RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 KIAA0907Q7Z7F0 614 aaPredicted RBP6.63□□□□□ -1.35
NIPBL-204ENST00000504430 APPBP2Q92624 585 aa6.63□□□□□ -1.35
NIPBL-204ENST00000504430 SCINQ9Y6U3 715 aa6.63□□□□□ -1.35
NIPBL-204ENST00000504430 ANP32CO43423 234 aa6.62□□□□□ -1.35
NIPBL-204ENST00000504430 EIF4BP23588 611 aaKnown RBP6.62□□□□□ -1.35
NIPBL-204ENST00000504430 TOMM20Q15388 145 aa6.62□□□□□ -1.35
NIPBL-204ENST00000504430 C1QTNF12Q5T7M4 302 aa6.62□□□□□ -1.35
NIPBL-204ENST00000504430 EFCAB2Q5VUJ9 269 aa6.62□□□□□ -1.35
NIPBL-204ENST00000504430 SLC39A7Q92504 469 aa6.62□□□□□ -1.35
NIPBL-204ENST00000504430 CASS4Q9NQ75 786 aa6.62□□□□□ -1.35
NIPBL-204ENST00000504430 PUF60Q9UHX1 559 aaKnown RBP6.62□□□□□ -1.35
NIPBL-204ENST00000504430 TAGLN3Q9UI15 199 aa6.62□□□□□ -1.35
NIPBL-204ENST00000504430 PPT2Q9UMR5 302 aa6.62□□□□□ -1.35
NIPBL-204ENST00000504430 LZTS1Q9Y250 596 aa6.62□□□□□ -1.35
NIPBL-204ENST00000504430 DIS3Q9Y2L1 958 aaKnown RBP6.62□□□□□ -1.35
NIPBL-204ENST00000504430 GOLGA6CA6NDK9 693 aa6.62□□□□□ -1.35
NIPBL-204ENST00000504430 GOLGA6BA6NDN3 693 aa6.62□□□□□ -1.35
NIPBL-204ENST00000504430 GOLGA6DP0CG33 693 aa6.62□□□□□ -1.35
NIPBL-204ENST00000504430 BRD3Q15059 726 aa6.62□□□□□ -1.35
NIPBL-204ENST00000504430 SUGP1Q8IWZ8 645 aaKnown RBP6.62□□□□□ -1.35
NIPBL-204ENST00000504430 FTSJ3Q8IY81 847 aaKnown RBP6.62□□□□□ -1.35
NIPBL-204ENST00000504430 GOLGA6AQ9NYA3 693 aa6.62□□□□□ -1.35
NIPBL-204ENST00000504430 ATP8A1Q9Y2Q0 1164 aa6.62□□□□□ -1.35
NIPBL-204ENST00000504430 USP3Q9Y6I4 520 aa6.62□□□□□ -1.35
NIPBL-204ENST00000504430 FAM160A1Q05DH4 1040 aa6.62□□□□□ -1.35
NIPBL-204ENST00000504430 PDXDC2PQ6P474 469 aa6.62□□□□□ -1.35
NIPBL-204ENST00000504430 ZHX3Q9H4I2 956 aa6.62□□□□□ -1.35
NIPBL-204ENST00000504430 UBP1Q9NZI7 540 aa6.62□□□□□ -1.35
NIPBL-204ENST00000504430 NFX1Q12986 1120 aaKnown RBP6.61□□□□□ -1.35
NIPBL-204ENST00000504430 MAP3K11Q16584 847 aa6.61□□□□□ -1.35
NIPBL-204ENST00000504430 ARMC3Q5W041 872 aa6.61□□□□□ -1.35
NIPBL-204ENST00000504430 SLC4A10Q6U841 1118 aa6.61□□□□□ -1.35
NIPBL-204ENST00000504430 KSR2Q6VAB6 950 aa6.61□□□□□ -1.35
NIPBL-204ENST00000504430 IRS4O14654 1257 aaPredicted RBP6.61□□□□□ -1.35
NIPBL-204ENST00000504430 KATNA1O75449 491 aa6.61□□□□□ -1.35
NIPBL-204ENST00000504430 USP17L7P0C7H9 530 aa6.61□□□□□ -1.35
NIPBL-204ENST00000504430 TRAPPC10P48553 1259 aa6.61□□□□□ -1.35
NIPBL-204ENST00000504430 RASSF7Q02833 373 aa6.61□□□□□ -1.35
NIPBL-204ENST00000504430 KCTD2Q14681 263 aa6.61□□□□□ -1.35
NIPBL-204ENST00000504430 NXPE4Q6UWF7 544 aa6.61□□□□□ -1.35
NIPBL-204ENST00000504430 PAF1Q8N7H5 531 aa6.61□□□□□ -1.35
NIPBL-204ENST00000504430 ALKBH8Q96BT7 664 aaKnown RBP6.61□□□□□ -1.35
NIPBL-204ENST00000504430 NAP1L4Q99733 375 aaKnown RBP6.61□□□□□ -1.35
NIPBL-204ENST00000504430 PPP1R12BO60237 982 aaPredicted RBP6.6□□□□□ -1.35
NIPBL-204ENST00000504430 CC2D1AQ6P1N0 951 aaPredicted RBP6.6□□□□□ -1.35
NIPBL-204ENST00000504430 PCGF5Q86SE9 256 aa6.6□□□□□ -1.35
NIPBL-204ENST00000504430 GJD3Q8N144 294 aa6.6□□□□□ -1.35
NIPBL-204ENST00000504430 FRMD6Q96NE9 622 aa6.6□□□□□ -1.35
NIPBL-204ENST00000504430 CSRNP1Q96S65 589 aa6.6□□□□□ -1.35
NIPBL-204ENST00000504430 GGNBP2Q9H3C7 697 aa6.6□□□□□ -1.35
NIPBL-204ENST00000504430 KLK14Q9P0G3 267 aa6.6□□□□□ -1.35
NIPBL-204ENST00000504430 NPHP1O15259 732 aa6.6□□□□□ -1.35
NIPBL-204ENST00000504430 NOS2P35228 1153 aa6.6□□□□□ -1.35
NIPBL-204ENST00000504430 PTPN12Q05209 780 aaKnown RBP6.6□□□□□ -1.35
NIPBL-204ENST00000504430 C4orf48Q5BLP8 95 aa6.6□□□□□ -1.35
NIPBL-204ENST00000504430 SPATC1Q76KD6 591 aa6.6□□□□□ -1.35
NIPBL-204ENST00000504430 GPR152Q8TDT2 470 aa6.6□□□□□ -1.35
NIPBL-204ENST00000504430 EAF1Q96JC9 268 aaPredicted RBP6.6□□□□□ -1.35
NIPBL-204ENST00000504430 CEP89Q96ST8 783 aa6.6□□□□□ -1.35
NIPBL-204ENST00000504430 MRPS23Q9Y3D9 190 aaKnown RBP6.6□□□□□ -1.35
NIPBL-204ENST00000504430 DAAM1Q9Y4D1 1078 aa6.6□□□□□ -1.35
NIPBL-204ENST00000504430 COPB2P35606 906 aa6.6□□□□□ -1.35
NIPBL-204ENST00000504430 PSEN2P49810 448 aa6.6□□□□□ -1.35
NIPBL-204ENST00000504430 RAB27AP51159 221 aa6.6□□□□□ -1.35
NIPBL-204ENST00000504430 INO80DQ53TQ3 878 aaPredicted RBP6.6□□□□□ -1.35
NIPBL-204ENST00000504430 ASTLQ6HA08 431 aaPredicted RBP6.6□□□□□ -1.35
NIPBL-204ENST00000504430 PTCRAQ6ISU1 281 aaPredicted RBP6.6□□□□□ -1.35
NIPBL-204ENST00000504430 ERAP2Q6P179 960 aa6.6□□□□□ -1.35
NIPBL-204ENST00000504430 DDX42Q86XP3 938 aaKnown RBP eCLIP6.6□□□□□ -1.35
NIPBL-204ENST00000504430 NOB1Q9ULX3 412 aaKnown RBP6.6□□□□□ -1.35
NIPBL-204ENST00000504430 USP20Q9Y2K6 914 aa6.6□□□□□ -1.35
NIPBL-204ENST00000504430 KRT18P05783 430 aaKnown RBP6.59□□□□□ -1.35
NIPBL-204ENST00000504430 IGFBP4P22692 258 aa6.59□□□□□ -1.35
NIPBL-204ENST00000504430 SCNN1DP51172 638 aa6.59□□□□□ -1.35
NIPBL-204ENST00000504430 LINC01559Q495D7 138 aa6.59□□□□□ -1.35
NIPBL-204ENST00000504430 IER5LQ5T953 404 aa6.59□□□□□ -1.35
NIPBL-204ENST00000504430 CCSAPQ6IQ19 270 aaPredicted RBP6.59□□□□□ -1.35
NIPBL-204ENST00000504430 TBX3O15119 743 aa6.59□□□□□ -1.35
NIPBL-204ENST00000504430 DIAPH1O60610 1272 aaKnown RBP6.59□□□□□ -1.35
NIPBL-204ENST00000504430 EXOSC10Q01780 885 aaKnown RBP6.59□□□□□ -1.35
NIPBL-204ENST00000504430 AGERQ15109 404 aa6.59□□□□□ -1.35
NIPBL-204ENST00000504430 PPP2R5AQ15172 486 aa6.59□□□□□ -1.35
NIPBL-204ENST00000504430 TAF1CQ15572 869 aaPredicted RBP6.59□□□□□ -1.35
NIPBL-204ENST00000504430 SLC4A8Q2Y0W8 1093 aa6.59□□□□□ -1.35
NIPBL-204ENST00000504430 NUDT12Q9BQG2 462 aa6.59□□□□□ -1.35
NIPBL-204ENST00000504430 RAB6BQ9NRW1 208 aa6.59□□□□□ -1.35
NIPBL-204ENST00000504430 FOXD3Q9UJU5 478 aaPredicted RBP6.59□□□□□ -1.35
NIPBL-204ENST00000504430 PRKAB1Q9Y478 270 aa6.59□□□□□ -1.35
NIPBL-204ENST00000504430 SMAD7O15105 426 aaKnown RBP6.59□□□□□ -1.36
NIPBL-204ENST00000504430 ASMTLO95671 621 aa6.59□□□□□ -1.36
NIPBL-204ENST00000504430 ATF3P18847 181 aa6.59□□□□□ -1.36
NIPBL-204ENST00000504430 CRKP46108 304 aa6.59□□□□□ -1.36
NIPBL-204ENST00000504430 EVX2Q03828 476 aa6.59□□□□□ -1.36
NIPBL-204ENST00000504430 USP4Q13107 963 aa6.59□□□□□ -1.36
NIPBL-204ENST00000504430 CBX2Q14781 532 aaPredicted RBP6.59□□□□□ -1.36
NIPBL-204ENST00000504430 ERFEQ4G0M1 354 aa6.59□□□□□ -1.36
NIPBL-204ENST00000504430 ERMP1Q7Z2K6 904 aa6.59□□□□□ -1.36
NIPBL-204ENST00000504430 NUDT16Q96DE0 195 aaKnown RBP6.59□□□□□ -1.36
NIPBL-204ENST00000504430 CITED4Q96RK1 184 aa6.59□□□□□ -1.36
NIPBL-204ENST00000504430 TYW1Q9NV66 732 aaKnown RBP6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms