RNA–Protein interactions for RNA: ENST00000504091.1

SH3TC2-204, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 4,522 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-204ENST00000504091 VAMP4O75379 141 aa8.07□□□□□ -1.12
SH3TC2-204ENST00000504091 JAKMIP3Q5VZ66 844 aa8.07□□□□□ -1.12
SH3TC2-204ENST00000504091 CCDC150Q8NCX0 1101 aa8.07□□□□□ -1.12
SH3TC2-204ENST00000504091 SMARCE1Q969G3 411 aa8.07□□□□□ -1.12
SH3TC2-204ENST00000504091 ZCCHC17Q9NP64 241 aaKnown RBP8.07□□□□□ -1.12
SH3TC2-204ENST00000504091 AK2P54819 239 aa8.07□□□□□ -1.12
SH3TC2-204ENST00000504091 SART3Q15020 963 aaKnown RBP8.07□□□□□ -1.12
SH3TC2-204ENST00000504091 PDILTQ8N807 584 aa8.07□□□□□ -1.12
SH3TC2-204ENST00000504091 FBXO18Q8NFZ0 1043 aa8.07□□□□□ -1.12
SH3TC2-204ENST00000504091 KIF1BPQ96EK5 621 aa8.07□□□□□ -1.12
SH3TC2-204ENST00000504091 CARD6Q9BX69 1037 aa8.07□□□□□ -1.12
SH3TC2-204ENST00000504091 NPHP3Q7Z494 1330 aa8.07□□□□□ -1.12
SH3TC2-204ENST00000504091 ZSCAN12O43309 604 aa8.07□□□□□ -1.12
SH3TC2-204ENST00000504091 FCHSD2O94868 740 aa8.07□□□□□ -1.12
SH3TC2-204ENST00000504091 ACTN2P35609 894 aa8.07□□□□□ -1.12
SH3TC2-204ENST00000504091 MUM1L1Q5H9M0 696 aa8.07□□□□□ -1.12
SH3TC2-204ENST00000504091 CNTROBQ8N137 903 aa8.07□□□□□ -1.12
SH3TC2-204ENST00000504091 STK26Q9P289 416 aa8.07□□□□□ -1.12
SH3TC2-204ENST00000504091 TNRQ92752 1358 aa8.07□□□□□ -1.12
SH3TC2-204ENST00000504091 SEC31AO94979 1220 aaKnown RBP8.06□□□□□ -1.12
SH3TC2-204ENST00000504091 GNAI2P04899 355 aa8.06□□□□□ -1.12
SH3TC2-204ENST00000504091 ATP6V1AP38606 617 aa8.06□□□□□ -1.12
SH3TC2-204ENST00000504091 TSPYL6Q8N831 410 aa8.06□□□□□ -1.12
SH3TC2-204ENST00000504091 CFAP45Q9UL16 551 aa8.06□□□□□ -1.12
SH3TC2-204ENST00000504091 CTAGE5O15320 804 aa8.06□□□□□ -1.12
SH3TC2-204ENST00000504091 DTNBO60941 627 aa8.06□□□□□ -1.12
SH3TC2-204ENST00000504091 LIG1P18858 919 aa8.06□□□□□ -1.12
SH3TC2-204ENST00000504091 CWC27Q6UX04 472 aaKnown RBP8.06□□□□□ -1.12
SH3TC2-204ENST00000504091 ZSWIM4Q9H7M6 989 aa8.06□□□□□ -1.12
SH3TC2-204ENST00000504091 ATAD2Q6PL18 1390 aa8.06□□□□□ -1.12
SH3TC2-204ENST00000504091 DDX54Q8TDD1 881 aaKnown RBP8.06□□□□□ -1.12
SH3TC2-204ENST00000504091 USP27XA6NNY8 438 aa8.06□□□□□ -1.12
SH3TC2-204ENST00000504091 AP5Z1O43299 807 aa8.06□□□□□ -1.12
SH3TC2-204ENST00000504091 SERPINC1P01008 464 aa8.06□□□□□ -1.12
SH3TC2-204ENST00000504091 GUCY2CP25092 1073 aa8.06□□□□□ -1.12
SH3TC2-204ENST00000504091 CHMLP26374 656 aa8.06□□□□□ -1.12
SH3TC2-204ENST00000504091 GNG11P61952 73 aa8.06□□□□□ -1.12
SH3TC2-204ENST00000504091 STK3Q13188 491 aa8.06□□□□□ -1.12
SH3TC2-204ENST00000504091 CEP85Q6P2H3 762 aa8.06□□□□□ -1.12
SH3TC2-204ENST00000504091 FAM173BQ6P4H8 233 aa8.06□□□□□ -1.12
SH3TC2-204ENST00000504091 SRLQ86TD4 932 aa8.06□□□□□ -1.12
SH3TC2-204ENST00000504091 PRDM16Q9HAZ2 1276 aa8.06□□□□□ -1.12
SH3TC2-204ENST00000504091 CABP2Q9NPB3 220 aa8.06□□□□□ -1.12
SH3TC2-204ENST00000504091 ATP8B1O43520 1251 aa8.05□□□□□ -1.12
SH3TC2-204ENST00000504091 PSMA5P28066 241 aa8.05□□□□□ -1.12
SH3TC2-204ENST00000504091 MAGEA9P43362 315 aa8.05□□□□□ -1.12
SH3TC2-204ENST00000504091 ST5P78524 1137 aa8.05□□□□□ -1.12
SH3TC2-204ENST00000504091 HSP90AB3PQ58FF7 597 aa8.05□□□□□ -1.12
SH3TC2-204ENST00000504091 TMEM132EQ6IEE7 984 aa8.05□□□□□ -1.12
SH3TC2-204ENST00000504091 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.05□□□□□ -1.12
SH3TC2-204ENST00000504091 TDRD7Q8NHU6 1098 aaKnown RBP8.05□□□□□ -1.12
SH3TC2-204ENST00000504091 PRDM15P57071 1507 aaPredicted RBP8.05□□□□□ -1.12
SH3TC2-204ENST00000504091 PHACTR2O75167 634 aa8.05□□□□□ -1.12
SH3TC2-204ENST00000504091 ARID5BQ14865 1188 aa8.05□□□□□ -1.12
SH3TC2-204ENST00000504091 NFE2L2Q16236 605 aa8.05□□□□□ -1.12
SH3TC2-204ENST00000504091 NECAB1Q8N987 351 aa8.05□□□□□ -1.12
SH3TC2-204ENST00000504091 EXOC4Q96A65 974 aa8.05□□□□□ -1.12
SH3TC2-204ENST00000504091 IL1RAPL2Q9NP60 686 aa8.05□□□□□ -1.12
SH3TC2-204ENST00000504091 IVNS1ABPQ9Y6Y0 642 aa8.05□□□□□ -1.12
SH3TC2-204ENST00000504091 NHSL1Q5SYE7 1610 aa8.05□□□□□ -1.12
SH3TC2-204ENST00000504091 ME1P48163 572 aa8.05□□□□□ -1.12
SH3TC2-204ENST00000504091 COL16A1Q07092 1604 aaPredicted RBP8.05□□□□□ -1.12
SH3TC2-204ENST00000504091 DCAF8Q5TAQ9 597 aa8.05□□□□□ -1.12
SH3TC2-204ENST00000504091 GPATCH3Q96I76 525 aa8.05□□□□□ -1.12
SH3TC2-204ENST00000504091 CLSTN2Q9H4D0 955 aa8.05□□□□□ -1.12
SH3TC2-204ENST00000504091 AOPEPQ8N6M6 819 aa8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 MEIS3Q99687 375 aa8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 ADAM21Q9UKJ8 722 aa8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 CEP83Q9Y592 693 aa8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 SYCP2Q9BX26 1530 aa8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 KIAA0754O94854 1291 aa8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 CCDC172P0C7W6 258 aa8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 CCDC144BQ3MJ40 725 aa8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 PROSER2Q86WR7 435 aaPredicted RBP8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 CCDC144CPQ8IYA2 1237 aa8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 MRFAP1L1Q96HT8 127 aa8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 GBP3Q9H0R5 595 aa8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 POLKQ9UBT6 870 aa8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 MKRN1Q9UHC7 482 aaKnown RBP8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 DCCP43146 1447 aa8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 GNAI3P08754 354 aa8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 LRRFIP1Q32MZ4 808 aaKnown RBP8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 GPIHBP1Q8IV16 184 aa8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 DDX11Q96FC9 970 aa8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 MBIPQ9NS73 344 aa8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 RGS12O14924 1447 aa8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 SURF6O75683 361 aaKnown RBP8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 ETF1P62495 437 aaKnown RBP8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 PRPF40BQ6NWY9 871 aaKnown RBP8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 ZNF662Q6ZS27 426 aa8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 NBPF11Q86T75 865 aa8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 SPG7Q9UQ90 795 aa8.04□□□□□ -1.12
SH3TC2-204ENST00000504091 EFCAB8A8MWE9 144 aa8.03□□□□□ -1.12
SH3TC2-204ENST00000504091 IBSPP21815 317 aaPredicted RBP8.03□□□□□ -1.12
SH3TC2-204ENST00000504091 PLA2G4AP47712 749 aa8.03□□□□□ -1.12
SH3TC2-204ENST00000504091 CFAP100Q494V2 611 aa8.03□□□□□ -1.12
SH3TC2-204ENST00000504091 DNAJC21Q5F1R6 531 aaKnown RBP8.03□□□□□ -1.12
SH3TC2-204ENST00000504091 TTC6Q86TZ1 520 aa8.03□□□□□ -1.12
SH3TC2-204ENST00000504091 PLA2G4DQ86XP0 818 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms