RNA–Protein interactions for RNA: ENST00000504672.5

PDGFC-204, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-204ENST00000504672 ZNF428Q96B54 188 aa12.08□□□□□ -0.48
PDGFC-204ENST00000504672 GBA2Q9HCG7 927 aaPredicted RBP12.08□□□□□ -0.48
PDGFC-204ENST00000504672 TIMELESSQ9UNS1 1208 aa12.08□□□□□ -0.48
PDGFC-204ENST00000504672 HPS5Q9UPZ3 1129 aa12.08□□□□□ -0.48
PDGFC-204ENST00000504672 KIF7Q2M1P5 1343 aa12.08□□□□□ -0.48
PDGFC-204ENST00000504672 MAP3K15Q6ZN16 1313 aa12.08□□□□□ -0.48
PDGFC-204ENST00000504672 YDJCA8MPS7 323 aa12.07□□□□□ -0.48
PDGFC-204ENST00000504672 PER1O15534 1290 aaPredicted RBP12.07□□□□□ -0.48
PDGFC-204ENST00000504672 KIF6Q6ZMV9 814 aa12.07□□□□□ -0.48
PDGFC-204ENST00000504672 CTU1Q7Z7A3 348 aaKnown RBP12.07□□□□□ -0.48
PDGFC-204ENST00000504672 ZNF34Q8IZ26 560 aa12.07□□□□□ -0.48
PDGFC-204ENST00000504672 MPNDQ8N594 471 aa12.07□□□□□ -0.48
PDGFC-204ENST00000504672 SUPT20HQ8NEM7 779 aa12.07□□□□□ -0.48
PDGFC-204ENST00000504672 CCDC102AQ96A19 550 aa12.07□□□□□ -0.48
PDGFC-204ENST00000504672 NLRP3Q96P20 1036 aa12.07□□□□□ -0.48
PDGFC-204ENST00000504672 RSPH6AQ9H0K4 717 aa12.07□□□□□ -0.48
PDGFC-204ENST00000504672 SAGE1Q9NXZ1 904 aa12.07□□□□□ -0.48
PDGFC-204ENST00000504672 NTSR2O95665 410 aa12.06□□□□□ -0.48
PDGFC-204ENST00000504672 TAF7Q15545 349 aaPredicted RBP12.06□□□□□ -0.48
PDGFC-204ENST00000504672 RTFDC1Q9BY42 306 aaPredicted RBP12.06□□□□□ -0.48
PDGFC-204ENST00000504672 VPS33BQ9H267 617 aa12.06□□□□□ -0.48
PDGFC-204ENST00000504672 KCNQ5Q9NR82 932 aa12.06□□□□□ -0.48
PDGFC-204ENST00000504672 ABCC4O15439 1325 aa12.06□□□□□ -0.48
PDGFC-204ENST00000504672 BCORQ6W2J9 1755 aa12.05□□□□□ -0.48
PDGFC-204ENST00000504672 RIMBP2O15034 1052 aa12.05□□□□□ -0.48
PDGFC-204ENST00000504672 HCLS1P14317 486 aaPredicted RBP12.05□□□□□ -0.48
PDGFC-204ENST00000504672 KIAA2012Q0VF49 1180 aa12.05□□□□□ -0.48
PDGFC-204ENST00000504672 SP8Q8IXZ3 490 aa12.05□□□□□ -0.48
PDGFC-204ENST00000504672 THUMPD2Q9BTF0 503 aaKnown RBP12.05□□□□□ -0.48
PDGFC-204ENST00000504672 ASTN2O75129 1339 aaPredicted RBP12.05□□□□□ -0.48
PDGFC-204ENST00000504672 PSMD14O00487 310 aa12.04□□□□□ -0.48
PDGFC-204ENST00000504672 BBOX1O75936 387 aa12.04□□□□□ -0.48
PDGFC-204ENST00000504672 TBC1D8O95759 1140 aa12.04□□□□□ -0.48
PDGFC-204ENST00000504672 U2AF1L5P0DN76 240 aaPredicted RBP12.04□□□□□ -0.48
PDGFC-204ENST00000504672 U2AF1Q01081 240 aaKnown RBP eCLIP12.04□□□□□ -0.48
PDGFC-204ENST00000504672 DCPSQ96C86 337 aaKnown RBP12.04□□□□□ -0.48
PDGFC-204ENST00000504672 CLSPNQ9HAW4 1339 aa12.04□□□□□ -0.48
PDGFC-204ENST00000504672 TRPM7Q96QT4 1865 aa12.04□□□□□ -0.48
PDGFC-204ENST00000504672 DOK7Q18PE1 504 aa12.03□□□□□ -0.48
PDGFC-204ENST00000504672 SLC10A5Q5PT55 438 aa12.03□□□□□ -0.48
PDGFC-204ENST00000504672 PPP1R42Q7Z4L9 355 aa12.03□□□□□ -0.48
PDGFC-204ENST00000504672 UTP14AQ9BVJ6 771 aaKnown RBP12.03□□□□□ -0.48
PDGFC-204ENST00000504672 DBNDD1Q9H9R9 158 aa12.03□□□□□ -0.48
PDGFC-204ENST00000504672 HDAC9Q9UKV0 1011 aa12.03□□□□□ -0.48
PDGFC-204ENST00000504672 SLC10A3P09131 477 aa12.02□□□□□ -0.49
PDGFC-204ENST00000504672 SCAF8Q9UPN6 1271 aaKnown RBP12.02□□□□□ -0.49
PDGFC-204ENST00000504672 CDHR2Q9BYE9 1310 aa12.02□□□□□ -0.49
PDGFC-204ENST00000504672 RIC1Q4ADV7 1423 aa12.02□□□□□ -0.49
PDGFC-204ENST00000504672 COL3A1P02461 1466 aaPredicted RBP12.02□□□□□ -0.49
PDGFC-204ENST00000504672 SIPA1L3O60292 1781 aaPredicted RBP12.01□□□□□ -0.49
PDGFC-204ENST00000504672 ANXA1P04083 346 aa12.01□□□□□ -0.49
PDGFC-204ENST00000504672 HABP4Q5JVS0 413 aaKnown RBP12.01□□□□□ -0.49
PDGFC-204ENST00000504672 GIGYF2Q6Y7W6 1299 aaKnown RBP12.01□□□□□ -0.49
PDGFC-204ENST00000504672 MOB2Q70IA6 237 aa12.01□□□□□ -0.49
PDGFC-204ENST00000504672 DDX46Q7L014 1031 aaKnown RBP12.01□□□□□ -0.49
PDGFC-204ENST00000504672 ZNF296Q8WUU4 475 aaPredicted RBP12.01□□□□□ -0.49
PDGFC-204ENST00000504672 DPF2Q92785 391 aa12.01□□□□□ -0.49
PDGFC-204ENST00000504672 C6orf229H3BNL8 230 aa12□□□□□ -0.49
PDGFC-204ENST00000504672 EIF4A1P60842 406 aaKnown RBP12□□□□□ -0.49
PDGFC-204ENST00000504672 WASHC4Q2M389 1173 aa12□□□□□ -0.49
PDGFC-204ENST00000504672 SULF1Q8IWU6 871 aa12□□□□□ -0.49
PDGFC-204ENST00000504672 CDCA5Q96FF9 252 aa12□□□□□ -0.49
PDGFC-204ENST00000504672 NSFL1CQ9UNZ2 370 aaKnown RBP12□□□□□ -0.49
PDGFC-204ENST00000504672 UBE2Q2LH0YL09 131 aa11.99□□□□□ -0.49
PDGFC-204ENST00000504672 EIF2S2P20042 333 aaKnown RBP11.99□□□□□ -0.49
PDGFC-204ENST00000504672 MKRN3Q13064 507 aaKnown RBP11.99□□□□□ -0.49
PDGFC-204ENST00000504672 PARP10Q53GL7 1025 aa11.99□□□□□ -0.49
PDGFC-204ENST00000504672 PRAMEF18Q5VWM3 479 aa11.99□□□□□ -0.49
PDGFC-204ENST00000504672 RASAL3Q86YV0 1011 aa11.99□□□□□ -0.49
PDGFC-204ENST00000504672 CFAP53Q96M91 514 aa11.99□□□□□ -0.49
PDGFC-204ENST00000504672 GGA3Q9NZ52 723 aa11.99□□□□□ -0.49
PDGFC-204ENST00000504672 NUDCQ9Y266 331 aa11.99□□□□□ -0.49
PDGFC-204ENST00000504672 IBTKQ9P2D0 1353 aaPredicted RBP11.98□□□□□ -0.49
PDGFC-204ENST00000504672 HTATSF1O43719 755 aaKnown RBP11.98□□□□□ -0.49
PDGFC-204ENST00000504672 AIMP1Q12904 312 aaKnown RBP11.98□□□□□ -0.49
PDGFC-204ENST00000504672 GRAPQ13588 217 aa11.98□□□□□ -0.49
PDGFC-204ENST00000504672 SCARF1Q14162 830 aa11.98□□□□□ -0.49
PDGFC-204ENST00000504672 PROSER3Q2NL68 480 aa11.98□□□□□ -0.49
PDGFC-204ENST00000504672 KIF4BQ2VIQ3 1234 aa11.98□□□□□ -0.49
PDGFC-204ENST00000504672 GRAPLQ8TC17 118 aaPredicted RBP11.98□□□□□ -0.49
PDGFC-204ENST00000504672 R3HDMLQ9H3Y0 253 aa11.98□□□□□ -0.49
PDGFC-204ENST00000504672 POLLQ9UGP5 575 aa11.98□□□□□ -0.49
PDGFC-204ENST00000504672 TRMT112Q9UI30 125 aaKnown RBP11.98□□□□□ -0.49
PDGFC-204ENST00000504672 RTL9Q8NET4 1388 aa11.97□□□□□ -0.49
PDGFC-204ENST00000504672 ECE2O60344 883 aa11.97□□□□□ -0.49
PDGFC-204ENST00000504672 GPSM2P81274 684 aa11.97□□□□□ -0.49
PDGFC-204ENST00000504672 PKN2Q16513 984 aaKnown RBP11.97□□□□□ -0.49
PDGFC-204ENST00000504672 ANGEL2Q5VTE6 544 aaKnown RBP11.97□□□□□ -0.49
PDGFC-204ENST00000504672 NLRP10Q86W26 655 aa11.97□□□□□ -0.49
PDGFC-204ENST00000504672 NECTIN2Q92692 538 aa11.97□□□□□ -0.49
PDGFC-204ENST00000504672 GCC1Q96CN9 775 aa11.97□□□□□ -0.49
PDGFC-204ENST00000504672 GPR25O00155 361 aa11.96□□□□□ -0.49
PDGFC-204ENST00000504672 PDIA6Q15084 440 aa11.96□□□□□ -0.49
PDGFC-204ENST00000504672 CELF1Q92879 486 aaKnown RBP11.96□□□□□ -0.49
PDGFC-204ENST00000504672 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.96□□□□□ -0.49
PDGFC-204ENST00000504672 POTEFA5A3E0 1075 aa11.95□□□□□ -0.5
PDGFC-204ENST00000504672 RPS12P25398 132 aaKnown RBP11.95□□□□□ -0.5
PDGFC-204ENST00000504672 FBXO46Q6PJ61 603 aaPredicted RBP11.95□□□□□ -0.5
PDGFC-204ENST00000504672 COPS6Q7L5N1 327 aa11.95□□□□□ -0.5
PDGFC-204ENST00000504672 LRP10Q7Z4F1 713 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms