RNA–Protein interactions for RNA: ENST00000508278.6

MRPL48-206, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 2

Gene MRPL48, Length 1,560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-206ENST00000508278 SH3TC1Q8TE82 1336 aa13.96□□□□□ -0.17
MRPL48-206ENST00000508278 NUP98P52948 1817 aa13.96□□□□□ -0.17
MRPL48-206ENST00000508278 HOXA10P31260 410 aaPredicted RBP13.96□□□□□ -0.18
MRPL48-206ENST00000508278 RPGRQ92834 1020 aaKnown RBP13.96□□□□□ -0.18
MRPL48-206ENST00000508278 FAM89AQ96GI7 184 aa13.96□□□□□ -0.18
MRPL48-206ENST00000508278 NLRP3Q96P20 1036 aa13.96□□□□□ -0.18
MRPL48-206ENST00000508278 MAP3K2Q9Y2U5 619 aa13.96□□□□□ -0.18
MRPL48-206ENST00000508278 COL11A2P13942 1736 aaPredicted RBP13.95□□□□□ -0.18
MRPL48-206ENST00000508278 CHD4Q14839 1912 aa13.95□□□□□ -0.18
MRPL48-206ENST00000508278 PI4KAP2A4QPH2 592 aa13.95□□□□□ -0.18
MRPL48-206ENST00000508278 DDX58O95786 925 aaKnown RBP13.95□□□□□ -0.18
MRPL48-206ENST00000508278 ALDH1B1P30837 517 aa13.95□□□□□ -0.18
MRPL48-206ENST00000508278 MVPQ14764 893 aaKnown RBP13.95□□□□□ -0.18
MRPL48-206ENST00000508278 KSR2Q6VAB6 950 aa13.95□□□□□ -0.18
MRPL48-206ENST00000508278 SLC51AQ86UW1 340 aa13.95□□□□□ -0.18
MRPL48-206ENST00000508278 PI4KAP1Q8N8J0 262 aa13.95□□□□□ -0.18
MRPL48-206ENST00000508278 METTL22Q9BUU2 404 aaPredicted RBP13.95□□□□□ -0.18
MRPL48-206ENST00000508278 RIC1Q4ADV7 1423 aa13.94□□□□□ -0.18
MRPL48-206ENST00000508278 TBC1D32Q96NH3 1257 aa13.94□□□□□ -0.18
MRPL48-206ENST00000508278 TNRC6CQ9HCJ0 1690 aaKnown RBP13.93□□□□□ -0.18
MRPL48-206ENST00000508278 LMNB1P20700 586 aa13.93□□□□□ -0.18
MRPL48-206ENST00000508278 FLIIQ13045 1269 aa13.93□□□□□ -0.18
MRPL48-206ENST00000508278 IL27Q8NEV9 243 aa13.93□□□□□ -0.18
MRPL48-206ENST00000508278 JARID2Q92833 1246 aaPredicted RBP13.93□□□□□ -0.18
MRPL48-206ENST00000508278 RBM17Q96I25 401 aaKnown RBP13.93□□□□□ -0.18
MRPL48-206ENST00000508278 CRAMP1Q96RY5 1269 aa13.93□□□□□ -0.18
MRPL48-206ENST00000508278 DLEC1Q9Y238 1755 aa13.93□□□□□ -0.18
MRPL48-206ENST00000508278 ARFGEF1Q9Y6D6 1849 aa13.92□□□□□ -0.18
MRPL48-206ENST00000508278 FRAT2O75474 233 aaPredicted RBP13.92□□□□□ -0.18
MRPL48-206ENST00000508278 IGKV5-2P06315 115 aa13.92□□□□□ -0.18
MRPL48-206ENST00000508278 HDAC1Q13547 482 aaPredicted RBP13.92□□□□□ -0.18
MRPL48-206ENST00000508278 L1TD1Q5T7N2 865 aaKnown RBP13.92□□□□□ -0.18
MRPL48-206ENST00000508278 GPBP1L1Q9HC44 474 aaPredicted RBP13.92□□□□□ -0.18
MRPL48-206ENST00000508278 CCDC93Q567U6 631 aa13.92□□□□□ -0.18
MRPL48-206ENST00000508278 SOGA3Q5TF21 947 aa13.92□□□□□ -0.18
MRPL48-206ENST00000508278 DZIP1LQ8IYY4 767 aaKnown RBP13.92□□□□□ -0.18
MRPL48-206ENST00000508278 ZBTB38Q8NAP3 1195 aaPredicted RBP13.92□□□□□ -0.18
MRPL48-206ENST00000508278 CCDC191Q8NCU4 936 aa13.92□□□□□ -0.18
MRPL48-206ENST00000508278 TAOK3Q9H2K8 898 aa13.92□□□□□ -0.18
MRPL48-206ENST00000508278 DDX19BQ9UMR2 479 aa13.92□□□□□ -0.18
MRPL48-206ENST00000508278 PCDHB15Q9Y5E8 787 aa13.92□□□□□ -0.18
MRPL48-206ENST00000508278 SLX4Q8IY92 1834 aa13.91□□□□□ -0.18
MRPL48-206ENST00000508278 IRS4O14654 1257 aaPredicted RBP13.91□□□□□ -0.18
MRPL48-206ENST00000508278 FKBP5Q13451 457 aaPredicted RBP13.91□□□□□ -0.18
MRPL48-206ENST00000508278 CWF19L2Q2TBE0 894 aaKnown RBP13.91□□□□□ -0.18
MRPL48-206ENST00000508278 FTSJ3Q8IY81 847 aaKnown RBP13.91□□□□□ -0.18
MRPL48-206ENST00000508278 CHMP4BQ9H444 224 aaKnown RBP13.91□□□□□ -0.18
MRPL48-206ENST00000508278 CWC25Q9NXE8 425 aaPredicted RBP13.91□□□□□ -0.18
MRPL48-206ENST00000508278 ABCC4O15439 1325 aa13.9□□□□□ -0.18
MRPL48-206ENST00000508278 LTBP3Q9NS15 1303 aa13.9□□□□□ -0.18
MRPL48-206ENST00000508278 PPEF1O14829 653 aaPredicted RBP13.89□□□□□ -0.19
MRPL48-206ENST00000508278 IPO8O15397 1037 aaKnown RBP13.89□□□□□ -0.19
MRPL48-206ENST00000508278 PCCAP05165 728 aaPredicted RBP13.89□□□□□ -0.19
MRPL48-206ENST00000508278 FKBP4Q02790 459 aaKnown RBP eCLIP13.89□□□□□ -0.19
MRPL48-206ENST00000508278 SF3B3Q15393 1217 aaKnown RBP13.89□□□□□ -0.19
MRPL48-206ENST00000508278 RTKN2Q8IZC4 609 aa13.89□□□□□ -0.19
MRPL48-206ENST00000508278 ZNF277Q9NRM2 450 aaPredicted RBP13.89□□□□□ -0.19
MRPL48-206ENST00000508278 NEURL1BA8MQ27 555 aa13.88□□□□□ -0.19
MRPL48-206ENST00000508278 F6X3S4 739 aa13.88□□□□□ -0.19
MRPL48-206ENST00000508278 NEXNQ0ZGT2 675 aa13.88□□□□□ -0.19
MRPL48-206ENST00000508278 DDX46Q7L014 1031 aaKnown RBP13.88□□□□□ -0.19
MRPL48-206ENST00000508278 DNAAF4Q8WXU2 420 aa13.88□□□□□ -0.19
MRPL48-206ENST00000508278 NMRK2Q9NPI5 230 aa13.88□□□□□ -0.19
MRPL48-206ENST00000508278 KIF16BQ96L93 1317 aa13.88□□□□□ -0.19
MRPL48-206ENST00000508278 SNED1Q8TER0 1413 aa13.88□□□□□ -0.19
MRPL48-206ENST00000508278 KIF3CO14782 793 aa13.88□□□□□ -0.19
MRPL48-206ENST00000508278 EIF5BO60841 1220 aaKnown RBP13.88□□□□□ -0.19
MRPL48-206ENST00000508278 BBOX1O75936 387 aa13.88□□□□□ -0.19
MRPL48-206ENST00000508278 RLBP1P12271 317 aa13.88□□□□□ -0.19
MRPL48-206ENST00000508278 FAM43AQ8N2R8 423 aa13.88□□□□□ -0.19
MRPL48-206ENST00000508278 ANTXR1Q9H6X2 564 aa13.88□□□□□ -0.19
MRPL48-206ENST00000508278 ATP6V0A2Q9Y487 856 aa13.88□□□□□ -0.19
MRPL48-206ENST00000508278 GRAPQ13588 217 aa13.87□□□□□ -0.19
MRPL48-206ENST00000508278 CC2D2BQ6DHV5 1058 aa13.87□□□□□ -0.19
MRPL48-206ENST00000508278 GRAPLQ8TC17 118 aaPredicted RBP13.87□□□□□ -0.19
MRPL48-206ENST00000508278 CELF1Q92879 486 aaKnown RBP13.87□□□□□ -0.19
MRPL48-206ENST00000508278 SEC24BO95487 1268 aa13.86□□□□□ -0.19
MRPL48-206ENST00000508278 GCKRQ14397 625 aa13.86□□□□□ -0.19
MRPL48-206ENST00000508278 ALDH1L2Q3SY69 923 aa13.86□□□□□ -0.19
MRPL48-206ENST00000508278 MRPL50Q8N5N7 158 aaKnown RBP13.86□□□□□ -0.19
MRPL48-206ENST00000508278 CCDC85AQ96PX6 553 aaPredicted RBP13.86□□□□□ -0.19
MRPL48-206ENST00000508278 PSMD1Q99460 953 aa13.86□□□□□ -0.19
MRPL48-206ENST00000508278 SMC4Q9NTJ3 1288 aa13.86□□□□□ -0.19
MRPL48-206ENST00000508278 ZC3H4Q9UPT8 1303 aaKnown RBP13.86□□□□□ -0.19
MRPL48-206ENST00000508278 ANKRD36CQ5JPF3 1778 aa13.86□□□□□ -0.19
MRPL48-206ENST00000508278 ARFGEF2Q9Y6D5 1785 aa13.86□□□□□ -0.19
MRPL48-206ENST00000508278 GLTPD2A6NH11 291 aa13.85□□□□□ -0.19
MRPL48-206ENST00000508278 H7C1W4 665 aa13.85□□□□□ -0.19
MRPL48-206ENST00000508278 PDE8AO60658 829 aa13.85□□□□□ -0.19
MRPL48-206ENST00000508278 BRPF1P55201 1214 aaPredicted RBP13.85□□□□□ -0.19
MRPL48-206ENST00000508278 C1QTNF8P60827 252 aa13.85□□□□□ -0.19
MRPL48-206ENST00000508278 ATF7IPQ6VMQ6 1270 aa13.85□□□□□ -0.19
MRPL48-206ENST00000508278 SP8Q8IXZ3 490 aa13.85□□□□□ -0.19
MRPL48-206ENST00000508278 LINS1Q8NG48 757 aa13.85□□□□□ -0.19
MRPL48-206ENST00000508278 SSH1Q8WYL5 1049 aa13.85□□□□□ -0.19
MRPL48-206ENST00000508278 SEC31BQ9NQW1 1179 aa13.85□□□□□ -0.19
MRPL48-206ENST00000508278 CACNA1FO60840 1977 aa13.84□□□□□ -0.19
MRPL48-206ENST00000508278 IARSP41252 1262 aaKnown RBP13.84□□□□□ -0.19
MRPL48-206ENST00000508278 BEND3Q5T5X7 828 aa13.84□□□□□ -0.19
MRPL48-206ENST00000508278 UBE3BQ7Z3V4 1068 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms