RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 DDX46Q7L014 1031 aaKnown RBP10.82□□□□□ -0.68
SNF8-204ENST00000506104 GLIS2Q9BZE0 524 aaPredicted RBP10.82□□□□□ -0.68
SNF8-204ENST00000506104 ADARB2Q9NS39 739 aaKnown RBP10.82□□□□□ -0.68
SNF8-204ENST00000506104 TRMT112Q9UI30 125 aaKnown RBP10.82□□□□□ -0.68
SNF8-204ENST00000506104 POLR2AP24928 1970 aaKnown RBP10.82□□□□□ -0.68
SNF8-204ENST00000506104 RIMBP2O15034 1052 aa10.81□□□□□ -0.68
SNF8-204ENST00000506104 CXCL9Q07325 125 aa10.81□□□□□ -0.68
SNF8-204ENST00000506104 RTL5Q5HYW3 569 aaPredicted RBP10.81□□□□□ -0.68
SNF8-204ENST00000506104 RBM26Q5T8P6 1007 aaKnown RBP10.81□□□□□ -0.68
SNF8-204ENST00000506104 COPS6Q7L5N1 327 aa10.81□□□□□ -0.68
SNF8-204ENST00000506104 CCDC146Q8IYE0 955 aa10.81□□□□□ -0.68
SNF8-204ENST00000506104 XAGE3Q8WTP9 111 aa10.81□□□□□ -0.68
SNF8-204ENST00000506104 GPRC5DQ9NZD1 345 aa10.81□□□□□ -0.68
SNF8-204ENST00000506104 ZNRF3Q9ULT6 936 aa10.81□□□□□ -0.68
SNF8-204ENST00000506104 ATP6V0A2Q9Y487 856 aa10.81□□□□□ -0.68
SNF8-204ENST00000506104 IBTKQ9P2D0 1353 aaPredicted RBP10.8□□□□□ -0.68
SNF8-204ENST00000506104 G3V3G9 751 aa10.8□□□□□ -0.68
SNF8-204ENST00000506104 TNIP1Q15025 636 aa10.8□□□□□ -0.68
SNF8-204ENST00000506104 DCAF8Q5TAQ9 597 aa10.8□□□□□ -0.68
SNF8-204ENST00000506104 CST9Q5W186 159 aa10.8□□□□□ -0.68
SNF8-204ENST00000506104 PLEKHF1Q96S99 279 aa10.8□□□□□ -0.68
SNF8-204ENST00000506104 TLL2Q9Y6L7 1015 aa10.8□□□□□ -0.68
SNF8-204ENST00000506104 RIC1Q4ADV7 1423 aa10.8□□□□□ -0.68
SNF8-204ENST00000506104 C6orf229H3BNL8 230 aa10.79□□□□□ -0.68
SNF8-204ENST00000506104 H7C1D1 291 aa10.79□□□□□ -0.68
SNF8-204ENST00000506104 HSP90AB3PQ58FF7 597 aa10.79□□□□□ -0.68
SNF8-204ENST00000506104 USP48Q86UV5 1035 aa10.79□□□□□ -0.68
SNF8-204ENST00000506104 ERBB4Q15303 1308 aa10.79□□□□□ -0.68
SNF8-204ENST00000506104 SNED1Q8TER0 1413 aa10.78□□□□□ -0.68
SNF8-204ENST00000506104 SHTN1A0MZ66 631 aa10.78□□□□□ -0.68
SNF8-204ENST00000506104 BBOX1O75936 387 aa10.78□□□□□ -0.68
SNF8-204ENST00000506104 LMOD3Q0VAK6 560 aa10.78□□□□□ -0.68
SNF8-204ENST00000506104 SP8Q8IXZ3 490 aa10.78□□□□□ -0.68
SNF8-204ENST00000506104 MICALL2Q8IY33 904 aa10.78□□□□□ -0.68
SNF8-204ENST00000506104 DBNDD1Q9H9R9 158 aa10.78□□□□□ -0.68
SNF8-204ENST00000506104 CNOT7Q9UIV1 285 aaKnown RBP10.78□□□□□ -0.68
SNF8-204ENST00000506104 NSFL1CQ9UNZ2 370 aaKnown RBP10.78□□□□□ -0.68
SNF8-204ENST00000506104 ZBTB12Q9Y330 459 aaPredicted RBP10.78□□□□□ -0.68
SNF8-204ENST00000506104 SH3TC1Q8TE82 1336 aa10.78□□□□□ -0.68
SNF8-204ENST00000506104 ATP5J2-PTCD1G3V325 749 aa10.77□□□□□ -0.69
SNF8-204ENST00000506104 TCIRG1Q13488 830 aa10.77□□□□□ -0.69
SNF8-204ENST00000506104 GRAPQ13588 217 aa10.77□□□□□ -0.69
SNF8-204ENST00000506104 KRT24Q2M2I5 525 aa10.77□□□□□ -0.69
SNF8-204ENST00000506104 TBC1D10BQ4KMP7 808 aaPredicted RBP10.77□□□□□ -0.69
SNF8-204ENST00000506104 DLK2Q6UY11 383 aa10.77□□□□□ -0.69
SNF8-204ENST00000506104 NLRP10Q86W26 655 aa10.77□□□□□ -0.69
SNF8-204ENST00000506104 GRAPLQ8TC17 118 aaPredicted RBP10.77□□□□□ -0.69
SNF8-204ENST00000506104 TRPM4Q8TD43 1214 aa10.77□□□□□ -0.69
SNF8-204ENST00000506104 PCNTO95613 3336 aa10.76□□□□□ -0.69
SNF8-204ENST00000506104 MAP2K2P36507 400 aa10.76□□□□□ -0.69
SNF8-204ENST00000506104 TMPOP42166 694 aaKnown RBP10.76□□□□□ -0.69
SNF8-204ENST00000506104 HUNKP57058 714 aa10.76□□□□□ -0.69
SNF8-204ENST00000506104 MLLT1Q03111 559 aaPredicted RBP10.76□□□□□ -0.69
SNF8-204ENST00000506104 KIAA2012Q0VF49 1180 aa10.76□□□□□ -0.69
SNF8-204ENST00000506104 DGKZQ13574 1117 aa10.76□□□□□ -0.69
SNF8-204ENST00000506104 PDIA6Q15084 440 aa10.76□□□□□ -0.69
SNF8-204ENST00000506104 DOK7Q18PE1 504 aa10.76□□□□□ -0.69
SNF8-204ENST00000506104 WASHC4Q2M389 1173 aa10.76□□□□□ -0.69
SNF8-204ENST00000506104 SLC10A5Q5PT55 438 aa10.76□□□□□ -0.69
SNF8-204ENST00000506104 CDC37L1Q7L3B6 337 aa10.76□□□□□ -0.69
SNF8-204ENST00000506104 SAMD7Q7Z3H4 446 aa10.76□□□□□ -0.69
SNF8-204ENST00000506104 VPS33BQ9H267 617 aa10.76□□□□□ -0.69
SNF8-204ENST00000506104 CHPF2Q9P2E5 772 aa10.76□□□□□ -0.69
SNF8-204ENST00000506104 AKAP11Q9UKA4 1901 aa10.76□□□□□ -0.69
SNF8-204ENST00000506104 DDX60Q8IY21 1712 aaKnown RBP10.75□□□□□ -0.69
SNF8-204ENST00000506104 PSMD14O00487 310 aa10.75□□□□□ -0.69
SNF8-204ENST00000506104 HIRAP54198 1017 aaPredicted RBP10.75□□□□□ -0.69
SNF8-204ENST00000506104 WDR43Q15061 677 aaKnown RBP eCLIP10.75□□□□□ -0.69
SNF8-204ENST00000506104 HDGFL1Q5TGJ6 251 aa10.75□□□□□ -0.69
SNF8-204ENST00000506104 SAPCD2Q86UD0 394 aa10.75□□□□□ -0.69
SNF8-204ENST00000506104 DCPSQ96C86 337 aaKnown RBP10.75□□□□□ -0.69
SNF8-204ENST00000506104 FAM89AQ96GI7 184 aa10.75□□□□□ -0.69
SNF8-204ENST00000506104 MCOLN1Q9GZU1 580 aa10.75□□□□□ -0.69
SNF8-204ENST00000506104 THSD7BQ9C0I4 1608 aa10.74□□□□□ -0.69
SNF8-204ENST00000506104 YDJCA8MPS7 323 aa10.74□□□□□ -0.69
SNF8-204ENST00000506104 KRT26Q7Z3Y9 468 aa10.74□□□□□ -0.69
SNF8-204ENST00000506104 C2orf69Q8N8R5 385 aa10.74□□□□□ -0.69
SNF8-204ENST00000506104 CELF1Q92879 486 aaKnown RBP10.74□□□□□ -0.69
SNF8-204ENST00000506104 CCDC85AQ96PX6 553 aaPredicted RBP10.74□□□□□ -0.69
SNF8-204ENST00000506104 EYA3Q99504 573 aa10.74□□□□□ -0.69
SNF8-204ENST00000506104 RTFDC1Q9BY42 306 aaPredicted RBP10.74□□□□□ -0.69
SNF8-204ENST00000506104 ADM5C9JUS6 153 aa10.73□□□□□ -0.69
SNF8-204ENST00000506104 ECE2O60344 883 aa10.73□□□□□ -0.69
SNF8-204ENST00000506104 GPSM2P81274 684 aa10.73□□□□□ -0.69
SNF8-204ENST00000506104 ANKRD13DQ6ZTN6 518 aa10.73□□□□□ -0.69
SNF8-204ENST00000506104 RIC3Q7Z5B4 369 aa10.73□□□□□ -0.69
SNF8-204ENST00000506104 FBXW7Q969H0 707 aa10.73□□□□□ -0.69
SNF8-204ENST00000506104 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.73□□□□□ -0.69
SNF8-204ENST00000506104 ANKIB1Q9P2G1 1089 aa10.73□□□□□ -0.69
SNF8-204ENST00000506104 ELL2O00472 640 aaPredicted RBP10.72□□□□□ -0.69
SNF8-204ENST00000506104 IRS4O14654 1257 aaPredicted RBP10.72□□□□□ -0.69
SNF8-204ENST00000506104 CA12O43570 354 aa10.72□□□□□ -0.69
SNF8-204ENST00000506104 ZNF157P51786 506 aaPredicted RBP10.72□□□□□ -0.69
SNF8-204ENST00000506104 BRPF1P55201 1214 aaPredicted RBP10.72□□□□□ -0.69
SNF8-204ENST00000506104 TMC4Q7Z404 712 aa10.72□□□□□ -0.69
SNF8-204ENST00000506104 LRP10Q7Z4F1 713 aa10.72□□□□□ -0.69
SNF8-204ENST00000506104 PLBD2Q8NHP8 589 aa10.72□□□□□ -0.69
SNF8-204ENST00000506104 ZC3H15Q8WU90 426 aaKnown RBP10.72□□□□□ -0.69
SNF8-204ENST00000506104 JARID2Q92833 1246 aaPredicted RBP10.72□□□□□ -0.69
SNF8-204ENST00000506104 ZIC5Q96T25 663 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms