RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 NPHP4O75161 1426 aaPredicted RBP9.07□□□□□ -0.96
PPARGC1A-204ENST00000506055 KDM4AO75164 1064 aa9.06□□□□□ -0.96
PPARGC1A-204ENST00000506055 KRT85P78386 507 aa9.06□□□□□ -0.96
PPARGC1A-204ENST00000506055 KIAA2012Q0VF49 1180 aa9.06□□□□□ -0.96
PPARGC1A-204ENST00000506055 DNTTIP2Q5QJE6 756 aaKnown RBP9.06□□□□□ -0.96
PPARGC1A-204ENST00000506055 CCDC129Q6ZRS4 1044 aa9.06□□□□□ -0.96
PPARGC1A-204ENST00000506055 SEC62Q99442 399 aaKnown RBP9.06□□□□□ -0.96
PPARGC1A-204ENST00000506055 SNRKQ9NRH2 765 aa9.06□□□□□ -0.96
PPARGC1A-204ENST00000506055 ATP5JP18859 108 aa9.06□□□□□ -0.96
PPARGC1A-204ENST00000506055 PDCP20941 246 aa9.06□□□□□ -0.96
PPARGC1A-204ENST00000506055 TTC6Q86TZ1 520 aa9.06□□□□□ -0.96
PPARGC1A-204ENST00000506055 C19orf44Q9H6X5 657 aa9.06□□□□□ -0.96
PPARGC1A-204ENST00000506055 TTC12Q9H892 705 aaPredicted RBP9.06□□□□□ -0.96
PPARGC1A-204ENST00000506055 COPRSQ9NQ92 184 aa9.06□□□□□ -0.96
PPARGC1A-204ENST00000506055 RGPD5Q99666 1765 aa9.06□□□□□ -0.96
PPARGC1A-204ENST00000506055 UQCRHLA0A096LP55 91 aa9.05□□□□□ -0.96
PPARGC1A-204ENST00000506055 GOLGA6L4A6NEF3 574 aa9.05□□□□□ -0.96
PPARGC1A-204ENST00000506055 UQCRHP07919 91 aa9.05□□□□□ -0.96
PPARGC1A-204ENST00000506055 DDX46Q7L014 1031 aaKnown RBP9.05□□□□□ -0.96
PPARGC1A-204ENST00000506055 FMNL2Q96PY5 1086 aa9.05□□□□□ -0.96
PPARGC1A-204ENST00000506055 DBNDD2Q9BQY9 259 aa9.05□□□□□ -0.96
PPARGC1A-204ENST00000506055 FAM13BQ9NYF5 915 aa9.05□□□□□ -0.96
PPARGC1A-204ENST00000506055 MED23Q9ULK4 1368 aa9.05□□□□□ -0.96
PPARGC1A-204ENST00000506055 CYP27B1O15528 508 aa9.05□□□□□ -0.96
PPARGC1A-204ENST00000506055 HSP90B1P14625 803 aaKnown RBP9.05□□□□□ -0.96
PPARGC1A-204ENST00000506055 RFX5P48382 616 aaPredicted RBP9.05□□□□□ -0.96
PPARGC1A-204ENST00000506055 TERF1P54274 439 aa9.05□□□□□ -0.96
PPARGC1A-204ENST00000506055 CABP4P57796 275 aa9.05□□□□□ -0.96
PPARGC1A-204ENST00000506055 LRP10Q7Z4F1 713 aa9.05□□□□□ -0.96
PPARGC1A-204ENST00000506055 DCAF5Q96JK2 942 aa9.05□□□□□ -0.96
PPARGC1A-204ENST00000506055 NEUROD6Q96NK8 337 aa9.05□□□□□ -0.96
PPARGC1A-204ENST00000506055 NEK1Q96PY6 1258 aa9.05□□□□□ -0.96
PPARGC1A-204ENST00000506055 FUCA2Q9BTY2 467 aa9.05□□□□□ -0.96
PPARGC1A-204ENST00000506055 HMG20BQ9P0W2 317 aa9.05□□□□□ -0.96
PPARGC1A-204ENST00000506055 CCDC192P0DO97 292 aa9.04□□□□□ -0.96
PPARGC1A-204ENST00000506055 LIG1P18858 919 aa9.04□□□□□ -0.96
PPARGC1A-204ENST00000506055 LMBR1LQ6UX01 489 aa9.04□□□□□ -0.96
PPARGC1A-204ENST00000506055 C17orf53Q8N3J3 647 aaPredicted RBP9.04□□□□□ -0.96
PPARGC1A-204ENST00000506055 LRRC2Q9BYS8 371 aa9.04□□□□□ -0.96
PPARGC1A-204ENST00000506055 COL15A1P39059 1388 aa9.04□□□□□ -0.96
PPARGC1A-204ENST00000506055 SIPA1L3O60292 1781 aaPredicted RBP9.04□□□□□ -0.96
PPARGC1A-204ENST00000506055 C1orf167Q5SNV9 1468 aa9.04□□□□□ -0.96
PPARGC1A-204ENST00000506055 AP5Z1O43299 807 aa9.04□□□□□ -0.96
PPARGC1A-204ENST00000506055 JAK2O60674 1132 aa9.04□□□□□ -0.96
PPARGC1A-204ENST00000506055 ATF3P18847 181 aa9.04□□□□□ -0.96
PPARGC1A-204ENST00000506055 FGD1P98174 961 aa9.04□□□□□ -0.96
PPARGC1A-204ENST00000506055 SLFNL1Q499Z3 407 aa9.04□□□□□ -0.96
PPARGC1A-204ENST00000506055 Q6ZUG5 572 aa9.04□□□□□ -0.96
PPARGC1A-204ENST00000506055 CKAP2LQ8IYA6 745 aa9.04□□□□□ -0.96
PPARGC1A-204ENST00000506055 DDX11Q96FC9 970 aa9.04□□□□□ -0.96
PPARGC1A-204ENST00000506055 SPATA32Q96LK8 384 aa9.04□□□□□ -0.96
PPARGC1A-204ENST00000506055 MEGF6O75095 1541 aa9.04□□□□□ -0.96
PPARGC1A-204ENST00000506055 KRT32Q14532 448 aa9.03□□□□□ -0.96
PPARGC1A-204ENST00000506055 TSGA10IPQ3SY00 556 aa9.03□□□□□ -0.96
PPARGC1A-204ENST00000506055 MCMDC2Q4G0Z9 681 aa9.03□□□□□ -0.96
PPARGC1A-204ENST00000506055 USPL1Q5W0Q7 1092 aa9.03□□□□□ -0.96
PPARGC1A-204ENST00000506055 SPC24Q8NBT2 197 aa9.03□□□□□ -0.96
PPARGC1A-204ENST00000506055 SCAND2PQ9GZW5 306 aaPredicted RBP9.03□□□□□ -0.96
PPARGC1A-204ENST00000506055 ALDH8A1Q9H2A2 487 aaPredicted RBP9.03□□□□□ -0.96
PPARGC1A-204ENST00000506055 DACT1Q9NYF0 836 aa9.03□□□□□ -0.96
PPARGC1A-204ENST00000506055 C5P01031 1676 aa9.03□□□□□ -0.96
PPARGC1A-204ENST00000506055 CYP21A2P08686 494 aa9.03□□□□□ -0.96
PPARGC1A-204ENST00000506055 PDIA4P13667 645 aaKnown RBP9.03□□□□□ -0.96
PPARGC1A-204ENST00000506055 TIMM10P62072 90 aa9.03□□□□□ -0.96
PPARGC1A-204ENST00000506055 NOLC1Q14978 699 aaKnown RBP eCLIP9.03□□□□□ -0.96
PPARGC1A-204ENST00000506055 GLIPR1L2Q4G1C9 344 aa9.03□□□□□ -0.96
PPARGC1A-204ENST00000506055 NUP62CLQ9H1M0 184 aa9.03□□□□□ -0.96
PPARGC1A-204ENST00000506055 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.03□□□□□ -0.961e-8■□□□□ 10.9
PPARGC1A-204ENST00000506055 GOLIM4O00461 696 aa9.02□□□□□ -0.96
PPARGC1A-204ENST00000506055 MAP3K11Q16584 847 aa9.02□□□□□ -0.96
PPARGC1A-204ENST00000506055 RABL6Q3YEC7 729 aaPredicted RBP9.02□□□□□ -0.96
PPARGC1A-204ENST00000506055 PLBD2Q8NHP8 589 aa9.02□□□□□ -0.96
PPARGC1A-204ENST00000506055 BRF1Q92994 677 aa9.02□□□□□ -0.96
PPARGC1A-204ENST00000506055 HAUS7Q99871 368 aa9.02□□□□□ -0.96
PPARGC1A-204ENST00000506055 TNMDQ9H2S6 317 aa9.02□□□□□ -0.96
PPARGC1A-204ENST00000506055 ZNF609O15014 1411 aa9.02□□□□□ -0.97
PPARGC1A-204ENST00000506055 H3BQV1 296 aa9.02□□□□□ -0.97
PPARGC1A-204ENST00000506055 FOSBP53539 338 aa9.02□□□□□ -0.97
PPARGC1A-204ENST00000506055 CEBPZQ03701 1054 aaKnown RBP9.02□□□□□ -0.97
PPARGC1A-204ENST00000506055 IFFO2Q5TF58 517 aa9.02□□□□□ -0.97
PPARGC1A-204ENST00000506055 SASS6Q6UVJ0 657 aa9.02□□□□□ -0.97
PPARGC1A-204ENST00000506055 LUZP1Q86V48 1076 aa9.02□□□□□ -0.97
PPARGC1A-204ENST00000506055 LEO1Q8WVC0 666 aaPredicted RBP9.02□□□□□ -0.97
PPARGC1A-204ENST00000506055 PIBF1Q8WXW3 757 aa9.02□□□□□ -0.97
PPARGC1A-204ENST00000506055 GTF3C6Q969F1 213 aa9.02□□□□□ -0.97
PPARGC1A-204ENST00000506055 PDCL3Q9H2J4 239 aa9.02□□□□□ -0.97
PPARGC1A-204ENST00000506055 U3KPZ7 1027 aaPredicted RBP9.02□□□□□ -0.97
PPARGC1A-204ENST00000506055 TRPM3Q9HCF6 1732 aaPredicted RBP9.02□□□□□ -0.97
PPARGC1A-204ENST00000506055 ELP1O95163 1332 aa9.02□□□□□ -0.97
PPARGC1A-204ENST00000506055 PPFIA3O75145 1194 aa9.01□□□□□ -0.97
PPARGC1A-204ENST00000506055 NAP1L2Q9ULW6 460 aaPredicted RBP9.01□□□□□ -0.97
PPARGC1A-204ENST00000506055 CAMTA1Q9Y6Y1 1673 aa9.01□□□□□ -0.97
PPARGC1A-204ENST00000506055 NR1I2O75469 434 aa9.01□□□□□ -0.97
PPARGC1A-204ENST00000506055 CASP7P55210 303 aa9.01□□□□□ -0.97
PPARGC1A-204ENST00000506055 FOXO4P98177 505 aa9.01□□□□□ -0.97
PPARGC1A-204ENST00000506055 TYRO3Q06418 890 aa9.01□□□□□ -0.97
PPARGC1A-204ENST00000506055 TTLL7Q6ZT98 887 aa9.01□□□□□ -0.97
PPARGC1A-204ENST00000506055 BICD2Q8TD16 824 aa9.01□□□□□ -0.97
PPARGC1A-204ENST00000506055 PAG1Q9NWQ8 432 aa9.01□□□□□ -0.97
PPARGC1A-204ENST00000506055 JCADQ9P266 1359 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms