RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 SBF1O95248 1867 aa22.82■■□□□ 1.24
NFKB1-204ENST00000504044 LARGE2Q8N3Y3 721 aa22.82■■□□□ 1.24
NFKB1-204ENST00000504044 MPNDQ8N594 471 aa22.82■■□□□ 1.24
NFKB1-204ENST00000504044 CACNA1SQ13698 1873 aa22.81■■□□□ 1.24
NFKB1-204ENST00000504044 IQCA1LA6NCM1 817 aa22.81■■□□□ 1.24
NFKB1-204ENST00000504044 NEURL1BA8MQ27 555 aa22.81■■□□□ 1.24
NFKB1-204ENST00000504044 LINS1Q8NG48 757 aa22.81■■□□□ 1.24
NFKB1-204ENST00000504044 RBM46Q8TBY0 533 aaKnown RBP22.81■■□□□ 1.24
NFKB1-204ENST00000504044 IGKV5-2P06315 115 aa22.8■■□□□ 1.24
NFKB1-204ENST00000504044 EIF6P56537 245 aaKnown RBP22.8■■□□□ 1.24
NFKB1-204ENST00000504044 NIM1KQ8IY84 436 aa22.8■■□□□ 1.24
NFKB1-204ENST00000504044 PPIP5K2O43314 1243 aa22.79■■□□□ 1.24
NFKB1-204ENST00000504044 SLFN5Q08AF3 891 aa22.79■■□□□ 1.24
NFKB1-204ENST00000504044 TIAM2Q8IVF5 1701 aa22.79■■□□□ 1.24
NFKB1-204ENST00000504044 RPS8P62241 208 aaKnown RBP22.78■■□□□ 1.24
NFKB1-204ENST00000504044 CWF19L2Q2TBE0 894 aaKnown RBP22.78■■□□□ 1.24
NFKB1-204ENST00000504044 RTFDC1Q9BY42 306 aaPredicted RBP22.78■■□□□ 1.24
NFKB1-204ENST00000504044 SNED1Q8TER0 1413 aa22.77■■□□□ 1.24
NFKB1-204ENST00000504044 FSTL1Q12841 308 aa22.77■■□□□ 1.24
NFKB1-204ENST00000504044 GCKRQ14397 625 aa22.77■■□□□ 1.24
NFKB1-204ENST00000504044 SMC1BQ8NDV3 1235 aa22.77■■□□□ 1.24
NFKB1-204ENST00000504044 CDC5LQ99459 802 aaKnown RBP22.77■■□□□ 1.24
NFKB1-204ENST00000504044 FZD9O00144 591 aa22.76■■□□□ 1.23
NFKB1-204ENST00000504044 DDNO94850 711 aaPredicted RBP22.76■■□□□ 1.23
NFKB1-204ENST00000504044 CT47B1P0C2W7 299 aaPredicted RBP22.76■■□□□ 1.23
NFKB1-204ENST00000504044 CTSWP56202 376 aa22.76■■□□□ 1.23
NFKB1-204ENST00000504044 UBE3BQ7Z3V4 1068 aa22.76■■□□□ 1.23
NFKB1-204ENST00000504044 ANKRD18AQ8IVF6 992 aa22.76■■□□□ 1.23
NFKB1-204ENST00000504044 CELF1Q92879 486 aaKnown RBP22.76■■□□□ 1.23
NFKB1-204ENST00000504044 HSPA6P17066 643 aa22.75■■□□□ 1.23
NFKB1-204ENST00000504044 GPC2Q8N158 579 aa22.75■■□□□ 1.23
NFKB1-204ENST00000504044 L3MBTL3Q96JM7 780 aaPredicted RBP22.75■■□□□ 1.23
NFKB1-204ENST00000504044 EYA3Q99504 573 aa22.75■■□□□ 1.23
NFKB1-204ENST00000504044 H7C1W4 665 aa22.74■■□□□ 1.23
NFKB1-204ENST00000504044 NSFL1CQ9UNZ2 370 aaKnown RBP22.74■■□□□ 1.23
NFKB1-204ENST00000504044 MIER1Q8N108 512 aa22.73■■□□□ 1.23
NFKB1-204ENST00000504044 JARID2Q92833 1246 aaPredicted RBP22.73■■□□□ 1.23
NFKB1-204ENST00000504044 PTPRCP08575 1304 aa22.73■■□□□ 1.23
NFKB1-204ENST00000504044 DICER1Q9UPY3 1922 aaKnown RBP22.72■■□□□ 1.23
NFKB1-204ENST00000504044 DDX60Q8IY21 1712 aaKnown RBP22.72■■□□□ 1.23
NFKB1-204ENST00000504044 ALDH1L1O75891 902 aa22.72■■□□□ 1.23
NFKB1-204ENST00000504044 LMOD1P29536 600 aaPredicted RBP22.72■■□□□ 1.23
NFKB1-204ENST00000504044 KIAA2012Q0VF49 1180 aa22.72■■□□□ 1.23
NFKB1-204ENST00000504044 AOC3Q16853 763 aa22.72■■□□□ 1.23
NFKB1-204ENST00000504044 ALDH1L2Q3SY69 923 aa22.72■■□□□ 1.23
NFKB1-204ENST00000504044 PLA2G12BQ9BX93 195 aa22.72■■□□□ 1.23
NFKB1-204ENST00000504044 ZNF541Q9H0D2 1346 aa22.72■■□□□ 1.23
NFKB1-204ENST00000504044 LAMB2P55268 1798 aa22.71■■□□□ 1.23
NFKB1-204ENST00000504044 CACNA1FO60840 1977 aa22.71■■□□□ 1.23
NFKB1-204ENST00000504044 F6X3S4 739 aa22.71■■□□□ 1.23
NFKB1-204ENST00000504044 C6orf229H3BNL8 230 aa22.71■■□□□ 1.23
NFKB1-204ENST00000504044 BEND3Q5T5X7 828 aa22.71■■□□□ 1.23
NFKB1-204ENST00000504044 SLC4A10Q6U841 1118 aa22.71■■□□□ 1.23
NFKB1-204ENST00000504044 CCDC85AQ96PX6 553 aaPredicted RBP22.71■■□□□ 1.23
NFKB1-204ENST00000504044 SRCIN1Q9C0H9 1055 aa22.71■■□□□ 1.23
NFKB1-204ENST00000504044 ANKIB1Q9P2G1 1089 aa22.71■■□□□ 1.23
NFKB1-204ENST00000504044 ZNRF3Q9ULT6 936 aa22.71■■□□□ 1.23
NFKB1-204ENST00000504044 IGHMBP2P38935 993 aaKnown RBP22.7■■□□□ 1.22
NFKB1-204ENST00000504044 WASHC4Q2M389 1173 aa22.7■■□□□ 1.22
NFKB1-204ENST00000504044 TTLL11Q8NHH1 800 aa22.7■■□□□ 1.22
NFKB1-204ENST00000504044 SEC31BQ9NQW1 1179 aa22.7■■□□□ 1.22
NFKB1-204ENST00000504044 C9orf78Q9NZ63 289 aaPredicted RBP22.7■■□□□ 1.22
NFKB1-204ENST00000504044 HACL1Q9UJ83 578 aa22.7■■□□□ 1.22
NFKB1-204ENST00000504044 GJA3Q9Y6H8 435 aa22.7■■□□□ 1.22
NFKB1-204ENST00000504044 WDR90Q96KV7 1748 aa22.7■■□□□ 1.22
NFKB1-204ENST00000504044 CCDC88AQ3V6T2 1871 aa22.69■■□□□ 1.22
NFKB1-204ENST00000504044 RTL9Q8NET4 1388 aa22.69■■□□□ 1.22
NFKB1-204ENST00000504044 APLP1P51693 650 aa22.69■■□□□ 1.22
NFKB1-204ENST00000504044 CDCA7LQ96GN5 454 aa22.69■■□□□ 1.22
NFKB1-204ENST00000504044 G3V3G9 751 aa22.68■■□□□ 1.22
NFKB1-204ENST00000504044 TNIP1Q15025 636 aa22.68■■□□□ 1.22
NFKB1-204ENST00000504044 DCAF8Q5TAQ9 597 aa22.68■■□□□ 1.22
NFKB1-204ENST00000504044 PNMA8AQ86V59 439 aaPredicted RBP22.68■■□□□ 1.22
NFKB1-204ENST00000504044 MRPL50Q8N5N7 158 aaKnown RBP22.68■■□□□ 1.22
NFKB1-204ENST00000504044 SMC4Q9NTJ3 1288 aa22.68■■□□□ 1.22
NFKB1-204ENST00000504044 PODXL2Q9NZ53 605 aa22.68■■□□□ 1.22
NFKB1-204ENST00000504044 GGA1Q9UJY5 639 aa22.68■■□□□ 1.22
NFKB1-204ENST00000504044 GRM8O00222 908 aa22.67■■□□□ 1.22
NFKB1-204ENST00000504044 GPSM2P81274 684 aa22.67■■□□□ 1.22
NFKB1-204ENST00000504044 TRMT2AQ8IZ69 625 aaKnown RBP22.67■■□□□ 1.22
NFKB1-204ENST00000504044 SSH1Q8WYL5 1049 aa22.67■■□□□ 1.22
NFKB1-204ENST00000504044 ZC3H12CQ9C0D7 883 aaKnown RBP22.67■■□□□ 1.22
NFKB1-204ENST00000504044 XDHP47989 1333 aa22.66■■□□□ 1.22
NFKB1-204ENST00000504044 POTECB2RU33 542 aa22.66■■□□□ 1.22
NFKB1-204ENST00000504044 MPHOSPH8Q99549 860 aa22.66■■□□□ 1.22
NFKB1-204ENST00000504044 TAF1DQ9H5J8 278 aaPredicted RBP22.66■■□□□ 1.22
NFKB1-204ENST00000504044 GREM2Q9H772 168 aa22.66■■□□□ 1.22
NFKB1-204ENST00000504044 BSDC1Q9NW68 430 aaPredicted RBP22.66■■□□□ 1.22
NFKB1-204ENST00000504044 UFL1O94874 794 aa22.65■■□□□ 1.22
NFKB1-204ENST00000504044 ATP2B4P23634 1241 aa22.65■■□□□ 1.22
NFKB1-204ENST00000504044 CIAPIN1Q6FI81 312 aa22.65■■□□□ 1.22
NFKB1-204ENST00000504044 TBC1D16Q8TBP0 767 aa22.65■■□□□ 1.22
NFKB1-204ENST00000504044 ANKRD18BA2A2Z9 1011 aa22.64■■□□□ 1.21
NFKB1-204ENST00000504044 ITGA6P23229 1130 aa22.64■■□□□ 1.21
NFKB1-204ENST00000504044 EPHX2P34913 555 aa22.64■■□□□ 1.21
NFKB1-204ENST00000504044 CASP7P55210 303 aa22.64■■□□□ 1.21
NFKB1-204ENST00000504044 HNRNPUQ00839 825 aaKnown RBP eCLIP22.64■■□□□ 1.21
NFKB1-204ENST00000504044 CHADLQ6NUI6 762 aa22.64■■□□□ 1.21
NFKB1-204ENST00000504044 SLC51AQ86UW1 340 aa22.64■■□□□ 1.21
NFKB1-204ENST00000504044 LDHDQ86WU2 507 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms