RNA–Protein interactions for RNA: ENST00000505108.1

TRAPPC13-207, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-207ENST00000505108 PRR12Q9ULL5 1215 aa10.19□□□□□ -0.78
TRAPPC13-207ENST00000505108 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.19□□□□□ -0.78
TRAPPC13-207ENST00000505108 PCBP4P57723 403 aaKnown RBP10.18□□□□□ -0.78
TRAPPC13-207ENST00000505108 PDE3BQ13370 1112 aa10.18□□□□□ -0.78
TRAPPC13-207ENST00000505108 ZNF468Q5VIY5 522 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC13-207ENST00000505108 SYT9Q86SS6 491 aa10.18□□□□□ -0.78
TRAPPC13-207ENST00000505108 TTC16Q8NEE8 873 aa10.18□□□□□ -0.78
TRAPPC13-207ENST00000505108 NIF3L1Q9GZT8 377 aa10.18□□□□□ -0.78
TRAPPC13-207ENST00000505108 TREHO43280 583 aa10.17□□□□□ -0.78
TRAPPC13-207ENST00000505108 MMP20O60882 483 aa10.17□□□□□ -0.78
TRAPPC13-207ENST00000505108 RARAP10276 462 aa10.17□□□□□ -0.78
TRAPPC13-207ENST00000505108 EHHADHQ08426 723 aa10.17□□□□□ -0.78
TRAPPC13-207ENST00000505108 DSC3Q14574 896 aa10.17□□□□□ -0.78
TRAPPC13-207ENST00000505108 ZSCAN29Q8IWY8 852 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC13-207ENST00000505108 DMRTB1Q96MA1 342 aa10.17□□□□□ -0.78
TRAPPC13-207ENST00000505108 PNMA5Q96PV4 448 aa10.17□□□□□ -0.78
TRAPPC13-207ENST00000505108 CNTN3Q9P232 1028 aa10.17□□□□□ -0.78
TRAPPC13-207ENST00000505108 FOXD3Q9UJU5 478 aaPredicted RBP10.17□□□□□ -0.78
TRAPPC13-207ENST00000505108 TNFRSF21O75509 655 aa10.16□□□□□ -0.78
TRAPPC13-207ENST00000505108 MAP3K6O95382 1288 aa10.15□□□□□ -0.78
TRAPPC13-207ENST00000505108 ADAMTS2O95450 1211 aa10.15□□□□□ -0.78
TRAPPC13-207ENST00000505108 SRSF11Q05519 484 aaKnown RBP10.15□□□□□ -0.78
TRAPPC13-207ENST00000505108 ORC1Q13415 861 aa10.15□□□□□ -0.78
TRAPPC13-207ENST00000505108 NPAS4Q8IUM7 802 aa10.15□□□□□ -0.78
TRAPPC13-207ENST00000505108 ALKBH8Q96BT7 664 aaKnown RBP10.15□□□□□ -0.78
TRAPPC13-207ENST00000505108 ABI2Q9NYB9 513 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC13-207ENST00000505108 CCDC9Q9Y3X0 531 aaKnown RBP10.15□□□□□ -0.78
TRAPPC13-207ENST00000505108 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC13-207ENST00000505108 CYP2E1P05181 493 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC13-207ENST00000505108 ARAFP10398 606 aa10.14□□□□□ -0.79
TRAPPC13-207ENST00000505108 MAP2K3P46734 347 aa10.14□□□□□ -0.79
TRAPPC13-207ENST00000505108 C1orf127Q8N9H9 656 aa10.14□□□□□ -0.79
TRAPPC13-207ENST00000505108 CHRDQ9H2X0 955 aa10.14□□□□□ -0.79
TRAPPC13-207ENST00000505108 NSFL1CQ9UNZ2 370 aaKnown RBP10.14□□□□□ -0.79
TRAPPC13-207ENST00000505108 NEURL1BA8MQ27 555 aa10.13□□□□□ -0.79
TRAPPC13-207ENST00000505108 FCHSD1Q86WN1 690 aa10.13□□□□□ -0.79
TRAPPC13-207ENST00000505108 ACDQ96AP0 544 aa10.13□□□□□ -0.79
TRAPPC13-207ENST00000505108 EFCC1Q9HA90 598 aa10.13□□□□□ -0.79
TRAPPC13-207ENST00000505108 TLR7Q9NYK1 1049 aaKnown RBP10.13□□□□□ -0.79
TRAPPC13-207ENST00000505108 GGA1Q9UJY5 639 aa10.13□□□□□ -0.79
TRAPPC13-207ENST00000505108 SIN3BO75182 1162 aa10.12□□□□□ -0.79
TRAPPC13-207ENST00000505108 P4HBP07237 508 aaKnown RBP10.12□□□□□ -0.79
TRAPPC13-207ENST00000505108 PLCB3Q01970 1234 aa10.12□□□□□ -0.79
TRAPPC13-207ENST00000505108 FMR1Q06787 632 aaKnown RBP eCLIP10.12□□□□□ -0.79
TRAPPC13-207ENST00000505108 NEUROD1Q13562 356 aa10.12□□□□□ -0.79
TRAPPC13-207ENST00000505108 TTC39BQ5VTQ0 682 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC13-207ENST00000505108 DHX32Q7L7V1 743 aaKnown RBP10.12□□□□□ -0.79
TRAPPC13-207ENST00000505108 RGS22Q8NE09 1264 aa10.12□□□□□ -0.79
TRAPPC13-207ENST00000505108 OR13H1Q8NG92 308 aa10.12□□□□□ -0.79
TRAPPC13-207ENST00000505108 OXCT2Q9BYC2 517 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC13-207ENST00000505108 IGFLR1Q9H665 355 aa10.12□□□□□ -0.79
TRAPPC13-207ENST00000505108 AVENQ9NQS1 362 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC13-207ENST00000505108 ZBTB42B2RXF5 422 aa10.11□□□□□ -0.79
TRAPPC13-207ENST00000505108 SLURP2P0DP57 97 aa10.11□□□□□ -0.79
TRAPPC13-207ENST00000505108 ADH6P28332 368 aa10.11□□□□□ -0.79
TRAPPC13-207ENST00000505108 USPL1Q5W0Q7 1092 aa10.11□□□□□ -0.79
TRAPPC13-207ENST00000505108 C1orf229Q6ZS94 237 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC13-207ENST00000505108 SNX29Q8TEQ0 813 aa10.11□□□□□ -0.79
TRAPPC13-207ENST00000505108 MDFIQ99750 246 aa10.11□□□□□ -0.79
TRAPPC13-207ENST00000505108 EREGO14944 169 aa10.1□□□□□ -0.79
TRAPPC13-207ENST00000505108 PHACTR2O75167 634 aa10.1□□□□□ -0.79
TRAPPC13-207ENST00000505108 COL13A1Q5TAT6 717 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC13-207ENST00000505108 ZFYVE28Q9HCC9 887 aa10.1□□□□□ -0.79
TRAPPC13-207ENST00000505108 KANSL3Q9P2N6 904 aa10.1□□□□□ -0.79
TRAPPC13-207ENST00000505108 EIF1AYO14602 144 aaKnown RBP10.09□□□□□ -0.79
TRAPPC13-207ENST00000505108 MLLT1Q03111 559 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC13-207ENST00000505108 TBC1D8BQ0IIM8 1120 aa10.09□□□□□ -0.79
TRAPPC13-207ENST00000505108 SETDB2Q96T68 719 aa10.09□□□□□ -0.79
TRAPPC13-207ENST00000505108 DNAJB12Q9NXW2 375 aaKnown RBP10.09□□□□□ -0.79
TRAPPC13-207ENST00000505108 POLR3DP05423 398 aaPredicted RBP10.08□□□□□ -0.8
TRAPPC13-207ENST00000505108 PSAPP07602 524 aa10.08□□□□□ -0.8
TRAPPC13-207ENST00000505108 MAPK8P45983 427 aa10.08□□□□□ -0.8
TRAPPC13-207ENST00000505108 TRPM4Q8TD43 1214 aa10.08□□□□□ -0.8
TRAPPC13-207ENST00000505108 WHAMMQ8TF30 809 aa10.08□□□□□ -0.8
TRAPPC13-207ENST00000505108 TNFRSF25Q93038 417 aa10.08□□□□□ -0.8
TRAPPC13-207ENST00000505108 NSUN5Q96P11 429 aaKnown RBP10.08□□□□□ -0.8
TRAPPC13-207ENST00000505108 CSRNP1Q96S65 589 aa10.08□□□□□ -0.8
TRAPPC13-207ENST00000505108 UBE2OQ9C0C9 1292 aaKnown RBP10.08□□□□□ -0.8
TRAPPC13-207ENST00000505108 HOXD8P13378 290 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC13-207ENST00000505108 ERCC3P19447 782 aa10.07□□□□□ -0.8
TRAPPC13-207ENST00000505108 CES1P23141 567 aa10.07□□□□□ -0.8
TRAPPC13-207ENST00000505108 SOX18P35713 384 aa10.07□□□□□ -0.8
TRAPPC13-207ENST00000505108 TAGLNQ01995 201 aaKnown RBP10.07□□□□□ -0.8
TRAPPC13-207ENST00000505108 PLAURQ03405 335 aa10.07□□□□□ -0.8
TRAPPC13-207ENST00000505108 ENOX2Q16206 610 aaKnown RBP10.07□□□□□ -0.8
TRAPPC13-207ENST00000505108 SLCO4C1Q6ZQN7 724 aa10.07□□□□□ -0.8
TRAPPC13-207ENST00000505108 FBXO33Q7Z6M2 555 aa10.07□□□□□ -0.8
TRAPPC13-207ENST00000505108 GOLGA6L1Q8N7Z2 621 aa10.07□□□□□ -0.8
TRAPPC13-207ENST00000505108 FOXD4L4Q8WXT5 416 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC13-207ENST00000505108 GDF2Q9UK05 429 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC13-207ENST00000505108 WWC3Q9ULE0 1092 aa10.07□□□□□ -0.8
TRAPPC13-207ENST00000505108 PNMA6FA0A0J9YX94 578 aa10.06□□□□□ -0.8
TRAPPC13-207ENST00000505108 ADARB2-AS1A8MUL3 147 aa10.06□□□□□ -0.8
TRAPPC13-207ENST00000505108 CPNE3O75131 537 aaKnown RBP10.06□□□□□ -0.8
TRAPPC13-207ENST00000505108 ADH7P40394 386 aa10.06□□□□□ -0.8
TRAPPC13-207ENST00000505108 NRLP54845 237 aa10.06□□□□□ -0.8
TRAPPC13-207ENST00000505108 GPLD1P80108 840 aa10.06□□□□□ -0.8
TRAPPC13-207ENST00000505108 LYPD4Q6UWN0 246 aa10.06□□□□□ -0.8
TRAPPC13-207ENST00000505108 HFE2Q6ZVN8 426 aa10.06□□□□□ -0.8
TRAPPC13-207ENST00000505108 SLC6A14Q9UN76 642 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms