RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 ZNRF3Q9ULT6 936 aa9.14□□□□□ -0.95
NPIPB3-203ENST00000504841 ABCC4O15439 1325 aa9.13□□□□□ -0.95
NPIPB3-203ENST00000504841 HTATSF1O43719 755 aaKnown RBP9.13□□□□□ -0.95
NPIPB3-203ENST00000504841 PPP2R1AP30153 589 aa9.13□□□□□ -0.95
NPIPB3-203ENST00000504841 DPP8Q6V1X1 898 aaPredicted RBP9.13□□□□□ -0.95
NPIPB3-203ENST00000504841 PPP1R42Q7Z4L9 355 aa9.13□□□□□ -0.95
NPIPB3-203ENST00000504841 SUPT20HQ8NEM7 779 aa9.13□□□□□ -0.95
NPIPB3-203ENST00000504841 TRPM4Q8TD43 1214 aa9.13□□□□□ -0.95
NPIPB3-203ENST00000504841 NLRP3Q96P20 1036 aa9.13□□□□□ -0.95
NPIPB3-203ENST00000504841 ATP6V0A2Q9Y487 856 aa9.13□□□□□ -0.95
NPIPB3-203ENST00000504841 KDM3BQ7LBC6 1761 aa9.13□□□□□ -0.95
NPIPB3-203ENST00000504841 CASP8AP2Q9UKL3 1982 aa9.13□□□□□ -0.95
NPIPB3-203ENST00000504841 SHTN1A0MZ66 631 aa9.12□□□□□ -0.95
NPIPB3-203ENST00000504841 CA12O43570 354 aa9.12□□□□□ -0.95
NPIPB3-203ENST00000504841 BRPF1P55201 1214 aaPredicted RBP9.12□□□□□ -0.95
NPIPB3-203ENST00000504841 EIF4A1P60842 406 aaKnown RBP9.12□□□□□ -0.95
NPIPB3-203ENST00000504841 PARP10Q53GL7 1025 aa9.12□□□□□ -0.95
NPIPB3-203ENST00000504841 GIGYF2Q6Y7W6 1299 aaKnown RBP9.12□□□□□ -0.95
NPIPB3-203ENST00000504841 ZNF34Q8IZ26 560 aa9.12□□□□□ -0.95
NPIPB3-203ENST00000504841 MPNDQ8N594 471 aa9.12□□□□□ -0.95
NPIPB3-203ENST00000504841 PNISRQ8TF01 805 aaKnown RBP9.12□□□□□ -0.95
NPIPB3-203ENST00000504841 ZNF428Q96B54 188 aa9.12□□□□□ -0.95
NPIPB3-203ENST00000504841 ANXA1P04083 346 aa9.11□□□□□ -0.95
NPIPB3-203ENST00000504841 RGS19P49795 217 aa9.11□□□□□ -0.95
NPIPB3-203ENST00000504841 HIRAP54198 1017 aaPredicted RBP9.11□□□□□ -0.95
NPIPB3-203ENST00000504841 HUNKP57058 714 aa9.11□□□□□ -0.95
NPIPB3-203ENST00000504841 DLK2Q6UY11 383 aa9.11□□□□□ -0.95
NPIPB3-203ENST00000504841 CDC37L1Q7L3B6 337 aa9.11□□□□□ -0.95
NPIPB3-203ENST00000504841 ZIC5Q96T25 663 aa9.11□□□□□ -0.95
NPIPB3-203ENST00000504841 UTP14AQ9BVJ6 771 aaKnown RBP9.11□□□□□ -0.95
NPIPB3-203ENST00000504841 DLG5Q8TDM6 1919 aa9.11□□□□□ -0.95
NPIPB3-203ENST00000504841 HCLS1P14317 486 aaPredicted RBP9.1□□□□□ -0.95
NPIPB3-203ENST00000504841 EIF2S2P20042 333 aaKnown RBP9.1□□□□□ -0.95
NPIPB3-203ENST00000504841 SOX10P56693 466 aa9.1□□□□□ -0.95
NPIPB3-203ENST00000504841 KIAA2012Q0VF49 1180 aa9.1□□□□□ -0.95
NPIPB3-203ENST00000504841 NOGQ13253 232 aa9.1□□□□□ -0.95
NPIPB3-203ENST00000504841 TNIP1Q15025 636 aa9.1□□□□□ -0.95
NPIPB3-203ENST00000504841 USP48Q86UV5 1035 aa9.1□□□□□ -0.95
NPIPB3-203ENST00000504841 MICALL2Q8IY33 904 aa9.1□□□□□ -0.95
NPIPB3-203ENST00000504841 NECTIN2Q92692 538 aa9.1□□□□□ -0.95
NPIPB3-203ENST00000504841 CNOT7Q9UIV1 285 aaKnown RBP9.1□□□□□ -0.95
NPIPB3-203ENST00000504841 CDHR2Q9BYE9 1310 aa9.09□□□□□ -0.95
NPIPB3-203ENST00000504841 SPDYE2BA6NHP3 402 aa9.09□□□□□ -0.95
NPIPB3-203ENST00000504841 H7C1D1 291 aa9.09□□□□□ -0.95
NPIPB3-203ENST00000504841 SPDYE6P0CI01 402 aa9.09□□□□□ -0.95
NPIPB3-203ENST00000504841 AIMP1Q12904 312 aaKnown RBP9.09□□□□□ -0.95
NPIPB3-203ENST00000504841 PROSER3Q2NL68 480 aa9.09□□□□□ -0.95
NPIPB3-203ENST00000504841 SPDYE2Q495Y8 402 aa9.09□□□□□ -0.95
NPIPB3-203ENST00000504841 TBC1D10BQ4KMP7 808 aaPredicted RBP9.09□□□□□ -0.95
NPIPB3-203ENST00000504841 RBM26Q5T8P6 1007 aaKnown RBP9.09□□□□□ -0.95
NPIPB3-203ENST00000504841 DDX46Q7L014 1031 aaKnown RBP9.09□□□□□ -0.95
NPIPB3-203ENST00000504841 SAMD7Q7Z3H4 446 aa9.09□□□□□ -0.95
NPIPB3-203ENST00000504841 SP8Q8IXZ3 490 aa9.09□□□□□ -0.95
NPIPB3-203ENST00000504841 HHIPL1Q96JK4 782 aa9.09□□□□□ -0.95
NPIPB3-203ENST00000504841 RTFDC1Q9BY42 306 aaPredicted RBP9.09□□□□□ -0.95
NPIPB3-203ENST00000504841 VPS33BQ9H267 617 aa9.09□□□□□ -0.95
NPIPB3-203ENST00000504841 TSPYL4Q9UJ04 414 aa9.09□□□□□ -0.95
NPIPB3-203ENST00000504841 LAMB2P55268 1798 aa9.09□□□□□ -0.95
NPIPB3-203ENST00000504841 ERBB4Q15303 1308 aa9.08□□□□□ -0.96
NPIPB3-203ENST00000504841 MAPK8IP3Q9UPT6 1336 aa9.08□□□□□ -0.96
NPIPB3-203ENST00000504841 YDJCA8MPS7 323 aa9.08□□□□□ -0.96
NPIPB3-203ENST00000504841 ADM5C9JUS6 153 aa9.08□□□□□ -0.96
NPIPB3-203ENST00000504841 RIMBP2O15034 1052 aa9.08□□□□□ -0.96
NPIPB3-203ENST00000504841 BBOX1O75936 387 aa9.08□□□□□ -0.96
NPIPB3-203ENST00000504841 GRAPQ13588 217 aa9.08□□□□□ -0.96
NPIPB3-203ENST00000504841 NFE2L2Q16236 605 aa9.08□□□□□ -0.96
NPIPB3-203ENST00000504841 KRT26Q7Z3Y9 468 aa9.08□□□□□ -0.96
NPIPB3-203ENST00000504841 GRAPLQ8TC17 118 aaPredicted RBP9.08□□□□□ -0.96
NPIPB3-203ENST00000504841 ZC3H15Q8WU90 426 aaKnown RBP9.08□□□□□ -0.96
NPIPB3-203ENST00000504841 DBNDD1Q9H9R9 158 aa9.08□□□□□ -0.96
NPIPB3-203ENST00000504841 PGAP2Q9UHJ9 254 aa9.08□□□□□ -0.96
NPIPB3-203ENST00000504841 DUOX1Q9NRD9 1551 aa9.07□□□□□ -0.96
NPIPB3-203ENST00000504841 ANKRD36CQ5JPF3 1778 aa9.07□□□□□ -0.96
NPIPB3-203ENST00000504841 EGFRP00533 1210 aa9.07□□□□□ -0.96
NPIPB3-203ENST00000504841 PDIA6Q15084 440 aa9.07□□□□□ -0.96
NPIPB3-203ENST00000504841 SLC10A5Q5PT55 438 aa9.07□□□□□ -0.96
NPIPB3-203ENST00000504841 RGMBQ6NW40 437 aa9.07□□□□□ -0.96
NPIPB3-203ENST00000504841 NLRP10Q86W26 655 aa9.07□□□□□ -0.96
NPIPB3-203ENST00000504841 XAGE3Q8WTP9 111 aa9.07□□□□□ -0.96
NPIPB3-203ENST00000504841 GBA2Q9HCG7 927 aaPredicted RBP9.07□□□□□ -0.96
NPIPB3-203ENST00000504841 TRMT112Q9UI30 125 aaKnown RBP9.07□□□□□ -0.96
NPIPB3-203ENST00000504841 SH3TC1Q8TE82 1336 aa9.06□□□□□ -0.96
NPIPB3-203ENST00000504841 TAF1P21675 1872 aa9.06□□□□□ -0.96
NPIPB3-203ENST00000504841 FAM155AB1AL88 458 aaPredicted RBP9.06□□□□□ -0.96
NPIPB3-203ENST00000504841 C6orf229H3BNL8 230 aa9.06□□□□□ -0.96
NPIPB3-203ENST00000504841 PSMD14O00487 310 aa9.06□□□□□ -0.96
NPIPB3-203ENST00000504841 ZNF157P51786 506 aaPredicted RBP9.06□□□□□ -0.96
NPIPB3-203ENST00000504841 KIF23Q02241 960 aaPredicted RBP9.06□□□□□ -0.96
NPIPB3-203ENST00000504841 WASHC4Q2M389 1173 aa9.06□□□□□ -0.96
NPIPB3-203ENST00000504841 HSP90AB3PQ58FF7 597 aa9.06□□□□□ -0.96
NPIPB3-203ENST00000504841 COPS6Q7L5N1 327 aa9.06□□□□□ -0.96
NPIPB3-203ENST00000504841 LRP10Q7Z4F1 713 aa9.06□□□□□ -0.96
NPIPB3-203ENST00000504841 C2orf69Q8N8R5 385 aa9.06□□□□□ -0.96
NPIPB3-203ENST00000504841 DCPSQ96C86 337 aaKnown RBP9.06□□□□□ -0.96
NPIPB3-203ENST00000504841 PLEKHF1Q96S99 279 aa9.06□□□□□ -0.96
NPIPB3-203ENST00000504841 GGA3Q9NZ52 723 aa9.06□□□□□ -0.96
NPIPB3-203ENST00000504841 NSFL1CQ9UNZ2 370 aaKnown RBP9.06□□□□□ -0.96
NPIPB3-203ENST00000504841 ECE2O60344 883 aa9.05□□□□□ -0.96
NPIPB3-203ENST00000504841 TRPA1O75762 1119 aa9.05□□□□□ -0.96
NPIPB3-203ENST00000504841 DOK7Q18PE1 504 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms