RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 KCNQ4P56696 695 aa5.94□□□□□ -1.46
LSM6-205ENST00000507449 SFSWAPQ12872 951 aaKnown RBP5.94□□□□□ -1.46
LSM6-205ENST00000507449 ORC1Q13415 861 aa5.94□□□□□ -1.46
LSM6-205ENST00000507449 C8orf34Q49A92 452 aa5.94□□□□□ -1.46
LSM6-205ENST00000507449 TRIM22Q8IYM9 498 aa5.94□□□□□ -1.46
LSM6-205ENST00000507449 CMTR1Q8N1G2 835 aaKnown RBP5.94□□□□□ -1.46
LSM6-205ENST00000507449 ZNF837Q96EG3 531 aaPredicted RBP5.94□□□□□ -1.46
LSM6-205ENST00000507449 NIF3L1Q9GZT8 377 aa5.94□□□□□ -1.46
LSM6-205ENST00000507449 NUCKS1Q9H1E3 243 aaKnown RBP5.94□□□□□ -1.46
LSM6-205ENST00000507449 BRD7Q9NPI1 651 aa5.94□□□□□ -1.46
LSM6-205ENST00000507449 KIAA1522Q9P206 1035 aaPredicted RBP5.94□□□□□ -1.46
LSM6-205ENST00000507449 GJA3Q9Y6H8 435 aa5.94□□□□□ -1.46
LSM6-205ENST00000507449 DCDC2BA2VCK2 349 aa5.93□□□□□ -1.46
LSM6-205ENST00000507449 ATXN7O15265 892 aaPredicted RBP5.93□□□□□ -1.46
LSM6-205ENST00000507449 BNIP3LO60238 219 aa5.93□□□□□ -1.46
LSM6-205ENST00000507449 PROCP04070 461 aa5.93□□□□□ -1.46
LSM6-205ENST00000507449 PLCB3Q01970 1234 aa5.93□□□□□ -1.46
LSM6-205ENST00000507449 TNP2Q05952 138 aa5.93□□□□□ -1.46
LSM6-205ENST00000507449 EFHC2Q5JST6 749 aa5.93□□□□□ -1.46
LSM6-205ENST00000507449 CFHR5Q9BXR6 569 aa5.93□□□□□ -1.46
LSM6-205ENST00000507449 RNF19AQ9NV58 838 aa5.93□□□□□ -1.46
LSM6-205ENST00000507449 FAM13BQ9NYF5 915 aa5.93□□□□□ -1.46
LSM6-205ENST00000507449 WWC3Q9ULE0 1092 aa5.93□□□□□ -1.46
LSM6-205ENST00000507449 PCDHGC4Q9Y5F7 938 aa5.93□□□□□ -1.46
LSM6-205ENST00000507449 UBAP1LF5GYI3 381 aa5.92□□□□□ -1.46
LSM6-205ENST00000507449 EGFRP00533 1210 aa5.92□□□□□ -1.46
LSM6-205ENST00000507449 MAPTP10636 758 aaKnown RBP5.92□□□□□ -1.46
LSM6-205ENST00000507449 PCSK2P16519 638 aa5.92□□□□□ -1.46
LSM6-205ENST00000507449 MAPK8P45983 427 aa5.92□□□□□ -1.46
LSM6-205ENST00000507449 ENOX2Q16206 610 aaKnown RBP5.92□□□□□ -1.46
LSM6-205ENST00000507449 EAPPQ56P03 285 aaPredicted RBP5.92□□□□□ -1.46
LSM6-205ENST00000507449 XKR5Q6UX68 686 aa5.92□□□□□ -1.46
LSM6-205ENST00000507449 NANOS1Q8WY41 292 aaKnown RBP5.92□□□□□ -1.46
LSM6-205ENST00000507449 TMEM63CQ9P1W3 806 aa5.92□□□□□ -1.46
LSM6-205ENST00000507449 FOXD3Q9UJU5 478 aaPredicted RBP5.92□□□□□ -1.46
LSM6-205ENST00000507449 H7C1W4 665 aa5.91□□□□□ -1.46
LSM6-205ENST00000507449 KHNYNO15037 678 aaKnown RBP5.91□□□□□ -1.46
LSM6-205ENST00000507449 XYLBO75191 536 aa5.91□□□□□ -1.46
LSM6-205ENST00000507449 TNFRSF21O75509 655 aa5.91□□□□□ -1.46
LSM6-205ENST00000507449 FIGNL1Q6PIW4 674 aa5.91□□□□□ -1.46
LSM6-205ENST00000507449 GPR161Q8N6U8 529 aaKnown RBP5.91□□□□□ -1.46
LSM6-205ENST00000507449 GTPBP3Q969Y2 492 aaKnown RBP5.91□□□□□ -1.46
LSM6-205ENST00000507449 ABHD17AQ96GS6 310 aa5.91□□□□□ -1.46
LSM6-205ENST00000507449 CHRDQ9H2X0 955 aa5.91□□□□□ -1.46
LSM6-205ENST00000507449 KCNH4Q9UQ05 1017 aa5.91□□□□□ -1.46
LSM6-205ENST00000507449 PNMA6FA0A0J9YX94 578 aa5.9□□□□□ -1.46
LSM6-205ENST00000507449 EIF1AYO14602 144 aaKnown RBP5.9□□□□□ -1.46
LSM6-205ENST00000507449 RPLP1P05386 114 aaKnown RBP5.9□□□□□ -1.46
LSM6-205ENST00000507449 LDHBP07195 334 aaKnown RBP5.9□□□□□ -1.46
LSM6-205ENST00000507449 EPB42P16452 691 aa5.9□□□□□ -1.46
LSM6-205ENST00000507449 BAG6P46379 1132 aa5.9□□□□□ -1.46
LSM6-205ENST00000507449 USPL1Q5W0Q7 1092 aa5.9□□□□□ -1.46
LSM6-205ENST00000507449 PDE12Q6L8Q7 609 aaKnown RBP5.9□□□□□ -1.46
LSM6-205ENST00000507449 MRRFQ96E11 262 aaKnown RBP5.9□□□□□ -1.46
LSM6-205ENST00000507449 CSRNP1Q96S65 589 aa5.9□□□□□ -1.46
LSM6-205ENST00000507449 KRTAP4-12Q9BQ66 201 aa5.9□□□□□ -1.46
LSM6-205ENST00000507449 GSX2Q9BZM3 304 aa5.9□□□□□ -1.46
LSM6-205ENST00000507449 ELP3Q9H9T3 547 aa5.9□□□□□ -1.46
LSM6-205ENST00000507449 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.9□□□□□ -1.46
LSM6-205ENST00000507449 GPR25O00155 361 aa5.89□□□□□ -1.47
LSM6-205ENST00000507449 SASH3O75995 380 aa5.89□□□□□ -1.47
LSM6-205ENST00000507449 CD33P20138 364 aa5.89□□□□□ -1.47
LSM6-205ENST00000507449 LAMC2Q13753 1193 aa5.89□□□□□ -1.47
LSM6-205ENST00000507449 SV2AQ7L0J3 742 aa5.89□□□□□ -1.47
LSM6-205ENST00000507449 ZNF438Q7Z4V0 828 aa5.89□□□□□ -1.47
LSM6-205ENST00000507449 WHAMMQ8TF30 809 aa5.89□□□□□ -1.47
LSM6-205ENST00000507449 GMCL1Q96IK5 515 aa5.89□□□□□ -1.47
LSM6-205ENST00000507449 SLC30A3Q99726 388 aa5.89□□□□□ -1.47
LSM6-205ENST00000507449 C11orf16Q9NQ32 467 aa5.89□□□□□ -1.47
LSM6-205ENST00000507449 CNTN3Q9P232 1028 aa5.89□□□□□ -1.47
LSM6-205ENST00000507449 ZFATQ9P243 1243 aa5.89□□□□□ -1.47
LSM6-205ENST00000507449 FNDC3AQ9Y2H6 1198 aaKnown RBP5.89□□□□□ -1.47
LSM6-205ENST00000507449 KRTAP4-8A0A0G2JLE6 195 aa5.88□□□□□ -1.47
LSM6-205ENST00000507449 PRPF40AO75400 957 aaKnown RBP5.88□□□□□ -1.47
LSM6-205ENST00000507449 TARSP26639 723 aaKnown RBP5.88□□□□□ -1.47
LSM6-205ENST00000507449 ZNF326Q5BKZ1 582 aaKnown RBP5.88□□□□□ -1.47
LSM6-205ENST00000507449 KRT25Q7Z3Z0 450 aa5.88□□□□□ -1.47
LSM6-205ENST00000507449 ALYREFQ86V81 257 aaKnown RBP5.88□□□□□ -1.47
LSM6-205ENST00000507449 NLRP13Q86W25 1043 aa5.88□□□□□ -1.47
LSM6-205ENST00000507449 VWA5B2Q8N398 1253 aa5.88□□□□□ -1.47
LSM6-205ENST00000507449 C1orf127Q8N9H9 656 aa5.88□□□□□ -1.47
LSM6-205ENST00000507449 SNX29Q8TEQ0 813 aa5.88□□□□□ -1.47
LSM6-205ENST00000507449 FAM161BQ96MY7 647 aa5.88□□□□□ -1.47
LSM6-205ENST00000507449 DUSP9Q99956 384 aaKnown RBP5.88□□□□□ -1.47
LSM6-205ENST00000507449 ZFYVE28Q9HCC9 887 aa5.88□□□□□ -1.47
LSM6-205ENST00000507449 ATXN7L1Q9ULK2 861 aaPredicted RBP5.88□□□□□ -1.47
LSM6-205ENST00000507449 EREGO14944 169 aa5.87□□□□□ -1.47
LSM6-205ENST00000507449 CYP2E1P05181 493 aaPredicted RBP5.87□□□□□ -1.47
LSM6-205ENST00000507449 CTBSQ01459 385 aa5.87□□□□□ -1.47
LSM6-205ENST00000507449 CCINQ13939 588 aa5.87□□□□□ -1.47
LSM6-205ENST00000507449 PI16Q6UXB8 463 aa5.87□□□□□ -1.47
LSM6-205ENST00000507449 RAB44Q7Z6P3 723 aaPredicted RBP5.87□□□□□ -1.47
LSM6-205ENST00000507449 TTC16Q8NEE8 873 aa5.87□□□□□ -1.47
LSM6-205ENST00000507449 DNAJC25Q9H1X3 360 aa5.87□□□□□ -1.47
LSM6-205ENST00000507449 ABI2Q9NYB9 513 aaPredicted RBP5.87□□□□□ -1.47
LSM6-205ENST00000507449 MARK1Q9P0L2 795 aa5.87□□□□□ -1.47
LSM6-205ENST00000507449 PARP2Q9UGN5 583 aa5.87□□□□□ -1.47
LSM6-205ENST00000507449 CDC14CA4D256 554 aa5.86□□□□□ -1.47
LSM6-205ENST00000507449 E9PSI1 815 aa5.86□□□□□ -1.47
LSM6-205ENST00000507449 C2CD2LO14523 706 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms