RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 USP17L3A6NCW0 530 aa6.53□□□□□ -1.36
CPNE4-207ENST00000506687 USP17L4A6NCW7 530 aa6.53□□□□□ -1.36
CPNE4-207ENST00000506687 RECKO95980 971 aa6.53□□□□□ -1.36
CPNE4-207ENST00000506687 ATP2B4P23634 1241 aa6.53□□□□□ -1.36
CPNE4-207ENST00000506687 TNNT2P45379 298 aaPredicted RBP6.53□□□□□ -1.36
CPNE4-207ENST00000506687 AMPHP49418 695 aa6.53□□□□□ -1.36
CPNE4-207ENST00000506687 MTHFSP49914 203 aa6.53□□□□□ -1.36
CPNE4-207ENST00000506687 GUCA2AQ02747 115 aa6.53□□□□□ -1.36
CPNE4-207ENST00000506687 NR6A1Q15406 480 aa6.53□□□□□ -1.36
CPNE4-207ENST00000506687 TSNAXIP1Q2TAA8 658 aa6.53□□□□□ -1.36
CPNE4-207ENST00000506687 C9orf131Q5VYM1 1079 aa6.53□□□□□ -1.36
CPNE4-207ENST00000506687 USP17L2Q6R6M4 530 aa6.53□□□□□ -1.36
CPNE4-207ENST00000506687 ARHGAP27Q6ZUM4 889 aa6.53□□□□□ -1.36
CPNE4-207ENST00000506687 USP17L1Q7RTZ2 530 aa6.53□□□□□ -1.36
CPNE4-207ENST00000506687 COL23A1Q86Y22 540 aaPredicted RBP6.53□□□□□ -1.36
CPNE4-207ENST00000506687 ANKRD24Q8TF21 1146 aa6.53□□□□□ -1.36
CPNE4-207ENST00000506687 EYA1Q99502 592 aa6.53□□□□□ -1.36
CPNE4-207ENST00000506687 CARD10Q9BWT7 1032 aa6.53□□□□□ -1.36
CPNE4-207ENST00000506687 PCDHGC3Q9UN70 934 aa6.53□□□□□ -1.36
CPNE4-207ENST00000506687 FLT4P35916 1363 aa6.53□□□□□ -1.36
CPNE4-207ENST00000506687 NCAPD2Q15021 1401 aa6.52□□□□□ -1.37
CPNE4-207ENST00000506687 USP17L15C9J2P7 530 aa6.52□□□□□ -1.37
CPNE4-207ENST00000506687 USP17L10C9JJH3 530 aa6.52□□□□□ -1.37
CPNE4-207ENST00000506687 USP17L13C9JLJ4 530 aa6.52□□□□□ -1.37
CPNE4-207ENST00000506687 USP17L12C9JPN9 530 aa6.52□□□□□ -1.37
CPNE4-207ENST00000506687 USP17L11C9JVI0 530 aa6.52□□□□□ -1.37
CPNE4-207ENST00000506687 USP17L21D6R901 530 aa6.52□□□□□ -1.37
CPNE4-207ENST00000506687 USP17L18D6R9N7 530 aa6.52□□□□□ -1.37
CPNE4-207ENST00000506687 USP17L22D6RA61 530 aa6.52□□□□□ -1.37
CPNE4-207ENST00000506687 USP17L17D6RBQ6 530 aa6.52□□□□□ -1.37
CPNE4-207ENST00000506687 USP17L19D6RCP7 530 aa6.52□□□□□ -1.37
CPNE4-207ENST00000506687 USP17L20D6RJB6 530 aa6.52□□□□□ -1.37
CPNE4-207ENST00000506687 HOXA2O43364 376 aa6.52□□□□□ -1.37
CPNE4-207ENST00000506687 HSPA8P11142 646 aaKnown RBP6.52□□□□□ -1.37
CPNE4-207ENST00000506687 SKIP12755 728 aa6.52□□□□□ -1.37
CPNE4-207ENST00000506687 PPP2R1AP30153 589 aa6.52□□□□□ -1.37
CPNE4-207ENST00000506687 IL13P35225 146 aa6.52□□□□□ -1.37
CPNE4-207ENST00000506687 USP17L24Q0WX57 530 aa6.52□□□□□ -1.37
CPNE4-207ENST00000506687 MTMR2Q13614 643 aa6.52□□□□□ -1.37
CPNE4-207ENST00000506687 CRTC2Q53ET0 693 aaPredicted RBP6.52□□□□□ -1.37
CPNE4-207ENST00000506687 NBPF6Q5VWK0 638 aa6.52□□□□□ -1.37
CPNE4-207ENST00000506687 DEPDC4Q8N2C3 294 aa6.52□□□□□ -1.37
CPNE4-207ENST00000506687 FAM200AQ8TCP9 573 aa6.52□□□□□ -1.37
CPNE4-207ENST00000506687 CLP1Q92989 425 aaKnown RBP6.52□□□□□ -1.37
CPNE4-207ENST00000506687 GCC1Q96CN9 775 aa6.52□□□□□ -1.37
CPNE4-207ENST00000506687 NBPF4Q96M43 638 aa6.52□□□□□ -1.37
CPNE4-207ENST00000506687 SBF2Q86WG5 1849 aa6.52□□□□□ -1.37
CPNE4-207ENST00000506687 KCPQ6ZWJ8 1503 aa6.51□□□□□ -1.37
CPNE4-207ENST00000506687 FAM196BA6NMK8 535 aa6.51□□□□□ -1.37
CPNE4-207ENST00000506687 CFAP99D6REC4 459 aa6.51□□□□□ -1.37
CPNE4-207ENST00000506687 C7P10643 843 aa6.51□□□□□ -1.37
CPNE4-207ENST00000506687 ERCC5P28715 1186 aaPredicted RBP6.51□□□□□ -1.37
CPNE4-207ENST00000506687 USP46P62068 366 aa6.51□□□□□ -1.37
CPNE4-207ENST00000506687 EIF4A2Q14240 407 aaKnown RBP6.51□□□□□ -1.37
CPNE4-207ENST00000506687 RALBP1Q15311 655 aa6.51□□□□□ -1.37
CPNE4-207ENST00000506687 GIMAP6Q6P9H5 292 aa6.51□□□□□ -1.37
CPNE4-207ENST00000506687 SLF2Q8IX21 1173 aa6.51□□□□□ -1.37
CPNE4-207ENST00000506687 PIP4P2Q8N4L2 257 aa6.51□□□□□ -1.37
CPNE4-207ENST00000506687 SP7Q8TDD2 431 aaPredicted RBP6.51□□□□□ -1.37
CPNE4-207ENST00000506687 HLA-CQ95604 372 aa6.51□□□□□ -1.37
CPNE4-207ENST00000506687 PRKRIP1Q9H875 184 aaPredicted RBP6.51□□□□□ -1.37
CPNE4-207ENST00000506687 FAM198AQ9UFP1 575 aa6.51□□□□□ -1.37
CPNE4-207ENST00000506687 CNTNAP1P78357 1384 aa6.51□□□□□ -1.37
CPNE4-207ENST00000506687 RGPD2P0DJD1 1756 aa6.5□□□□□ -1.37
CPNE4-207ENST00000506687 COL3A1P02461 1466 aaPredicted RBP6.5□□□□□ -1.37
CPNE4-207ENST00000506687 USP17L5A8MUK1 530 aa6.5□□□□□ -1.37
CPNE4-207ENST00000506687 DLL1O00548 723 aa6.5□□□□□ -1.37
CPNE4-207ENST00000506687 VEGFAP15692 232 aaPredicted RBP6.5□□□□□ -1.37
CPNE4-207ENST00000506687 PLCG2P16885 1265 aa6.5□□□□□ -1.37
CPNE4-207ENST00000506687 RASA1P20936 1047 aa6.5□□□□□ -1.37
CPNE4-207ENST00000506687 DNAJB2P25686 324 aa6.5□□□□□ -1.37
CPNE4-207ENST00000506687 FOSBP53539 338 aa6.5□□□□□ -1.37
CPNE4-207ENST00000506687 FBXO33Q7Z6M2 555 aa6.5□□□□□ -1.37
CPNE4-207ENST00000506687 FLAD1Q8NFF5 587 aa6.5□□□□□ -1.37
CPNE4-207ENST00000506687 ZDHHC16Q969W1 377 aa6.5□□□□□ -1.37
CPNE4-207ENST00000506687 LTV1Q96GA3 475 aaPredicted RBP6.5□□□□□ -1.37
CPNE4-207ENST00000506687 BCS1LQ9Y276 419 aa6.5□□□□□ -1.37
CPNE4-207ENST00000506687 FAM208AQ9UK61 1670 aaKnown RBP6.49□□□□□ -1.37
CPNE4-207ENST00000506687 ABL1P00519 1130 aa6.49□□□□□ -1.37
CPNE4-207ENST00000506687 HMGB2P26583 209 aaKnown RBP6.49□□□□□ -1.37
CPNE4-207ENST00000506687 ATN1P54259 1190 aaPredicted RBP6.49□□□□□ -1.37
CPNE4-207ENST00000506687 MAP2K1Q02750 393 aaPredicted RBP6.49□□□□□ -1.37
CPNE4-207ENST00000506687 NUDT18Q6ZVK8 323 aa6.49□□□□□ -1.37
CPNE4-207ENST00000506687 DPH6Q7L8W6 267 aa6.49□□□□□ -1.37
CPNE4-207ENST00000506687 NFATC2IPQ8NCF5 419 aa6.49□□□□□ -1.37
CPNE4-207ENST00000506687 NLRP2Q9NX02 1062 aa6.49□□□□□ -1.37
CPNE4-207ENST00000506687 QSER1Q2KHR3 1735 aa6.49□□□□□ -1.37
CPNE4-207ENST00000506687 C6orf229H3BNL8 230 aa6.48□□□□□ -1.37
CPNE4-207ENST00000506687 VEGFBP49765 207 aa6.48□□□□□ -1.37
CPNE4-207ENST00000506687 KCNQ4P56696 695 aa6.48□□□□□ -1.37
CPNE4-207ENST00000506687 TGFB2P61812 414 aa6.48□□□□□ -1.37
CPNE4-207ENST00000506687 NR1H3Q13133 447 aa6.48□□□□□ -1.37
CPNE4-207ENST00000506687 PTK7Q13308 1070 aa6.48□□□□□ -1.37
CPNE4-207ENST00000506687 CNGB1Q14028 1251 aaPredicted RBP6.48□□□□□ -1.37
CPNE4-207ENST00000506687 PLEKHM2Q8IWE5 1019 aa6.48□□□□□ -1.37
CPNE4-207ENST00000506687 ZNF454Q8N9F8 522 aa6.48□□□□□ -1.37
CPNE4-207ENST00000506687 BCL11AQ9H165 835 aa6.48□□□□□ -1.37
CPNE4-207ENST00000506687 TMEM134Q9H6X4 195 aa6.48□□□□□ -1.37
CPNE4-207ENST00000506687 RNF181Q9P0P0 153 aa6.48□□□□□ -1.37
CPNE4-207ENST00000506687 PCDHGA4Q9Y5G9 962 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms