RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 C7orf43Q8WVR3 580 aa12.03□□□□□ -0.48
RPS3A-206ENST00000507485 KDM3BQ7LBC6 1761 aa12.03□□□□□ -0.48
RPS3A-206ENST00000507485 LTBP3Q9NS15 1303 aa12.03□□□□□ -0.48
RPS3A-206ENST00000507485 LAMB4A4D0S4 1761 aa12.02□□□□□ -0.48
RPS3A-206ENST00000507485 SNRPA1P09661 255 aaKnown RBP12.02□□□□□ -0.48
RPS3A-206ENST00000507485 HLFQ16534 295 aa12.02□□□□□ -0.48
RPS3A-206ENST00000507485 COL13A1Q5TAT6 717 aaPredicted RBP12.02□□□□□ -0.48
RPS3A-206ENST00000507485 STYK1Q6J9G0 422 aa12.02□□□□□ -0.48
RPS3A-206ENST00000507485 DDNO94850 711 aaPredicted RBP12.01□□□□□ -0.49
RPS3A-206ENST00000507485 ERFEQ4G0M1 354 aa12.01□□□□□ -0.49
RPS3A-206ENST00000507485 SLC51AQ86UW1 340 aa12.01□□□□□ -0.49
RPS3A-206ENST00000507485 KCTD12Q96CX2 325 aaKnown RBP12.01□□□□□ -0.49
RPS3A-206ENST00000507485 GPHNQ9NQX3 736 aaPredicted RBP12.01□□□□□ -0.49
RPS3A-206ENST00000507485 NUDCQ9Y266 331 aa12.01□□□□□ -0.49
RPS3A-206ENST00000507485 KLRG2A4D1S0 409 aaPredicted RBP12.01□□□□□ -0.49
RPS3A-206ENST00000507485 ST5P78524 1137 aa12.01□□□□□ -0.49
RPS3A-206ENST00000507485 CLEC4GQ6UXB4 293 aa12.01□□□□□ -0.49
RPS3A-206ENST00000507485 MASTLQ96GX5 879 aa12.01□□□□□ -0.49
RPS3A-206ENST00000507485 TAOK3Q9H2K8 898 aa12.01□□□□□ -0.49
RPS3A-206ENST00000507485 PDZRN3Q9UPQ7 1066 aa12.01□□□□□ -0.49
RPS3A-206ENST00000507485 FAM177BA6PVY3 158 aa12□□□□□ -0.49
RPS3A-206ENST00000507485 NBPF5PQ86XG9 351 aaPredicted RBP12□□□□□ -0.49
RPS3A-206ENST00000507485 RTF1Q92541 710 aaKnown RBP12□□□□□ -0.49
RPS3A-206ENST00000507485 CNKSR1Q969H4 720 aa12□□□□□ -0.49
RPS3A-206ENST00000507485 PLEKHF1Q96S99 279 aa12□□□□□ -0.49
RPS3A-206ENST00000507485 THUMPD2Q9BTF0 503 aaKnown RBP12□□□□□ -0.49
RPS3A-206ENST00000507485 ABCC12Q96J65 1359 aa11.99□□□□□ -0.49
RPS3A-206ENST00000507485 SNED1Q8TER0 1413 aa11.99□□□□□ -0.49
RPS3A-206ENST00000507485 HTATSF1O43719 755 aaKnown RBP11.99□□□□□ -0.49
RPS3A-206ENST00000507485 TAF7Q15545 349 aaPredicted RBP11.99□□□□□ -0.49
RPS3A-206ENST00000507485 NIP7Q9Y221 180 aaKnown RBP eCLIP11.99□□□□□ -0.493e-23■□□□□ 10.2
RPS3A-206ENST00000507485 COL4A5P29400 1685 aa11.98□□□□□ -0.49
RPS3A-206ENST00000507485 NPHP1O15259 732 aa11.98□□□□□ -0.49
RPS3A-206ENST00000507485 RGS20O76081 388 aa11.98□□□□□ -0.49
RPS3A-206ENST00000507485 NUP98P52948 1817 aa11.98□□□□□ -0.49
RPS3A-206ENST00000507485 ZNF541Q9H0D2 1346 aa11.98□□□□□ -0.49
RPS3A-206ENST00000507485 PCNTO95613 3336 aa11.97□□□□□ -0.49
RPS3A-206ENST00000507485 NPR1P16066 1061 aa11.97□□□□□ -0.49
RPS3A-206ENST00000507485 TTLL7Q6ZT98 887 aa11.97□□□□□ -0.49
RPS3A-206ENST00000507485 NPM2Q86SE8 214 aaKnown RBP11.97□□□□□ -0.49
RPS3A-206ENST00000507485 ZNF277Q9NRM2 450 aaPredicted RBP11.97□□□□□ -0.49
RPS3A-206ENST00000507485 EIF4A1P60842 406 aaKnown RBP11.96□□□□□ -0.49
RPS3A-206ENST00000507485 NUTM1Q86Y26 1132 aa11.96□□□□□ -0.49
RPS3A-206ENST00000507485 NGEFQ8N5V2 710 aa11.96□□□□□ -0.49
RPS3A-206ENST00000507485 KCNK17Q96T54 332 aa11.96□□□□□ -0.49
RPS3A-206ENST00000507485 ADAMTSL1Q8N6G6 1762 aa11.96□□□□□ -0.49
RPS3A-206ENST00000507485 DSG2Q14126 1118 aa11.96□□□□□ -0.5
RPS3A-206ENST00000507485 CCDC93Q567U6 631 aa11.96□□□□□ -0.5
RPS3A-206ENST00000507485 TPTE2Q6XPS3 522 aa11.96□□□□□ -0.5
RPS3A-206ENST00000507485 ZNF652Q9Y2D9 606 aa11.96□□□□□ -0.5
RPS3A-206ENST00000507485 UBN2Q6ZU65 1347 aa11.96□□□□□ -0.5
RPS3A-206ENST00000507485 HSPA1AP0DMV8 641 aaKnown RBP11.95□□□□□ -0.5
RPS3A-206ENST00000507485 HSPA1BP0DMV9 641 aaKnown RBP11.95□□□□□ -0.5
RPS3A-206ENST00000507485 FKBP4Q02790 459 aaKnown RBP eCLIP11.95□□□□□ -0.5
RPS3A-206ENST00000507485 SCN4AP35499 1836 aa11.94□□□□□ -0.5
RPS3A-206ENST00000507485 NFE2L2Q16236 605 aa11.94□□□□□ -0.5
RPS3A-206ENST00000507485 CRY2Q49AN0 593 aa11.94□□□□□ -0.5
RPS3A-206ENST00000507485 SOGA3Q5TF21 947 aa11.94□□□□□ -0.5
RPS3A-206ENST00000507485 MAP3K15Q6ZN16 1313 aa11.94□□□□□ -0.5
RPS3A-206ENST00000507485 LRP10Q7Z4F1 713 aa11.94□□□□□ -0.5
RPS3A-206ENST00000507485 PASKQ96RG2 1323 aa11.94□□□□□ -0.5
RPS3A-206ENST00000507485 TAF1DQ9H5J8 278 aaPredicted RBP11.94□□□□□ -0.5
RPS3A-206ENST00000507485 RRP7AQ9Y3A4 280 aaKnown RBP11.94□□□□□ -0.5
RPS3A-206ENST00000507485 LTBP1Q14766 1721 aa11.93□□□□□ -0.5
RPS3A-206ENST00000507485 MYL6BP14649 208 aa11.93□□□□□ -0.5
RPS3A-206ENST00000507485 GPTP24298 496 aa11.93□□□□□ -0.5
RPS3A-206ENST00000507485 SUSD4Q5VX71 490 aa11.93□□□□□ -0.5
RPS3A-206ENST00000507485 ZBTB3Q9H5J0 574 aa11.93□□□□□ -0.5
RPS3A-206ENST00000507485 MKRN1Q9UHC7 482 aaKnown RBP11.93□□□□□ -0.5
RPS3A-206ENST00000507485 ERVV-1B6SEH8 477 aa11.92□□□□□ -0.5
RPS3A-206ENST00000507485 ITGBL1O95965 494 aaPredicted RBP11.92□□□□□ -0.5
RPS3A-206ENST00000507485 PDIA6Q15084 440 aa11.92□□□□□ -0.5
RPS3A-206ENST00000507485 SYNE4Q8N205 404 aa11.92□□□□□ -0.5
RPS3A-206ENST00000507485 SLC4A5Q9BY07 1137 aa11.92□□□□□ -0.5
RPS3A-206ENST00000507485 FZD9O00144 591 aa11.91□□□□□ -0.5
RPS3A-206ENST00000507485 NTSR2O95665 410 aa11.91□□□□□ -0.5
RPS3A-206ENST00000507485 IARSP41252 1262 aaKnown RBP11.91□□□□□ -0.5
RPS3A-206ENST00000507485 PROSER3Q2NL68 480 aa11.91□□□□□ -0.5
RPS3A-206ENST00000507485 ZNF34Q8IZ26 560 aa11.91□□□□□ -0.5
RPS3A-206ENST00000507485 VPS9D1Q9Y2B5 631 aa11.91□□□□□ -0.5
RPS3A-206ENST00000507485 RIC1Q4ADV7 1423 aa11.91□□□□□ -0.5
RPS3A-206ENST00000507485 RNF123Q5XPI4 1314 aa11.91□□□□□ -0.5
RPS3A-206ENST00000507485 ANXA1P04083 346 aa11.91□□□□□ -0.5
RPS3A-206ENST00000507485 HS6ST3Q8IZP7 471 aa11.91□□□□□ -0.5
RPS3A-206ENST00000507485 PNISRQ8TF01 805 aaKnown RBP11.91□□□□□ -0.5
RPS3A-206ENST00000507485 GTF2E1P29083 439 aaPredicted RBP11.9□□□□□ -0.5
RPS3A-206ENST00000507485 HOXA10P31260 410 aaPredicted RBP11.9□□□□□ -0.5
RPS3A-206ENST00000507485 LDHDQ86WU2 507 aa11.9□□□□□ -0.5
RPS3A-206ENST00000507485 RTKN2Q8IZC4 609 aa11.9□□□□□ -0.5
RPS3A-206ENST00000507485 CNTNAP1P78357 1384 aa11.89□□□□□ -0.51
RPS3A-206ENST00000507485 IBTKQ9P2D0 1353 aaPredicted RBP11.89□□□□□ -0.51
RPS3A-206ENST00000507485 LAMB2P55268 1798 aa11.89□□□□□ -0.51
RPS3A-206ENST00000507485 IQCA1LA6NCM1 817 aa11.89□□□□□ -0.51
RPS3A-206ENST00000507485 ALDH1B1P30837 517 aa11.89□□□□□ -0.51
RPS3A-206ENST00000507485 FMR1Q06787 632 aaKnown RBP eCLIP11.89□□□□□ -0.51
RPS3A-206ENST00000507485 EAPPQ56P03 285 aaPredicted RBP11.89□□□□□ -0.51
RPS3A-206ENST00000507485 GIGYF2Q6Y7W6 1299 aaKnown RBP11.89□□□□□ -0.51
RPS3A-206ENST00000507485 TNS4Q8IZW8 715 aa11.89□□□□□ -0.51
RPS3A-206ENST00000507485 PSMD1Q99460 953 aa11.89□□□□□ -0.51
RPS3A-206ENST00000507485 TCERG1O14776 1098 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms