RNA–Protein interactions for RNA: ENST00000506626.1

SMAD1-205, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-205ENST00000506626 IGFLR1Q9H665 355 aa6.86□□□□□ -1.31
SMAD1-205ENST00000506626 JPH1Q9HDC5 661 aaPredicted RBP6.86□□□□□ -1.31
SMAD1-205ENST00000506626 DNAJB12Q9NXW2 375 aaKnown RBP6.86□□□□□ -1.31
SMAD1-205ENST00000506626 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.86□□□□□ -1.31
SMAD1-205ENST00000506626 NFKB1P19838 968 aa6.85□□□□□ -1.31
SMAD1-205ENST00000506626 CCINQ13939 588 aa6.85□□□□□ -1.31
SMAD1-205ENST00000506626 PNMA5Q96PV4 448 aa6.85□□□□□ -1.31
SMAD1-205ENST00000506626 VRTNQ9H8Y1 702 aa6.85□□□□□ -1.31
SMAD1-205ENST00000506626 NAGPAQ9UK23 515 aa6.85□□□□□ -1.31
SMAD1-205ENST00000506626 EPB42P16452 691 aa6.84□□□□□ -1.31
SMAD1-205ENST00000506626 GRNP28799 593 aaKnown RBP6.84□□□□□ -1.31
SMAD1-205ENST00000506626 LMOD1P29536 600 aaPredicted RBP6.84□□□□□ -1.31
SMAD1-205ENST00000506626 PSAPL1Q6NUJ1 521 aa6.84□□□□□ -1.31
SMAD1-205ENST00000506626 NUDT8Q8WV74 236 aa6.84□□□□□ -1.31
SMAD1-205ENST00000506626 KRTAP4-9Q9BYQ8 210 aa6.84□□□□□ -1.31
SMAD1-205ENST00000506626 IDH3AP50213 366 aa6.83□□□□□ -1.32
SMAD1-205ENST00000506626 RAC1P63000 192 aa6.83□□□□□ -1.32
SMAD1-205ENST00000506626 FMR1NBQ8N0W7 255 aaPredicted RBP6.83□□□□□ -1.32
SMAD1-205ENST00000506626 ARXQ96QS3 562 aa6.83□□□□□ -1.32
SMAD1-205ENST00000506626 KLK14Q9P0G3 267 aa6.83□□□□□ -1.32
SMAD1-205ENST00000506626 FOXO3O43524 673 aa6.82□□□□□ -1.32
SMAD1-205ENST00000506626 WEE1P30291 646 aa6.82□□□□□ -1.32
SMAD1-205ENST00000506626 INPP5BP32019 993 aa6.82□□□□□ -1.32
SMAD1-205ENST00000506626 AFF1P51825 1210 aaKnown RBP6.82□□□□□ -1.32
SMAD1-205ENST00000506626 DGKZQ13574 1117 aa6.82□□□□□ -1.32
SMAD1-205ENST00000506626 QTRT2Q9H974 415 aaKnown RBP6.82□□□□□ -1.32
SMAD1-205ENST00000506626 USP21Q9UK80 565 aa6.82□□□□□ -1.32
SMAD1-205ENST00000506626 RGS9O75916 674 aaPredicted RBP6.81□□□□□ -1.32
SMAD1-205ENST00000506626 MAP3K6O95382 1288 aa6.81□□□□□ -1.32
SMAD1-205ENST00000506626 ARSDP51689 593 aa6.81□□□□□ -1.32
SMAD1-205ENST00000506626 MYO19Q96H55 970 aa6.81□□□□□ -1.32
SMAD1-205ENST00000506626 CD97P48960 835 aa6.8□□□□□ -1.32
SMAD1-205ENST00000506626 PCSK7Q16549 785 aa6.8□□□□□ -1.32
SMAD1-205ENST00000506626 CFAP70Q5T0N1 1121 aa6.8□□□□□ -1.32
SMAD1-205ENST00000506626 PCMTD2Q9NV79 361 aa6.8□□□□□ -1.32
SMAD1-205ENST00000506626 CPB1P15086 417 aa6.79□□□□□ -1.32
SMAD1-205ENST00000506626 DHX32Q7L7V1 743 aaKnown RBP6.79□□□□□ -1.32
SMAD1-205ENST00000506626 KRT25Q7Z3Z0 450 aa6.79□□□□□ -1.32
SMAD1-205ENST00000506626 FAM35AQ86V20 835 aa6.79□□□□□ -1.32
SMAD1-205ENST00000506626 DMRTC2Q8IXT2 367 aaPredicted RBP6.79□□□□□ -1.32
SMAD1-205ENST00000506626 VTI1AQ96AJ9 217 aa6.79□□□□□ -1.32
SMAD1-205ENST00000506626 LPIN3Q9BQK8 851 aa6.79□□□□□ -1.32
SMAD1-205ENST00000506626 C11orf16Q9NQ32 467 aa6.79□□□□□ -1.32
SMAD1-205ENST00000506626 ZFATQ9P243 1243 aa6.79□□□□□ -1.32
SMAD1-205ENST00000506626 ARID1BQ8NFD5 2236 aaPredicted RBP6.78□□□□□ -1.32
SMAD1-205ENST00000506626 MICAL2O94851 1124 aa6.78□□□□□ -1.32
SMAD1-205ENST00000506626 NOS3P29474 1203 aa6.78□□□□□ -1.32
SMAD1-205ENST00000506626 C11orf91Q3C1V1 193 aa6.78□□□□□ -1.32
SMAD1-205ENST00000506626 PRR23CQ6ZRP0 262 aa6.78□□□□□ -1.32
SMAD1-205ENST00000506626 FAM200AQ8TCP9 573 aa6.78□□□□□ -1.32
SMAD1-205ENST00000506626 WFDC12Q8WWY7 111 aa6.78□□□□□ -1.32
SMAD1-205ENST00000506626 IFT43Q96FT9 208 aa6.78□□□□□ -1.32
SMAD1-205ENST00000506626 MEGF10Q96KG7 1140 aa6.78□□□□□ -1.32
SMAD1-205ENST00000506626 FRRS1LQ9P0K9 344 aa6.78□□□□□ -1.32
SMAD1-205ENST00000506626 ZBTB42B2RXF5 422 aa6.77□□□□□ -1.33
SMAD1-205ENST00000506626 RARAP10276 462 aa6.77□□□□□ -1.33
SMAD1-205ENST00000506626 TARSP26639 723 aaKnown RBP6.77□□□□□ -1.33
SMAD1-205ENST00000506626 GPLD1P80108 840 aa6.77□□□□□ -1.33
SMAD1-205ENST00000506626 GRIK5Q16478 980 aa6.77□□□□□ -1.33
SMAD1-205ENST00000506626 PERM1Q5SV97 790 aa6.77□□□□□ -1.33
SMAD1-205ENST00000506626 TRPM4Q8TD43 1214 aa6.77□□□□□ -1.33
SMAD1-205ENST00000506626 SASH3O75995 380 aa6.76□□□□□ -1.33
SMAD1-205ENST00000506626 IREB2P48200 963 aaKnown RBP6.76□□□□□ -1.33
SMAD1-205ENST00000506626 IRAK1P51617 712 aa6.76□□□□□ -1.33
SMAD1-205ENST00000506626 MLLT1Q03111 559 aaPredicted RBP6.76□□□□□ -1.33
SMAD1-205ENST00000506626 FZD5Q13467 585 aa6.76□□□□□ -1.33
SMAD1-205ENST00000506626 MSL1Q68DK7 614 aa6.76□□□□□ -1.33
SMAD1-205ENST00000506626 DTWD1Q8N5C7 304 aa6.76□□□□□ -1.33
SMAD1-205ENST00000506626 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.76□□□□□ -1.33
SMAD1-205ENST00000506626 LRFN2Q9ULH4 789 aa6.76□□□□□ -1.33
SMAD1-205ENST00000506626 OPLAHO14841 1288 aa6.75□□□□□ -1.33
SMAD1-205ENST00000506626 TAL1P17542 331 aaPredicted RBP6.75□□□□□ -1.33
SMAD1-205ENST00000506626 SSTR4P31391 388 aa6.75□□□□□ -1.33
SMAD1-205ENST00000506626 NRLP54845 237 aa6.75□□□□□ -1.33
SMAD1-205ENST00000506626 PLAURQ03405 335 aa6.75□□□□□ -1.33
SMAD1-205ENST00000506626 CDCA8Q53HL2 280 aa6.75□□□□□ -1.33
SMAD1-205ENST00000506626 ELMSAN1Q6PJG2 1045 aa6.75□□□□□ -1.33
SMAD1-205ENST00000506626 TTC9Q92623 222 aa6.75□□□□□ -1.33
SMAD1-205ENST00000506626 KRTAP4-2Q9BYR5 136 aa6.75□□□□□ -1.33
SMAD1-205ENST00000506626 USP20Q9Y2K6 914 aa6.75□□□□□ -1.33
SMAD1-205ENST00000506626 RTCBQ9Y3I0 505 aaKnown RBP6.75□□□□□ -1.33
SMAD1-205ENST00000506626 EGFRP00533 1210 aa6.74□□□□□ -1.33
SMAD1-205ENST00000506626 FSTP19883 344 aa6.74□□□□□ -1.33
SMAD1-205ENST00000506626 RFX1P22670 979 aa6.74□□□□□ -1.33
SMAD1-205ENST00000506626 FKBP5Q13451 457 aaPredicted RBP6.74□□□□□ -1.33
SMAD1-205ENST00000506626 SLC51AQ86UW1 340 aa6.74□□□□□ -1.33
SMAD1-205ENST00000506626 FBXO11Q86XK2 927 aa6.74□□□□□ -1.33
SMAD1-205ENST00000506626 TREML1Q86YW5 311 aa6.74□□□□□ -1.33
SMAD1-205ENST00000506626 ZNF777Q9ULD5 760 aaPredicted RBP6.74□□□□□ -1.33
SMAD1-205ENST00000506626 NOVA2Q9UNW9 492 aaKnown RBP6.74□□□□□ -1.33
SMAD1-205ENST00000506626 OAS3Q9Y6K5 1087 aaKnown RBP6.74□□□□□ -1.33
SMAD1-205ENST00000506626 KIAA1324LA8MWY0 1029 aaPredicted RBP6.73□□□□□ -1.33
SMAD1-205ENST00000506626 ARID4AP29374 1257 aaPredicted RBP6.73□□□□□ -1.33
SMAD1-205ENST00000506626 WFDC8Q8IUA0 241 aa6.73□□□□□ -1.33
SMAD1-205ENST00000506626 RGL4Q8IZJ4 473 aa6.73□□□□□ -1.33
SMAD1-205ENST00000506626 SMG9Q9H0W8 520 aaKnown RBP6.73□□□□□ -1.33
SMAD1-205ENST00000506626 TLR7Q9NYK1 1049 aaKnown RBP6.73□□□□□ -1.33
SMAD1-205ENST00000506626 ACIN1Q9UKV3 1341 aaKnown RBP6.73□□□□□ -1.33
SMAD1-205ENST00000506626 XYLBO75191 536 aa6.72□□□□□ -1.33
SMAD1-205ENST00000506626 EIF2AK2P19525 551 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms