RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 RABL6Q3YEC7 729 aaPredicted RBP12.84□□□□□ -0.35
RFC1-210ENST00000505077 ERFEQ4G0M1 354 aa12.84□□□□□ -0.35
RFC1-210ENST00000505077 NUTM1Q86Y26 1132 aa12.84□□□□□ -0.35
RFC1-210ENST00000505077 BRIP1Q9BX63 1249 aa12.84□□□□□ -0.35
RFC1-210ENST00000505077 LRRFIP2Q9Y608 721 aaKnown RBP12.84□□□□□ -0.35
RFC1-210ENST00000505077 KLRG2A4D1S0 409 aaPredicted RBP12.83□□□□□ -0.36
RFC1-210ENST00000505077 FAM177BA6PVY3 158 aa12.83□□□□□ -0.36
RFC1-210ENST00000505077 PDE6BP35913 854 aa12.83□□□□□ -0.36
RFC1-210ENST00000505077 PTGER2P43116 358 aa12.83□□□□□ -0.36
RFC1-210ENST00000505077 RPAP2Q8IXW5 612 aaPredicted RBP12.83□□□□□ -0.36
RFC1-210ENST00000505077 SUCLG2Q96I99 432 aa12.83□□□□□ -0.36
RFC1-210ENST00000505077 NLRP3Q96P20 1036 aa12.83□□□□□ -0.36
RFC1-210ENST00000505077 SF3B3Q15393 1217 aaKnown RBP12.82□□□□□ -0.36
RFC1-210ENST00000505077 CRY2Q49AN0 593 aa12.82□□□□□ -0.36
RFC1-210ENST00000505077 CCDC152Q4G0S7 254 aa12.82□□□□□ -0.36
RFC1-210ENST00000505077 EXOC6Q8TAG9 804 aa12.82□□□□□ -0.36
RFC1-210ENST00000505077 KAZALD1Q96I82 304 aa12.82□□□□□ -0.36
RFC1-210ENST00000505077 BICC1Q9H694 974 aaKnown RBP12.82□□□□□ -0.36
RFC1-210ENST00000505077 ARAP2Q8WZ64 1704 aa12.82□□□□□ -0.36
RFC1-210ENST00000505077 MYH13Q9UKX3 1938 aa12.82□□□□□ -0.36
RFC1-210ENST00000505077 HMMRO75330 724 aa12.81□□□□□ -0.36
RFC1-210ENST00000505077 CSF1RP07333 972 aa12.81□□□□□ -0.36
RFC1-210ENST00000505077 HCLS1P14317 486 aaPredicted RBP12.81□□□□□ -0.36
RFC1-210ENST00000505077 IRX6P78412 446 aaPredicted RBP12.81□□□□□ -0.36
RFC1-210ENST00000505077 FOXO4P98177 505 aa12.81□□□□□ -0.36
RFC1-210ENST00000505077 RTL5Q5HYW3 569 aaPredicted RBP12.81□□□□□ -0.36
RFC1-210ENST00000505077 SLX4Q8IY92 1834 aa12.81□□□□□ -0.36
RFC1-210ENST00000505077 LTBP1Q14766 1721 aa12.8□□□□□ -0.36
RFC1-210ENST00000505077 CEP85Q6P2H3 762 aa12.8□□□□□ -0.36
RFC1-210ENST00000505077 SYNE4Q8N205 404 aa12.8□□□□□ -0.36
RFC1-210ENST00000505077 ANKRD44Q8N8A2 993 aa12.8□□□□□ -0.36
RFC1-210ENST00000505077 TTLL11Q8NHH1 800 aa12.8□□□□□ -0.36
RFC1-210ENST00000505077 CD2APQ9Y5K6 639 aa12.8□□□□□ -0.36
RFC1-210ENST00000505077 FER1L6Q2WGJ9 1857 aa12.79□□□□□ -0.36
RFC1-210ENST00000505077 EPHA10Q5JZY3 1008 aa12.79□□□□□ -0.36
RFC1-210ENST00000505077 LMBR1LQ6UX01 489 aa12.79□□□□□ -0.36
RFC1-210ENST00000505077 JARID2Q92833 1246 aaPredicted RBP12.79□□□□□ -0.36
RFC1-210ENST00000505077 RPGRQ92834 1020 aaKnown RBP12.79□□□□□ -0.36
RFC1-210ENST00000505077 CDC5LQ99459 802 aaKnown RBP12.79□□□□□ -0.36
RFC1-210ENST00000505077 C1orf115Q9H7X2 142 aa12.79□□□□□ -0.36
RFC1-210ENST00000505077 SRGAP3O43295 1099 aa12.78□□□□□ -0.36
RFC1-210ENST00000505077 NPR1P16066 1061 aa12.78□□□□□ -0.36
RFC1-210ENST00000505077 HOXA10P31260 410 aaPredicted RBP12.78□□□□□ -0.36
RFC1-210ENST00000505077 TGFB2P61812 414 aa12.78□□□□□ -0.36
RFC1-210ENST00000505077 ATP8B2P98198 1209 aa12.78□□□□□ -0.36
RFC1-210ENST00000505077 IFIT5Q13325 482 aaKnown RBP12.78□□□□□ -0.36
RFC1-210ENST00000505077 CCDC57Q2TAC2 916 aa12.78□□□□□ -0.36
RFC1-210ENST00000505077 FAM161AQ3B820 660 aa12.78□□□□□ -0.36
RFC1-210ENST00000505077 DDX46Q7L014 1031 aaKnown RBP12.78□□□□□ -0.36
RFC1-210ENST00000505077 SSH3Q8TE77 659 aa12.78□□□□□ -0.36
RFC1-210ENST00000505077 U3KPZ7 1027 aaPredicted RBP12.78□□□□□ -0.36
RFC1-210ENST00000505077 SRCAPQ6ZRS2 3230 aa12.77□□□□□ -0.36
RFC1-210ENST00000505077 ANKRD18BA2A2Z9 1011 aa12.77□□□□□ -0.37
RFC1-210ENST00000505077 SPDYE4A6NLX3 237 aa12.77□□□□□ -0.37
RFC1-210ENST00000505077 H0YIN7 160 aa12.77□□□□□ -0.37
RFC1-210ENST00000505077 SRGNP10124 158 aa12.77□□□□□ -0.37
RFC1-210ENST00000505077 HDAC1Q13547 482 aaPredicted RBP12.77□□□□□ -0.37
RFC1-210ENST00000505077 POLA2Q14181 598 aa12.77□□□□□ -0.37
RFC1-210ENST00000505077 STYK1Q6J9G0 422 aa12.77□□□□□ -0.37
RFC1-210ENST00000505077 TMC4Q7Z404 712 aa12.77□□□□□ -0.37
RFC1-210ENST00000505077 RBM17Q96I25 401 aaKnown RBP12.77□□□□□ -0.37
RFC1-210ENST00000505077 CRAMP1Q96RY5 1269 aa12.77□□□□□ -0.37
RFC1-210ENST00000505077 GREM2Q9H772 168 aa12.77□□□□□ -0.37
RFC1-210ENST00000505077 ZNF219Q9P2Y4 722 aaPredicted RBP12.77□□□□□ -0.37
RFC1-210ENST00000505077 CHMP3Q9Y3E7 222 aa12.77□□□□□ -0.37
RFC1-210ENST00000505077 COL4A1P02462 1669 aa12.77□□□□□ -0.37
RFC1-210ENST00000505077 CCDC88AQ3V6T2 1871 aa12.76□□□□□ -0.37
RFC1-210ENST00000505077 CHD4Q14839 1912 aa12.76□□□□□ -0.37
RFC1-210ENST00000505077 PRKCSHP14314 528 aaPredicted RBP12.76□□□□□ -0.37
RFC1-210ENST00000505077 ITGA6P23229 1130 aa12.76□□□□□ -0.37
RFC1-210ENST00000505077 ALDH1B1P30837 517 aa12.76□□□□□ -0.37
RFC1-210ENST00000505077 VASPP50552 380 aaPredicted RBP12.76□□□□□ -0.37
RFC1-210ENST00000505077 C3orf67Q6ZVT6 689 aa12.76□□□□□ -0.37
RFC1-210ENST00000505077 MASTLQ96GX5 879 aa12.76□□□□□ -0.37
RFC1-210ENST00000505077 COPRSQ9NQ92 184 aa12.76□□□□□ -0.37
RFC1-210ENST00000505077 PCDHB15Q9Y5E8 787 aa12.76□□□□□ -0.37
RFC1-210ENST00000505077 DICER1Q9UPY3 1922 aaKnown RBP12.76□□□□□ -0.37
RFC1-210ENST00000505077 GOLGB1Q14789 3259 aaKnown RBP12.75□□□□□ -0.37
RFC1-210ENST00000505077 PNMA6EA0A0J9YXQ4 647 aa12.75□□□□□ -0.37
RFC1-210ENST00000505077 CIAO1O76071 339 aa12.75□□□□□ -0.37
RFC1-210ENST00000505077 HSP90AB4PQ58FF6 505 aa12.75□□□□□ -0.37
RFC1-210ENST00000505077 C2CD5Q86YS7 1000 aa12.75□□□□□ -0.37
RFC1-210ENST00000505077 CCDC24Q8N4L8 307 aa12.75□□□□□ -0.37
RFC1-210ENST00000505077 RWDD1Q9H446 243 aaPredicted RBP12.75□□□□□ -0.37
RFC1-210ENST00000505077 AK9Q5TCS8 1911 aa12.74□□□□□ -0.37
RFC1-210ENST00000505077 IGHMBP2P38935 993 aaKnown RBP12.74□□□□□ -0.37
RFC1-210ENST00000505077 RFX5P48382 616 aaPredicted RBP12.74□□□□□ -0.37
RFC1-210ENST00000505077 GRAPQ13588 217 aa12.74□□□□□ -0.37
RFC1-210ENST00000505077 TAF7LQ5H9L4 462 aa12.74□□□□□ -0.37
RFC1-210ENST00000505077 ANKRD18AQ8IVF6 992 aa12.74□□□□□ -0.37
RFC1-210ENST00000505077 SIRT2Q8IXJ6 389 aa12.74□□□□□ -0.37
RFC1-210ENST00000505077 GRAPLQ8TC17 118 aaPredicted RBP12.74□□□□□ -0.37
RFC1-210ENST00000505077 CNKSR1Q969H4 720 aa12.74□□□□□ -0.37
RFC1-210ENST00000505077 PPP1R1BQ9UD71 204 aaPredicted RBP12.74□□□□□ -0.37
RFC1-210ENST00000505077 TAOK2Q9UL54 1235 aa12.74□□□□□ -0.37
RFC1-210ENST00000505077 NOP58Q9Y2X3 529 aaKnown RBP12.74□□□□□ -0.37
RFC1-210ENST00000505077 PSME4Q14997 1843 aa12.74□□□□□ -0.37
RFC1-210ENST00000505077 DCAF8L1A6NGE4 600 aa12.73□□□□□ -0.37
RFC1-210ENST00000505077 BBOX1O75936 387 aa12.73□□□□□ -0.37
RFC1-210ENST00000505077 PTPN12Q05209 780 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms