RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 CCDC85AQ96PX6 553 aaPredicted RBP17.5■□□□□ 0.39
DDR1-253ENST00000504651 BICC1Q9H694 974 aaKnown RBP17.5■□□□□ 0.39
DDR1-253ENST00000504651 CHMP3Q9Y3E7 222 aa17.5■□□□□ 0.39
DDR1-253ENST00000504651 KLRG2A4D1S0 409 aaPredicted RBP17.49■□□□□ 0.39
DDR1-253ENST00000504651 SRGNP10124 158 aa17.49■□□□□ 0.39
DDR1-253ENST00000504651 IRX6P78412 446 aaPredicted RBP17.49■□□□□ 0.39
DDR1-253ENST00000504651 FOXO4P98177 505 aa17.49■□□□□ 0.39
DDR1-253ENST00000504651 SF3B3Q15393 1217 aaKnown RBP17.49■□□□□ 0.39
DDR1-253ENST00000504651 CRY2Q49AN0 593 aa17.49■□□□□ 0.39
DDR1-253ENST00000504651 NLGN2Q8NFZ4 835 aa17.49■□□□□ 0.39
DDR1-253ENST00000504651 KAZALD1Q96I82 304 aa17.49■□□□□ 0.39
DDR1-253ENST00000504651 C1orf115Q9H7X2 142 aa17.49■□□□□ 0.39
DDR1-253ENST00000504651 TAF1P21675 1872 aa17.49■□□□□ 0.39
DDR1-253ENST00000504651 NPR1P16066 1061 aa17.48■□□□□ 0.39
DDR1-253ENST00000504651 DPEP1P16444 411 aa17.48■□□□□ 0.39
DDR1-253ENST00000504651 LMBR1LQ6UX01 489 aa17.48■□□□□ 0.39
DDR1-253ENST00000504651 TTLL11Q8NHH1 800 aa17.48■□□□□ 0.39
DDR1-253ENST00000504651 ZNF622Q969S3 477 aaKnown RBP eCLIP17.48■□□□□ 0.39
DDR1-253ENST00000504651 MASTLQ96GX5 879 aa17.48■□□□□ 0.39
DDR1-253ENST00000504651 A0A0G2JLW4 131 aa17.47■□□□□ 0.39
DDR1-253ENST00000504651 FAM161AQ3B820 660 aa17.47■□□□□ 0.39
DDR1-253ENST00000504651 STYK1Q6J9G0 422 aa17.47■□□□□ 0.39
DDR1-253ENST00000504651 DDX46Q7L014 1031 aaKnown RBP17.47■□□□□ 0.39
DDR1-253ENST00000504651 ANKRD44Q8N8A2 993 aa17.47■□□□□ 0.39
DDR1-253ENST00000504651 RBM17Q96I25 401 aaKnown RBP17.47■□□□□ 0.39
DDR1-253ENST00000504651 SYT17Q9BSW7 474 aa17.47■□□□□ 0.39
DDR1-253ENST00000504651 RTL9Q8NET4 1388 aa17.47■□□□□ 0.39
DDR1-253ENST00000504651 COL4A1P02462 1669 aa17.47■□□□□ 0.39
DDR1-253ENST00000504651 CSF1RP07333 972 aa17.46■□□□□ 0.39
DDR1-253ENST00000504651 RABL6Q3YEC7 729 aaPredicted RBP17.46■□□□□ 0.39
DDR1-253ENST00000504651 GREM2Q9H772 168 aa17.46■□□□□ 0.39
DDR1-253ENST00000504651 ZBTB40Q9NUA8 1239 aa17.46■□□□□ 0.39
DDR1-253ENST00000504651 ARFGEF1Q9Y6D6 1849 aa17.44■□□□□ 0.38
DDR1-253ENST00000504651 LRRC37AA6NMS7 1700 aa17.44■□□□□ 0.38
DDR1-253ENST00000504651 ANKRD18BA2A2Z9 1011 aa17.44■□□□□ 0.38
DDR1-253ENST00000504651 NEFLP07196 543 aa17.44■□□□□ 0.38
DDR1-253ENST00000504651 ITGA6P23229 1130 aa17.44■□□□□ 0.38
DDR1-253ENST00000504651 HOXA10P31260 410 aaPredicted RBP17.44■□□□□ 0.38
DDR1-253ENST00000504651 IFIT5Q13325 482 aaKnown RBP17.44■□□□□ 0.38
DDR1-253ENST00000504651 GRAPQ13588 217 aa17.44■□□□□ 0.38
DDR1-253ENST00000504651 CCDC57Q2TAC2 916 aa17.44■□□□□ 0.38
DDR1-253ENST00000504651 EXOC6Q8TAG9 804 aa17.44■□□□□ 0.38
DDR1-253ENST00000504651 GRAPLQ8TC17 118 aaPredicted RBP17.44■□□□□ 0.38
DDR1-253ENST00000504651 CNKSR1Q969H4 720 aa17.44■□□□□ 0.38
DDR1-253ENST00000504651 CRAMP1Q96RY5 1269 aa17.44■□□□□ 0.38
DDR1-253ENST00000504651 SEC31BQ9NQW1 1179 aa17.44■□□□□ 0.38
DDR1-253ENST00000504651 WWC3Q9ULE0 1092 aa17.44■□□□□ 0.38
DDR1-253ENST00000504651 SLX4Q8IY92 1834 aa17.44■□□□□ 0.38
DDR1-253ENST00000504651 KCNA3P22001 575 aa17.43■□□□□ 0.38
DDR1-253ENST00000504651 ALDH1B1P30837 517 aa17.43■□□□□ 0.38
DDR1-253ENST00000504651 TAF7LQ5H9L4 462 aa17.43■□□□□ 0.38
DDR1-253ENST00000504651 CDC5LQ99459 802 aaKnown RBP17.43■□□□□ 0.38
DDR1-253ENST00000504651 PIM2Q9P1W9 311 aa17.43■□□□□ 0.38
DDR1-253ENST00000504651 A0A1B0GUL6 1792 aa17.43■□□□□ 0.38
DDR1-253ENST00000504651 MTX1Q13505 466 aa17.42■□□□□ 0.38
DDR1-253ENST00000504651 PRPF40BQ6NWY9 871 aaKnown RBP17.42■□□□□ 0.38
DDR1-253ENST00000504651 CEP85Q6P2H3 762 aa17.42■□□□□ 0.38
DDR1-253ENST00000504651 ANKRD18AQ8IVF6 992 aa17.42■□□□□ 0.38
DDR1-253ENST00000504651 TTLL6Q8N841 843 aa17.42■□□□□ 0.38
DDR1-253ENST00000504651 CELF1Q92879 486 aaKnown RBP17.42■□□□□ 0.38
DDR1-253ENST00000504651 PPEF1O14829 653 aaPredicted RBP17.41■□□□□ 0.38
DDR1-253ENST00000504651 SRGAP3O43295 1099 aa17.41■□□□□ 0.38
DDR1-253ENST00000504651 IGHMBP2P38935 993 aaKnown RBP17.41■□□□□ 0.38
DDR1-253ENST00000504651 PNMA6EA0A0J9YXQ4 647 aa17.4■□□□□ 0.38
DDR1-253ENST00000504651 AAMPQ13685 434 aa17.4■□□□□ 0.38
DDR1-253ENST00000504651 DALRD3Q5D0E6 543 aaKnown RBP17.4■□□□□ 0.38
DDR1-253ENST00000504651 BCS1LQ9Y276 419 aa17.4■□□□□ 0.38
DDR1-253ENST00000504651 RPS8P62241 208 aaKnown RBP17.39■□□□□ 0.37
DDR1-253ENST00000504651 ATP8B2P98198 1209 aa17.39■□□□□ 0.37
DDR1-253ENST00000504651 ZNF594Q96JF6 807 aaPredicted RBP17.39■□□□□ 0.37
DDR1-253ENST00000504651 RFX5P48382 616 aaPredicted RBP17.38■□□□□ 0.37
DDR1-253ENST00000504651 TMC4Q7Z404 712 aa17.38■□□□□ 0.37
DDR1-253ENST00000504651 RPAP2Q8IXW5 612 aaPredicted RBP17.38■□□□□ 0.37
DDR1-253ENST00000504651 PELP1Q8IZL8 1130 aaKnown RBP17.38■□□□□ 0.37
DDR1-253ENST00000504651 MPHOSPH8Q99549 860 aa17.38■□□□□ 0.37
DDR1-253ENST00000504651 ZNF219Q9P2Y4 722 aaPredicted RBP17.38■□□□□ 0.37
DDR1-253ENST00000504651 HMMRO75330 724 aa17.37■□□□□ 0.37
DDR1-253ENST00000504651 BBOX1O75936 387 aa17.37■□□□□ 0.37
DDR1-253ENST00000504651 KLHDC4Q8TBB5 520 aa17.37■□□□□ 0.37
DDR1-253ENST00000504651 PTPN12Q05209 780 aaKnown RBP17.36■□□□□ 0.37
DDR1-253ENST00000504651 POLA2Q14181 598 aa17.36■□□□□ 0.37
DDR1-253ENST00000504651 SSH3Q8TE77 659 aa17.36■□□□□ 0.37
DDR1-253ENST00000504651 TMX4Q9H1E5 349 aaPredicted RBP17.36■□□□□ 0.37
DDR1-253ENST00000504651 CNNM1Q9NRU3 951 aa17.36■□□□□ 0.37
DDR1-253ENST00000504651 PA2G4Q9UQ80 394 aaKnown RBP17.36■□□□□ 0.37
DDR1-253ENST00000504651 LTBP1Q14766 1721 aa17.35■□□□□ 0.37
DDR1-253ENST00000504651 C21orf2O43822 256 aa17.35■□□□□ 0.37
DDR1-253ENST00000504651 LDHAL6AQ6ZMR3 332 aa17.35■□□□□ 0.37
DDR1-253ENST00000504651 SLC51AQ86UW1 340 aa17.35■□□□□ 0.37
DDR1-253ENST00000504651 SIL1Q9H173 461 aa17.35■□□□□ 0.37
DDR1-253ENST00000504651 BSDC1Q9NW68 430 aaPredicted RBP17.35■□□□□ 0.37
DDR1-253ENST00000504651 ATP6V0A2Q9Y487 856 aa17.35■□□□□ 0.37
DDR1-253ENST00000504651 PCDHB15Q9Y5E8 787 aa17.35■□□□□ 0.37
DDR1-253ENST00000504651 FER1L6Q2WGJ9 1857 aa17.35■□□□□ 0.37
DDR1-253ENST00000504651 CCDC93Q567U6 631 aa17.34■□□□□ 0.37
DDR1-253ENST00000504651 SOGA3Q5TF21 947 aa17.34■□□□□ 0.37
DDR1-253ENST00000504651 SIRT2Q8IXJ6 389 aa17.34■□□□□ 0.37
DDR1-253ENST00000504651 SP8Q8IXZ3 490 aa17.34■□□□□ 0.37
DDR1-253ENST00000504651 COPRSQ9NQ92 184 aa17.34■□□□□ 0.37
DDR1-253ENST00000504651 DUOX1Q9NRD9 1551 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms