RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 SFMBT2Q5VUG0 894 aa4.34□□□□□ -1.71
PCDH11X-208ENST00000504220 LRCH2Q5VUJ6 765 aa4.34□□□□□ -1.71
PCDH11X-208ENST00000504220 TTC30AQ86WT1 665 aa4.34□□□□□ -1.71
PCDH11X-208ENST00000504220 HOMER1Q86YM7 354 aa4.34□□□□□ -1.71
PCDH11X-208ENST00000504220 STK11IPQ8N1F8 1099 aa4.34□□□□□ -1.71
PCDH11X-208ENST00000504220 STAG2Q8N3U4 1231 aa4.34□□□□□ -1.71
PCDH11X-208ENST00000504220 ADAMTS8Q9UP79 889 aa4.34□□□□□ -1.71
PCDH11X-208ENST00000504220 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.34□□□□□ -1.71
PCDH11X-208ENST00000504220 CCDC196A0A1B0GTZ2 297 aa4.34□□□□□ -1.72
PCDH11X-208ENST00000504220 IPO7O95373 1038 aaKnown RBP4.34□□□□□ -1.72
PCDH11X-208ENST00000504220 HMOX1P09601 288 aa4.34□□□□□ -1.72
PCDH11X-208ENST00000504220 TNNT1P13805 278 aa4.34□□□□□ -1.72
PCDH11X-208ENST00000504220 RPS6KA3P51812 740 aa4.34□□□□□ -1.72
PCDH11X-208ENST00000504220 E2F4Q16254 413 aa4.34□□□□□ -1.72
PCDH11X-208ENST00000504220 CDCA2Q69YH5 1023 aaPredicted RBP4.34□□□□□ -1.72
PCDH11X-208ENST00000504220 IQUBQ8NA54 791 aa4.34□□□□□ -1.72
PCDH11X-208ENST00000504220 IFT57Q9NWB7 429 aa4.34□□□□□ -1.72
PCDH11X-208ENST00000504220 AMOTL2Q9Y2J4 779 aa4.34□□□□□ -1.72
PCDH11X-208ENST00000504220 LRPPRCP42704 1394 aaKnown RBP4.34□□□□□ -1.72
PCDH11X-208ENST00000504220 ABCC11Q96J66 1382 aa4.34□□□□□ -1.72
PCDH11X-208ENST00000504220 CYP27B1O15528 508 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 BCAR3O75815 825 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 ATF3P18847 181 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 CDC37Q16543 378 aaPredicted RBP4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 GOLGA6L1Q8N7Z2 621 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 BICD2Q8TD16 824 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 TBC1D2Q9BYX2 928 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 ZSCAN16Q9H4T2 348 aaPredicted RBP4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 QRICH2Q9H0J4 1663 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 KDRP35968 1356 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 UNCXA6NJT0 531 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 FCHSD2O94868 740 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 PYGBP11216 843 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 ZNF24P17028 368 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 NASPP49321 788 aaPredicted RBP4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 AMPHP49418 695 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 KMT5BQ4FZB7 885 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 ESCO1Q5FWF5 840 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 ISM2Q6H9L7 571 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 DZIP1LQ8IYY4 767 aaKnown RBP4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 RBSNQ9H1K0 784 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 ARHGEF10LQ9HCE6 1279 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 AKAP12Q02952 1782 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 MPHOSPH10O00566 681 aaKnown RBP4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 TIMM44O43615 452 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 PRPF40AO75400 957 aaKnown RBP4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 PREPLQ4J6C6 727 aaPredicted RBP4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 CCDC178Q5BJE1 867 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 HDGFL1Q5TGJ6 251 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 TTLL5Q6EMB2 1281 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 SPC24Q8NBT2 197 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 DRC1Q96MC2 740 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 ANAPC4Q9UJX5 808 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 TMEM98Q9Y2Y6 226 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 FHOD1Q9Y613 1164 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 NRKQ7Z2Y5 1582 aa4.33□□□□□ -1.72
PCDH11X-208ENST00000504220 BOLA2-SMG1P6H3BVE0 249 aa4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 TPM3P06753 285 aa4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 KRBA2Q6ZNG9 492 aa4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 CEP89Q96ST8 783 aa4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 RASSF4Q9H2L5 321 aa4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 PXDNQ92626 1479 aa4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 CGNL1Q0VF96 1302 aa4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 KIF7Q2M1P5 1343 aa4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 NWD2Q9ULI1 1742 aa4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 TCHHQ07283 1943 aa4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 CFAP69A5D8W1 941 aa4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 HTATSF1O43719 755 aaKnown RBP4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 SF3B2Q13435 895 aaKnown RBP4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 GINM1Q9NU53 330 aa4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 CALCOCO1Q9P1Z2 691 aa4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 TIMM22Q9Y584 194 aa4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 BRD4O60885 1362 aaPredicted RBP4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 PLA2G4AP47712 749 aa4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 APLP1P51693 650 aa4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 TPM4P67936 248 aa4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 ST5P78524 1137 aa4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 CEBPZQ03701 1054 aaKnown RBP4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 PSME1Q06323 249 aa4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 ACRBPQ8NEB7 543 aa4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 GGNBP2Q9H3C7 697 aa4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 BIN2Q9UBW5 565 aaPredicted RBP4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 PPME1Q9Y570 386 aa4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 NRAPQ86VF7 1730 aa4.32□□□□□ -1.72
PCDH11X-208ENST00000504220 ROBO2Q9HCK4 1378 aa4.31□□□□□ -1.72
PCDH11X-208ENST00000504220 PHRF1Q9P1Y6 1649 aaKnown RBP4.31□□□□□ -1.72
PCDH11X-208ENST00000504220 IMPDH2P12268 514 aa4.31□□□□□ -1.72
PCDH11X-208ENST00000504220 RAB27AP51159 221 aa4.31□□□□□ -1.72
PCDH11X-208ENST00000504220 CTAG1AP78358 180 aa4.31□□□□□ -1.72
PCDH11X-208ENST00000504220 CYP4A11Q02928 519 aa4.31□□□□□ -1.72
PCDH11X-208ENST00000504220 TPD52L1Q16890 204 aaPredicted RBP4.31□□□□□ -1.72
PCDH11X-208ENST00000504220 SMUG1Q53HV7 270 aa4.31□□□□□ -1.72
PCDH11X-208ENST00000504220 DUSP27Q5VZP5 1158 aa4.31□□□□□ -1.72
PCDH11X-208ENST00000504220 FOXR1Q6PIV2 292 aa4.31□□□□□ -1.72
PCDH11X-208ENST00000504220 ANKK1Q8NFD2 765 aa4.31□□□□□ -1.72
PCDH11X-208ENST00000504220 TAF4BQ92750 862 aa4.31□□□□□ -1.72
PCDH11X-208ENST00000504220 XAGE2Q96GT9 111 aa4.31□□□□□ -1.72
PCDH11X-208ENST00000504220 DIAPH3Q9NSV4 1193 aa4.31□□□□□ -1.72
PCDH11X-208ENST00000504220 HOXC10Q9NYD6 342 aa4.31□□□□□ -1.72
PCDH11X-208ENST00000504220 YTHDC2Q9H6S0 1430 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms