RNA–Protein interactions for RNA: ENST00000504101.1

POLR2J3-208, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-208ENST00000504101 HSP90AB3PQ58FF7 597 aa22.2■■□□□ 1.14
POLR2J3-208ENST00000504101 SP8Q8IXZ3 490 aa22.2■■□□□ 1.14
POLR2J3-208ENST00000504101 BCL2L13Q9BXK5 485 aa22.2■■□□□ 1.14
POLR2J3-208ENST00000504101 TSKSQ9UJT2 592 aa22.2■■□□□ 1.14
POLR2J3-208ENST00000504101 RAD17O75943 681 aa22.19■■□□□ 1.14
POLR2J3-208ENST00000504101 HCLS1P14317 486 aaPredicted RBP22.19■■□□□ 1.14
POLR2J3-208ENST00000504101 CCDC85CA6NKD9 419 aa22.18■■□□□ 1.14
POLR2J3-208ENST00000504101 TNIP1Q15025 636 aa22.18■■□□□ 1.14
POLR2J3-208ENST00000504101 DDX46Q7L014 1031 aaKnown RBP22.18■■□□□ 1.14
POLR2J3-208ENST00000504101 NLRP10Q86W26 655 aa22.18■■□□□ 1.14
POLR2J3-208ENST00000504101 HHIPL1Q96JK4 782 aa22.18■■□□□ 1.14
POLR2J3-208ENST00000504101 ZNF408Q9H9D4 720 aa22.18■■□□□ 1.14
POLR2J3-208ENST00000504101 PGAP2Q9UHJ9 254 aa22.18■■□□□ 1.14
POLR2J3-208ENST00000504101 RIPK4P57078 832 aa22.17■■□□□ 1.14
POLR2J3-208ENST00000504101 AIMP1Q12904 312 aaKnown RBP22.17■■□□□ 1.14
POLR2J3-208ENST00000504101 GRAPQ13588 217 aa22.17■■□□□ 1.14
POLR2J3-208ENST00000504101 COPS6Q7L5N1 327 aa22.17■■□□□ 1.14
POLR2J3-208ENST00000504101 GRAPLQ8TC17 118 aaPredicted RBP22.17■■□□□ 1.14
POLR2J3-208ENST00000504101 XAGE3Q8WTP9 111 aa22.17■■□□□ 1.14
POLR2J3-208ENST00000504101 ZC3H15Q8WU90 426 aaKnown RBP22.17■■□□□ 1.14
POLR2J3-208ENST00000504101 NECTIN2Q92692 538 aa22.17■■□□□ 1.14
POLR2J3-208ENST00000504101 BABAM1Q9NWV8 329 aa22.17■■□□□ 1.14
POLR2J3-208ENST00000504101 TRMT112Q9UI30 125 aaKnown RBP22.17■■□□□ 1.14
POLR2J3-208ENST00000504101 SH3TC1Q8TE82 1336 aa22.16■■□□□ 1.14
POLR2J3-208ENST00000504101 CA12O43570 354 aa22.16■■□□□ 1.14
POLR2J3-208ENST00000504101 HIRAP54198 1017 aaPredicted RBP22.16■■□□□ 1.14
POLR2J3-208ENST00000504101 TRPM4Q8TD43 1214 aa22.16■■□□□ 1.14
POLR2J3-208ENST00000504101 TCIRG1Q13488 830 aa22.15■■□□□ 1.14
POLR2J3-208ENST00000504101 CDC37L1Q7L3B6 337 aa22.15■■□□□ 1.14
POLR2J3-208ENST00000504101 DUOX1Q9NRD9 1551 aa22.15■■□□□ 1.14
POLR2J3-208ENST00000504101 TAF1P21675 1872 aa22.14■■□□□ 1.13
POLR2J3-208ENST00000504101 YDJCA8MPS7 323 aa22.14■■□□□ 1.13
POLR2J3-208ENST00000504101 BRPF1P55201 1214 aaPredicted RBP22.14■■□□□ 1.13
POLR2J3-208ENST00000504101 LRRC37AA6NMS7 1700 aa22.14■■□□□ 1.13
POLR2J3-208ENST00000504101 SHTN1A0MZ66 631 aa22.13■■□□□ 1.13
POLR2J3-208ENST00000504101 LMOD3Q0VAK6 560 aa22.13■■□□□ 1.13
POLR2J3-208ENST00000504101 TMC4Q7Z404 712 aa22.13■■□□□ 1.13
POLR2J3-208ENST00000504101 CNOT7Q9UIV1 285 aaKnown RBP22.13■■□□□ 1.13
POLR2J3-208ENST00000504101 H7C1D1 291 aa22.12■■□□□ 1.13
POLR2J3-208ENST00000504101 MLLT1Q03111 559 aaPredicted RBP22.12■■□□□ 1.13
POLR2J3-208ENST00000504101 MICALL2Q8IY33 904 aa22.12■■□□□ 1.13
POLR2J3-208ENST00000504101 CASP8AP2Q9UKL3 1982 aa22.12■■□□□ 1.13
POLR2J3-208ENST00000504101 TMPOP42166 694 aaKnown RBP22.11■■□□□ 1.13
POLR2J3-208ENST00000504101 ZNF428Q96B54 188 aa22.11■■□□□ 1.13
POLR2J3-208ENST00000504101 DDX60Q8IY21 1712 aaKnown RBP22.1■■□□□ 1.13
POLR2J3-208ENST00000504101 MCOLN1Q9GZU1 580 aa22.1■■□□□ 1.13
POLR2J3-208ENST00000504101 SLC34A2O95436 690 aa22.09■■□□□ 1.13
POLR2J3-208ENST00000504101 RGS19P49795 217 aa22.09■■□□□ 1.13
POLR2J3-208ENST00000504101 NOGQ13253 232 aa22.09■■□□□ 1.13
POLR2J3-208ENST00000504101 USP48Q86UV5 1035 aa22.09■■□□□ 1.13
POLR2J3-208ENST00000504101 ZBTB12Q9Y330 459 aaPredicted RBP22.09■■□□□ 1.13
POLR2J3-208ENST00000504101 PSMD14O00487 310 aa22.08■■□□□ 1.13
POLR2J3-208ENST00000504101 HUNKP57058 714 aa22.08■■□□□ 1.13
POLR2J3-208ENST00000504101 KRT24Q2M2I5 525 aa22.08■■□□□ 1.13
POLR2J3-208ENST00000504101 WASHC4Q2M389 1173 aa22.08■■□□□ 1.13
POLR2J3-208ENST00000504101 DPF2Q92785 391 aa22.08■■□□□ 1.13
POLR2J3-208ENST00000504101 DBNDD1Q9H9R9 158 aa22.08■■□□□ 1.13
POLR2J3-208ENST00000504101 CHPF2Q9P2E5 772 aa22.08■■□□□ 1.13
POLR2J3-208ENST00000504101 SAMD7Q7Z3H4 446 aa22.07■■□□□ 1.12
POLR2J3-208ENST00000504101 CFAP44Q96MT7 982 aa22.07■■□□□ 1.12
POLR2J3-208ENST00000504101 NSFL1CQ9UNZ2 370 aaKnown RBP22.07■■□□□ 1.12
POLR2J3-208ENST00000504101 DLK2Q6UY11 383 aa22.06■■□□□ 1.12
POLR2J3-208ENST00000504101 PLBD2Q8NHP8 589 aa22.06■■□□□ 1.12
POLR2J3-208ENST00000504101 CELF1Q92879 486 aaKnown RBP22.06■■□□□ 1.12
POLR2J3-208ENST00000504101 ZIC5Q96T25 663 aa22.06■■□□□ 1.12
POLR2J3-208ENST00000504101 DGKZQ13574 1117 aa22.05■■□□□ 1.12
POLR2J3-208ENST00000504101 SF3B3Q15393 1217 aaKnown RBP22.05■■□□□ 1.12
POLR2J3-208ENST00000504101 TBC1D10BQ4KMP7 808 aaPredicted RBP22.05■■□□□ 1.12
POLR2J3-208ENST00000504101 HDGFL1Q5TGJ6 251 aa22.05■■□□□ 1.12
POLR2J3-208ENST00000504101 KRT26Q7Z3Y9 468 aa22.05■■□□□ 1.12
POLR2J3-208ENST00000504101 FAM89AQ96GI7 184 aa22.05■■□□□ 1.12
POLR2J3-208ENST00000504101 C6orf229H3BNL8 230 aa22.04■■□□□ 1.12
POLR2J3-208ENST00000504101 CHL1O00533 1208 aa22.04■■□□□ 1.12
POLR2J3-208ENST00000504101 RIMBP2O15034 1052 aa22.04■■□□□ 1.12
POLR2J3-208ENST00000504101 NEUROD2Q15784 382 aa22.04■■□□□ 1.12
POLR2J3-208ENST00000504101 ISCA1Q9BUE6 129 aa22.04■■□□□ 1.12
POLR2J3-208ENST00000504101 POLLQ9UGP5 575 aa22.04■■□□□ 1.12
POLR2J3-208ENST00000504101 LAS1LQ9Y4W2 734 aaKnown RBP22.04■■□□□ 1.12
POLR2J3-208ENST00000504101 ECE2O60344 883 aa22.03■■□□□ 1.12
POLR2J3-208ENST00000504101 EGFRP00533 1210 aa22.03■■□□□ 1.12
POLR2J3-208ENST00000504101 RPS12P25398 132 aaKnown RBP22.03■■□□□ 1.12
POLR2J3-208ENST00000504101 GPSM2P81274 684 aa22.03■■□□□ 1.12
POLR2J3-208ENST00000504101 ANKRD13DQ6ZTN6 518 aa22.03■■□□□ 1.12
POLR2J3-208ENST00000504101 GBA2Q9HCG7 927 aaPredicted RBP22.03■■□□□ 1.12
POLR2J3-208ENST00000504101 COL4A1P02462 1669 aa22.03■■□□□ 1.12
POLR2J3-208ENST00000504101 POLR2AP24928 1970 aaKnown RBP22.03■■□□□ 1.12
POLR2J3-208ENST00000504101 RTL9Q8NET4 1388 aa22.02■■□□□ 1.12
POLR2J3-208ENST00000504101 ATP5J2-PTCD1G3V325 749 aa22.02■■□□□ 1.12
POLR2J3-208ENST00000504101 RALBP1Q15311 655 aa22.02■■□□□ 1.12
POLR2J3-208ENST00000504101 RBM26Q5T8P6 1007 aaKnown RBP22.02■■□□□ 1.12
POLR2J3-208ENST00000504101 RGMBQ6NW40 437 aa22.02■■□□□ 1.12
POLR2J3-208ENST00000504101 CCDC146Q8IYE0 955 aa22.02■■□□□ 1.12
POLR2J3-208ENST00000504101 DCPSQ96C86 337 aaKnown RBP22.02■■□□□ 1.12
POLR2J3-208ENST00000504101 EYA3Q99504 573 aa22.02■■□□□ 1.12
POLR2J3-208ENST00000504101 ADM5C9JUS6 153 aa22.01■■□□□ 1.11
POLR2J3-208ENST00000504101 HOXB7P09629 217 aa22.01■■□□□ 1.11
POLR2J3-208ENST00000504101 DOK7Q18PE1 504 aa22.01■■□□□ 1.11
POLR2J3-208ENST00000504101 RTL5Q5HYW3 569 aaPredicted RBP22.01■■□□□ 1.11
POLR2J3-208ENST00000504101 C2orf69Q8N8R5 385 aa22.01■■□□□ 1.11
POLR2J3-208ENST00000504101 DBF4Q9UBU7 674 aaPredicted RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms