RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 PCDH11YQ9BZA8 1340 aa5.17□□□□□ -1.58
USP46-205ENST00000504078 NSD3Q9BZ95 1437 aa5.16□□□□□ -1.58
USP46-205ENST00000504078 FCHSD2O94868 740 aa5.16□□□□□ -1.58
USP46-205ENST00000504078 DPEP1P16444 411 aa5.16□□□□□ -1.58
USP46-205ENST00000504078 TRIM32Q13049 653 aa5.16□□□□□ -1.58
USP46-205ENST00000504078 NEUROD1Q13562 356 aa5.16□□□□□ -1.58
USP46-205ENST00000504078 ITPK1Q13572 414 aa5.16□□□□□ -1.58
USP46-205ENST00000504078 MSS51Q4VC12 460 aa5.16□□□□□ -1.58
USP46-205ENST00000504078 TMEM151AQ8N4L1 468 aa5.16□□□□□ -1.58
USP46-205ENST00000504078 RAPGEF4Q8WZA2 1011 aa5.16□□□□□ -1.58
USP46-205ENST00000504078 CFAP44Q96MT7 982 aa5.16□□□□□ -1.58
USP46-205ENST00000504078 SIN3AQ96ST3 1273 aa5.16□□□□□ -1.58
USP46-205ENST00000504078 RNF181Q9P0P0 153 aa5.16□□□□□ -1.58
USP46-205ENST00000504078 COL5A3P25940 1745 aaPredicted RBP5.16□□□□□ -1.58
USP46-205ENST00000504078 ERBB4Q15303 1308 aa5.16□□□□□ -1.58
USP46-205ENST00000504078 ARFGEF1Q9Y6D6 1849 aa5.16□□□□□ -1.58
USP46-205ENST00000504078 RTL1A6NKG5 1358 aa5.16□□□□□ -1.58
USP46-205ENST00000504078 PLEKHG2Q9H7P9 1386 aa5.16□□□□□ -1.58
USP46-205ENST00000504078 CYP27B1O15528 508 aa5.15□□□□□ -1.59
USP46-205ENST00000504078 OATP04181 439 aa5.15□□□□□ -1.59
USP46-205ENST00000504078 TATP17735 454 aaPredicted RBP5.15□□□□□ -1.59
USP46-205ENST00000504078 ATP6V1AP38606 617 aa5.15□□□□□ -1.59
USP46-205ENST00000504078 GSK3AP49840 483 aa5.15□□□□□ -1.59
USP46-205ENST00000504078 PAXIP1Q6ZW49 1069 aaPredicted RBP5.15□□□□□ -1.59
USP46-205ENST00000504078 GGNBP2Q9H3C7 697 aa5.15□□□□□ -1.59
USP46-205ENST00000504078 RRAGCQ9HB90 399 aa5.15□□□□□ -1.59
USP46-205ENST00000504078 KDRP35968 1356 aa5.15□□□□□ -1.59
USP46-205ENST00000504078 TJP1Q07157 1748 aa5.14□□□□□ -1.59
USP46-205ENST00000504078 ANKRD26Q9UPS8 1709 aa5.14□□□□□ -1.59
USP46-205ENST00000504078 LOC102724428A0A0B4J2F2 783 aa5.14□□□□□ -1.59
USP46-205ENST00000504078 SSFA2P28290 1259 aa5.14□□□□□ -1.59
USP46-205ENST00000504078 CHRNA5P30532 468 aa5.14□□□□□ -1.59
USP46-205ENST00000504078 SIK1P57059 783 aa5.14□□□□□ -1.59
USP46-205ENST00000504078 BRICD5Q6PL45 260 aa5.14□□□□□ -1.59
USP46-205ENST00000504078 JMYQ8N9B5 988 aa5.14□□□□□ -1.59
USP46-205ENST00000504078 PIGBQ92521 554 aa5.14□□□□□ -1.59
USP46-205ENST00000504078 COG3Q96JB2 828 aa5.14□□□□□ -1.59
USP46-205ENST00000504078 SRP68Q9UHB9 627 aaKnown RBP5.14□□□□□ -1.59
USP46-205ENST00000504078 ASAP1Q9ULH1 1129 aa5.14□□□□□ -1.59
USP46-205ENST00000504078 GDF11O95390 407 aa5.13□□□□□ -1.59
USP46-205ENST00000504078 VEGFBP49765 207 aa5.13□□□□□ -1.59
USP46-205ENST00000504078 HSP90AB2PQ58FF8 381 aa5.13□□□□□ -1.59
USP46-205ENST00000504078 FLAD1Q8NFF5 587 aa5.13□□□□□ -1.59
USP46-205ENST00000504078 ARHGEF1Q92888 912 aaKnown RBP5.13□□□□□ -1.59
USP46-205ENST00000504078 CARD11Q9BXL7 1154 aa5.13□□□□□ -1.59
USP46-205ENST00000504078 TERF2IPQ9NYB0 399 aa5.13□□□□□ -1.59
USP46-205ENST00000504078 MKRN1Q9UHC7 482 aaKnown RBP5.13□□□□□ -1.59
USP46-205ENST00000504078 SLC27A5Q9Y2P5 690 aa5.13□□□□□ -1.59
USP46-205ENST00000504078 EMILIN1Q9Y6C2 1016 aa5.13□□□□□ -1.59
USP46-205ENST00000504078 COL11A2P13942 1736 aaPredicted RBP5.13□□□□□ -1.59
USP46-205ENST00000504078 CACNA1SQ13698 1873 aa5.13□□□□□ -1.59
USP46-205ENST00000504078 RNF225M0QZC1 329 aaPredicted RBP5.12□□□□□ -1.59
USP46-205ENST00000504078 PPM1GO15355 546 aaPredicted RBP5.12□□□□□ -1.59
USP46-205ENST00000504078 VSIG8P0DPA2 414 aa5.12□□□□□ -1.59
USP46-205ENST00000504078 MLLT3P42568 568 aaPredicted RBP5.12□□□□□ -1.59
USP46-205ENST00000504078 WNT7BP56706 349 aa5.12□□□□□ -1.59
USP46-205ENST00000504078 DDR1Q08345 913 aa5.12□□□□□ -1.59
USP46-205ENST00000504078 FAM161AQ3B820 660 aa5.12□□□□□ -1.59
USP46-205ENST00000504078 RC3H1Q5TC82 1133 aaKnown RBP5.12□□□□□ -1.59
USP46-205ENST00000504078 TRIM46Q7Z4K8 759 aa5.12□□□□□ -1.59
USP46-205ENST00000504078 PXYLP1Q8TE99 480 aa5.12□□□□□ -1.59
USP46-205ENST00000504078 CCDC87Q9NVE4 849 aa5.12□□□□□ -1.59
USP46-205ENST00000504078 TMOD3Q9NYL9 352 aa5.12□□□□□ -1.59
USP46-205ENST00000504078 KDM2BQ8NHM5 1336 aa5.12□□□□□ -1.59
USP46-205ENST00000504078 FLT4P35916 1363 aa5.12□□□□□ -1.59
USP46-205ENST00000504078 CARMIL3Q8ND23 1372 aa5.12□□□□□ -1.59
USP46-205ENST00000504078 DLEC1Q9Y238 1755 aa5.11□□□□□ -1.59
USP46-205ENST00000504078 SBF1O95248 1867 aa5.11□□□□□ -1.59
USP46-205ENST00000504078 FOXN1O15353 648 aa5.11□□□□□ -1.59
USP46-205ENST00000504078 IGHA1P01876 353 aa5.11□□□□□ -1.59
USP46-205ENST00000504078 GYS1P13807 737 aa5.11□□□□□ -1.59
USP46-205ENST00000504078 KCNA3P22001 575 aa5.11□□□□□ -1.59
USP46-205ENST00000504078 FECHP22830 423 aa5.11□□□□□ -1.59
USP46-205ENST00000504078 MMP16P51512 607 aa5.11□□□□□ -1.59
USP46-205ENST00000504078 FUT2Q10981 343 aa5.11□□□□□ -1.59
USP46-205ENST00000504078 FSTL1Q12841 308 aa5.11□□□□□ -1.59
USP46-205ENST00000504078 SMC1BQ8NDV3 1235 aa5.11□□□□□ -1.59
USP46-205ENST00000504078 SMARCC1Q92922 1105 aaPredicted RBP5.11□□□□□ -1.59
USP46-205ENST00000504078 DCAF5Q96JK2 942 aa5.11□□□□□ -1.59
USP46-205ENST00000504078 SLC4A9Q96Q91 983 aa5.11□□□□□ -1.59
USP46-205ENST00000504078 PRDM9Q9NQV7 894 aa5.11□□□□□ -1.59
USP46-205ENST00000504078 PARP3Q9Y6F1 533 aa5.11□□□□□ -1.59
USP46-205ENST00000504078 INSRP06213 1382 aa5.11□□□□□ -1.59
USP46-205ENST00000504078 KDM6AO15550 1401 aaPredicted RBP5.11□□□□□ -1.59
USP46-205ENST00000504078 ADAMTS7Q9UKP4 1686 aa5.11□□□□□ -1.59
USP46-205ENST00000504078 AFDNP55196 1824 aaKnown RBP5.11□□□□□ -1.59
USP46-205ENST00000504078 CAPN5O15484 640 aaPredicted RBP5.1□□□□□ -1.59
USP46-205ENST00000504078 PCNTO95613 3336 aa5.1□□□□□ -1.59
USP46-205ENST00000504078 TMF1P82094 1093 aa5.1□□□□□ -1.59
USP46-205ENST00000504078 NCAPD2Q15021 1401 aa5.1□□□□□ -1.59
USP46-205ENST00000504078 CCDC88AQ3V6T2 1871 aa5.1□□□□□ -1.59
USP46-205ENST00000504078 DALRD3Q5D0E6 543 aaKnown RBP5.1□□□□□ -1.59
USP46-205ENST00000504078 MYH14Q7Z406 1995 aaKnown RBP5.1□□□□□ -1.59
USP46-205ENST00000504078 RTN4Q9NQC3 1192 aaKnown RBP5.1□□□□□ -1.59
USP46-205ENST00000504078 ATG3Q9NT62 314 aa5.1□□□□□ -1.59
USP46-205ENST00000504078 RTCBQ9Y3I0 505 aaKnown RBP5.1□□□□□ -1.59
USP46-205ENST00000504078 CGNL1Q0VF96 1302 aa5.09□□□□□ -1.59
USP46-205ENST00000504078 PTCD1O75127 700 aaKnown RBP5.09□□□□□ -1.59
USP46-205ENST00000504078 ALDH1A1P00352 501 aa5.09□□□□□ -1.59
USP46-205ENST00000504078 PHKG2P15735 406 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms