RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 SOWAHDA6NJG2 315 aa6.22□□□□□ -1.41
TRAPPC13-208ENST00000505553 TMEM229AB2RXF0 380 aa6.22□□□□□ -1.41
TRAPPC13-208ENST00000505553 FAM69CQ0P6D2 419 aa6.22□□□□□ -1.41
TRAPPC13-208ENST00000505553 PRR23CQ6ZRP0 262 aa6.22□□□□□ -1.41
TRAPPC13-208ENST00000505553 JPH1Q9HDC5 661 aaPredicted RBP6.22□□□□□ -1.41
TRAPPC13-208ENST00000505553 PCDHGA11Q9Y5H2 935 aa6.22□□□□□ -1.41
TRAPPC13-208ENST00000505553 GPC6Q9Y625 555 aaPredicted RBP6.22□□□□□ -1.41
TRAPPC13-208ENST00000505553 CD97P48960 835 aa6.21□□□□□ -1.42
TRAPPC13-208ENST00000505553 GTF2IP78347 998 aa6.21□□□□□ -1.42
TRAPPC13-208ENST00000505553 SFSWAPQ12872 951 aaKnown RBP6.21□□□□□ -1.42
TRAPPC13-208ENST00000505553 MTFR1Q15390 333 aa6.21□□□□□ -1.42
TRAPPC13-208ENST00000505553 LRRC69Q6ZNQ3 347 aa6.21□□□□□ -1.42
TRAPPC13-208ENST00000505553 OGFOD1Q8N543 542 aa6.21□□□□□ -1.42
TRAPPC13-208ENST00000505553 IQSEC3Q9UPP2 1182 aaPredicted RBP6.21□□□□□ -1.42
TRAPPC13-208ENST00000505553 RBM19Q9Y4C8 960 aaKnown RBP6.21□□□□□ -1.42
TRAPPC13-208ENST00000505553 IREB2P48200 963 aaKnown RBP6.2□□□□□ -1.42
TRAPPC13-208ENST00000505553 DPYDQ12882 1025 aa6.2□□□□□ -1.42
TRAPPC13-208ENST00000505553 DNAJC14Q6Y2X3 702 aaPredicted RBP6.2□□□□□ -1.42
TRAPPC13-208ENST00000505553 LARGE2Q8N3Y3 721 aa6.2□□□□□ -1.42
TRAPPC13-208ENST00000505553 LOC105371045A0A1W2PR82 267 aa6.19□□□□□ -1.42
TRAPPC13-208ENST00000505553 UNCXA6NJT0 531 aa6.19□□□□□ -1.42
TRAPPC13-208ENST00000505553 FSTP19883 344 aa6.19□□□□□ -1.42
TRAPPC13-208ENST00000505553 GP2P55259 537 aaKnown RBP6.19□□□□□ -1.42
TRAPPC13-208ENST00000505553 DTWD1Q8N5C7 304 aa6.19□□□□□ -1.42
TRAPPC13-208ENST00000505553 BIN2Q9UBW5 565 aaPredicted RBP6.19□□□□□ -1.42
TRAPPC13-208ENST00000505553 OAS3Q9Y6K5 1087 aaKnown RBP6.19□□□□□ -1.42
TRAPPC13-208ENST00000505553 SERPINB4P48594 390 aa6.18□□□□□ -1.42
TRAPPC13-208ENST00000505553 DMRTC2Q8IXT2 367 aaPredicted RBP6.18□□□□□ -1.42
TRAPPC13-208ENST00000505553 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.18□□□□□ -1.42
TRAPPC13-208ENST00000505553 BCL2L13Q9BXK5 485 aa6.18□□□□□ -1.42
TRAPPC13-208ENST00000505553 KRTAP4-2Q9BYR5 136 aa6.18□□□□□ -1.42
TRAPPC13-208ENST00000505553 SLAIN2Q9P270 581 aa6.18□□□□□ -1.42
TRAPPC13-208ENST00000505553 PARP3Q9Y6F1 533 aa6.18□□□□□ -1.42
TRAPPC13-208ENST00000505553 PTCD1O75127 700 aaKnown RBP6.17□□□□□ -1.42
TRAPPC13-208ENST00000505553 NOS3P29474 1203 aa6.17□□□□□ -1.42
TRAPPC13-208ENST00000505553 TXLNAP40222 546 aa6.17□□□□□ -1.42
TRAPPC13-208ENST00000505553 RAB44Q7Z6P3 723 aaPredicted RBP6.17□□□□□ -1.42
TRAPPC13-208ENST00000505553 NUDT8Q8WV74 236 aa6.17□□□□□ -1.42
TRAPPC13-208ENST00000505553 MRRFQ96E11 262 aaKnown RBP6.17□□□□□ -1.42
TRAPPC13-208ENST00000505553 ZNF594Q96JF6 807 aaPredicted RBP6.17□□□□□ -1.42
TRAPPC13-208ENST00000505553 UBE2OQ9C0C9 1292 aaKnown RBP6.17□□□□□ -1.42
TRAPPC13-208ENST00000505553 ZNF358Q9NW07 568 aa6.17□□□□□ -1.42
TRAPPC13-208ENST00000505553 SCHIP1Q9P0W5 487 aaPredicted RBP6.17□□□□□ -1.42
TRAPPC13-208ENST00000505553 EGFL7Q9UHF1 273 aa6.17□□□□□ -1.42
TRAPPC13-208ENST00000505553 USP3Q9Y6I4 520 aa6.17□□□□□ -1.42
TRAPPC13-208ENST00000505553 SEC13P55735 322 aa6.16□□□□□ -1.42
TRAPPC13-208ENST00000505553 CLDN10P78369 228 aa6.16□□□□□ -1.42
TRAPPC13-208ENST00000505553 TBC1D8BQ0IIM8 1120 aa6.16□□□□□ -1.42
TRAPPC13-208ENST00000505553 ZNF326Q5BKZ1 582 aaKnown RBP6.16□□□□□ -1.42
TRAPPC13-208ENST00000505553 SIX5Q8N196 739 aa6.16□□□□□ -1.42
TRAPPC13-208ENST00000505553 L3MBTL2Q969R5 705 aa6.16□□□□□ -1.42
TRAPPC13-208ENST00000505553 SLC6A14Q9UN76 642 aa6.16□□□□□ -1.42
TRAPPC13-208ENST00000505553 ZNF232Q9UNY5 417 aa6.16□□□□□ -1.42
TRAPPC13-208ENST00000505553 EML1O00423 815 aa6.16□□□□□ -1.42
TRAPPC13-208ENST00000505553 GSC2O15499 205 aa6.16□□□□□ -1.42
TRAPPC13-208ENST00000505553 ZNF16P17020 682 aaPredicted RBP6.16□□□□□ -1.42
TRAPPC13-208ENST00000505553 NOS2P35228 1153 aa6.16□□□□□ -1.42
TRAPPC13-208ENST00000505553 AFF1P51825 1210 aaKnown RBP6.16□□□□□ -1.42
TRAPPC13-208ENST00000505553 TEAD4Q15561 434 aa6.16□□□□□ -1.42
TRAPPC13-208ENST00000505553 IGF2-ASQ6U949 168 aa6.16□□□□□ -1.42
TRAPPC13-208ENST00000505553 FBXO11Q86XK2 927 aa6.16□□□□□ -1.42
TRAPPC13-208ENST00000505553 MEGF10Q96KG7 1140 aa6.16□□□□□ -1.42
TRAPPC13-208ENST00000505553 BCL11AQ9H165 835 aa6.16□□□□□ -1.42
TRAPPC13-208ENST00000505553 BRD7Q9NPI1 651 aa6.16□□□□□ -1.42
TRAPPC13-208ENST00000505553 IGSF5Q9NSI5 407 aa6.16□□□□□ -1.42
TRAPPC13-208ENST00000505553 USP35Q9P2H5 1018 aa6.16□□□□□ -1.42
TRAPPC13-208ENST00000505553 KCNH4Q9UQ05 1017 aa6.16□□□□□ -1.42
TRAPPC13-208ENST00000505553 KIAA1324LA8MWY0 1029 aaPredicted RBP6.15□□□□□ -1.43
TRAPPC13-208ENST00000505553 RGS9O75916 674 aaPredicted RBP6.15□□□□□ -1.43
TRAPPC13-208ENST00000505553 KCNQ4P56696 695 aa6.15□□□□□ -1.43
TRAPPC13-208ENST00000505553 PSAPL1Q6NUJ1 521 aa6.15□□□□□ -1.43
TRAPPC13-208ENST00000505553 SLC9A9Q8IVB4 645 aa6.15□□□□□ -1.43
TRAPPC13-208ENST00000505553 TNS4Q8IZW8 715 aa6.15□□□□□ -1.43
TRAPPC13-208ENST00000505553 BHMTQ93088 406 aa6.15□□□□□ -1.43
TRAPPC13-208ENST00000505553 CEP63Q96MT8 703 aa6.15□□□□□ -1.43
TRAPPC13-208ENST00000505553 EFCC1Q9HA90 598 aa6.15□□□□□ -1.43
TRAPPC13-208ENST00000505553 ANKIB1Q9P2G1 1089 aa6.15□□□□□ -1.43
TRAPPC13-208ENST00000505553 SERTM1A2A2V5 107 aa6.14□□□□□ -1.43
TRAPPC13-208ENST00000505553 ANKRD33BA6NCL7 494 aa6.14□□□□□ -1.43
TRAPPC13-208ENST00000505553 JAG1P78504 1218 aa6.14□□□□□ -1.43
TRAPPC13-208ENST00000505553 CCDC102BQ68D86 513 aa6.14□□□□□ -1.43
TRAPPC13-208ENST00000505553 TPCN2Q8NHX9 752 aa6.14□□□□□ -1.43
TRAPPC13-208ENST00000505553 GIPC2Q8TF65 315 aa6.14□□□□□ -1.43
TRAPPC13-208ENST00000505553 ZDHHC1Q8WTX9 485 aa6.14□□□□□ -1.43
TRAPPC13-208ENST00000505553 IGFLR1Q9H665 355 aa6.14□□□□□ -1.43
TRAPPC13-208ENST00000505553 CXXC1Q9P0U4 656 aaPredicted RBP6.14□□□□□ -1.43
TRAPPC13-208ENST00000505553 KIAA1522Q9P206 1035 aaPredicted RBP6.14□□□□□ -1.43
TRAPPC13-208ENST00000505553 CHMP3Q9Y3E7 222 aa6.14□□□□□ -1.43
TRAPPC13-208ENST00000505553 ZBTB7BO15156 539 aaPredicted RBP6.13□□□□□ -1.43
TRAPPC13-208ENST00000505553 PRMT3O60678 531 aa6.13□□□□□ -1.43
TRAPPC13-208ENST00000505553 ABL1P00519 1130 aa6.13□□□□□ -1.43
TRAPPC13-208ENST00000505553 TBCELQ5QJ74 424 aa6.13□□□□□ -1.43
TRAPPC13-208ENST00000505553 MSL1Q68DK7 614 aa6.13□□□□□ -1.43
TRAPPC13-208ENST00000505553 ILDR2Q71H61 639 aa6.13□□□□□ -1.43
TRAPPC13-208ENST00000505553 RHPN1Q8TCX5 695 aa6.13□□□□□ -1.43
TRAPPC13-208ENST00000505553 ICMTO60725 284 aa6.12□□□□□ -1.43
TRAPPC13-208ENST00000505553 DKK1O94907 266 aa6.12□□□□□ -1.43
TRAPPC13-208ENST00000505553 EPHA4P54764 986 aa6.12□□□□□ -1.43
TRAPPC13-208ENST00000505553 GLYCTKQ8IVS8 523 aa6.12□□□□□ -1.43
TRAPPC13-208ENST00000505553 H3BRB1 525 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms