENST00000508499 TAF1P21675 1872 aa10.79□□□□□ -0.68
USP46-207ENST00000508499 TGFB2P61812 414 aa10.79□□□□□ -0.68
USP46-207ENST00000508499 HDAC1Q13547 482 aaPredicted RBP10.79□□□□□ -0.68
USP46-207ENST00000508499 CCDC152Q4G0S7 254 aa10.79□□□□□ -0.68
USP46-207ENST00000508499 EPHA10Q5JZY3 1008 aa10.79□□□□□ -0.68
USP46-207ENST00000508499 SYNE4Q8N205 404 aa10.79□□□□□ -0.68
USP46-207ENST00000508499 CACNA1SQ13698 1873 aa10.79□□□□□ -0.68
USP46-207ENST00000508499 LTBP1Q14766 1721 aa10.79□□□□□ -0.68
USP46-207ENST00000508499 SRGNP10124 158 aa10.78□□□□□ -0.68
USP46-207ENST00000508499 CRAMP1Q96RY5 1269 aa10.78□□□□□ -0.68
USP46-207ENST00000508499 COPRSQ9NQ92 184 aa10.78□□□□□ -0.68
USP46-207ENST00000508499 HMMRO75330 724 aa10.77□□□□□ -0.68
USP46-207ENST00000508499 HCLS1P14317 486 aaPredicted RBP10.77□□□□□ -0.68
USP46-207ENST00000508499 RFX5P48382 616 aaPredicted RBP10.77□□□□□ -0.68
USP46-207ENST00000508499 STYK1Q6J9G0 422 aa10.77□□□□□ -0.68
USP46-207ENST00000508499 LMBR1LQ6UX01 489 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms