RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 RARAP10276 462 aa8.38□□□□□ -1.07
SUB1-204ENST00000504016 SELPP16109 830 aa8.38□□□□□ -1.07
SUB1-204ENST00000504016 IFT43Q96FT9 208 aa8.38□□□□□ -1.07
SUB1-204ENST00000504016 C11orf16Q9NQ32 467 aa8.38□□□□□ -1.07
SUB1-204ENST00000504016 ZFATQ9P243 1243 aa8.38□□□□□ -1.07
SUB1-204ENST00000504016 NRG1Q02297 640 aaPredicted RBP8.37□□□□□ -1.07
SUB1-204ENST00000504016 MLLT1Q03111 559 aaPredicted RBP8.37□□□□□ -1.07
SUB1-204ENST00000504016 ADGRE1Q14246 886 aa8.37□□□□□ -1.07
SUB1-204ENST00000504016 ZMYM1Q5SVZ6 1142 aa8.37□□□□□ -1.07
SUB1-204ENST00000504016 ELMSAN1Q6PJG2 1045 aa8.37□□□□□ -1.07
SUB1-204ENST00000504016 SHISA2Q6UWI4 295 aa8.37□□□□□ -1.07
SUB1-204ENST00000504016 LENG1Q96BZ8 264 aaPredicted RBP8.37□□□□□ -1.07
SUB1-204ENST00000504016 NOVA2Q9UNW9 492 aaKnown RBP8.37□□□□□ -1.07
SUB1-204ENST00000504016 ZBTB42B2RXF5 422 aa8.36□□□□□ -1.07
SUB1-204ENST00000504016 DYRK3O43781 588 aa8.36□□□□□ -1.07
SUB1-204ENST00000504016 ARID4AP29374 1257 aaPredicted RBP8.36□□□□□ -1.07
SUB1-204ENST00000504016 MBTPS1Q14703 1052 aa8.36□□□□□ -1.07
SUB1-204ENST00000504016 FMR1NBQ8N0W7 255 aaPredicted RBP8.36□□□□□ -1.07
SUB1-204ENST00000504016 CMTR1Q8N1G2 835 aaKnown RBP8.36□□□□□ -1.07
SUB1-204ENST00000504016 TRPM4Q8TD43 1214 aa8.36□□□□□ -1.07
SUB1-204ENST00000504016 FRRS1LQ9P0K9 344 aa8.36□□□□□ -1.07
SUB1-204ENST00000504016 USP21Q9UK80 565 aa8.36□□□□□ -1.07
SUB1-204ENST00000504016 LRFN2Q9ULH4 789 aa8.36□□□□□ -1.07
SUB1-204ENST00000504016 USP20Q9Y2K6 914 aa8.36□□□□□ -1.07
SUB1-204ENST00000504016 RTCBQ9Y3I0 505 aaKnown RBP8.36□□□□□ -1.07
SUB1-204ENST00000504016 OPLAHO14841 1288 aa8.35□□□□□ -1.07
SUB1-204ENST00000504016 PERM1Q5SV97 790 aa8.35□□□□□ -1.07
SUB1-204ENST00000504016 MSL1Q68DK7 614 aa8.35□□□□□ -1.07
SUB1-204ENST00000504016 TXNRD3Q86VQ6 643 aa8.35□□□□□ -1.07
SUB1-204ENST00000504016 TREML1Q86YW5 311 aa8.35□□□□□ -1.07
SUB1-204ENST00000504016 PRIMPOLQ96LW4 560 aa8.35□□□□□ -1.07
SUB1-204ENST00000504016 LPIN3Q9BQK8 851 aa8.35□□□□□ -1.07
SUB1-204ENST00000504016 TIMELESSQ9UNS1 1208 aa8.35□□□□□ -1.07
SUB1-204ENST00000504016 GPLD1P80108 840 aa8.34□□□□□ -1.07
SUB1-204ENST00000504016 FKBP5Q13451 457 aaPredicted RBP8.34□□□□□ -1.07
SUB1-204ENST00000504016 HFE2Q6ZVN8 426 aa8.34□□□□□ -1.07
SUB1-204ENST00000504016 RGL4Q8IZJ4 473 aa8.34□□□□□ -1.07
SUB1-204ENST00000504016 PRMT3O60678 531 aa8.33□□□□□ -1.08
SUB1-204ENST00000504016 XYLBO75191 536 aa8.33□□□□□ -1.08
SUB1-204ENST00000504016 SWI5Q1ZZU3 235 aa8.33□□□□□ -1.08
SUB1-204ENST00000504016 COX20Q5RI15 118 aa8.33□□□□□ -1.08
SUB1-204ENST00000504016 WFDC8Q8IUA0 241 aa8.33□□□□□ -1.08
SUB1-204ENST00000504016 ZMYND15Q9H091 742 aa8.33□□□□□ -1.08
SUB1-204ENST00000504016 ACIN1Q9UKV3 1341 aaKnown RBP8.32□□□□□ -1.08
SUB1-204ENST00000504016 EGFRP00533 1210 aa8.32□□□□□ -1.08
SUB1-204ENST00000504016 NRLP54845 237 aa8.32□□□□□ -1.08
SUB1-204ENST00000504016 GRIK5Q16478 980 aa8.32□□□□□ -1.08
SUB1-204ENST00000504016 ILDR2Q71H61 639 aa8.32□□□□□ -1.08
SUB1-204ENST00000504016 DTWD1Q8N5C7 304 aa8.32□□□□□ -1.08
SUB1-204ENST00000504016 TTC9Q92623 222 aa8.32□□□□□ -1.08
SUB1-204ENST00000504016 SMG9Q9H0W8 520 aaKnown RBP8.32□□□□□ -1.08
SUB1-204ENST00000504016 TLR7Q9NYK1 1049 aaKnown RBP8.32□□□□□ -1.08
SUB1-204ENST00000504016 SCO2A0A1W2PP80 73 aa8.31□□□□□ -1.08
SUB1-204ENST00000504016 EIF2AK2P19525 551 aaKnown RBP8.31□□□□□ -1.08
SUB1-204ENST00000504016 PLAURQ03405 335 aa8.31□□□□□ -1.08
SUB1-204ENST00000504016 PRSS36Q5K4E3 855 aa8.31□□□□□ -1.08
SUB1-204ENST00000504016 FBXO11Q86XK2 927 aa8.31□□□□□ -1.08
SUB1-204ENST00000504016 TP53INP1Q96A56 240 aa8.31□□□□□ -1.08
SUB1-204ENST00000504016 PSAPP07602 524 aa8.3□□□□□ -1.08
SUB1-204ENST00000504016 H2AFB1P0C5Y9 115 aa8.3□□□□□ -1.08
SUB1-204ENST00000504016 H2AFB2P0C5Z0 115 aa8.3□□□□□ -1.08
SUB1-204ENST00000504016 BRD2P25440 801 aaKnown RBP8.29□□□□□ -1.08
SUB1-204ENST00000504016 ELOAQ14241 798 aaKnown RBP8.29□□□□□ -1.08
SUB1-204ENST00000504016 C16orf46Q6P387 395 aa8.29□□□□□ -1.08
SUB1-204ENST00000504016 ZMIZ1Q9ULJ6 1067 aa8.29□□□□□ -1.08
SUB1-204ENST00000504016 KCNMB2Q9Y691 235 aa8.29□□□□□ -1.08
SUB1-204ENST00000504016 LOC102724428A0A0B4J2F2 783 aa8.28□□□□□ -1.08
SUB1-204ENST00000504016 J3QW42 95 aa8.28□□□□□ -1.08
SUB1-204ENST00000504016 GHRHP01286 108 aa8.28□□□□□ -1.08
SUB1-204ENST00000504016 SIK1P57059 783 aa8.28□□□□□ -1.08
SUB1-204ENST00000504016 OCLNQ16625 522 aa8.28□□□□□ -1.08
SUB1-204ENST00000504016 STK32AQ8WU08 396 aa8.28□□□□□ -1.08
SUB1-204ENST00000504016 PLD4Q96BZ4 506 aa8.28□□□□□ -1.08
SUB1-204ENST00000504016 SAP130Q9H0E3 1048 aa8.28□□□□□ -1.08
SUB1-204ENST00000504016 MMP20O60882 483 aa8.27□□□□□ -1.09
SUB1-204ENST00000504016 IREB2P48200 963 aaKnown RBP8.27□□□□□ -1.09
SUB1-204ENST00000504016 FOXD4L6Q3SYB3 417 aaPredicted RBP8.27□□□□□ -1.09
SUB1-204ENST00000504016 IGF2-ASQ6U949 168 aa8.27□□□□□ -1.09
SUB1-204ENST00000504016 FOXD4L3Q6VB84 417 aaPredicted RBP8.27□□□□□ -1.09
SUB1-204ENST00000504016 ETFBKMTQ8IXQ9 262 aa8.27□□□□□ -1.09
SUB1-204ENST00000504016 WFDC12Q8WWY7 111 aa8.27□□□□□ -1.09
SUB1-204ENST00000504016 NSUN5Q96P11 429 aaKnown RBP8.27□□□□□ -1.09
SUB1-204ENST00000504016 RBSNQ9H1K0 784 aa8.27□□□□□ -1.09
SUB1-204ENST00000504016 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.26□□□□□ -1.09
SUB1-204ENST00000504016 ARID3CA6NKF2 412 aa8.26□□□□□ -1.09
SUB1-204ENST00000504016 SUPT5HO00267 1087 aaKnown RBP8.26□□□□□ -1.09
SUB1-204ENST00000504016 FAM69CQ0P6D2 419 aa8.26□□□□□ -1.09
SUB1-204ENST00000504016 GDF6Q6KF10 455 aaPredicted RBP8.26□□□□□ -1.09
SUB1-204ENST00000504016 MKNK1Q9BUB5 465 aa8.26□□□□□ -1.09
SUB1-204ENST00000504016 NAA30Q147X3 362 aaPredicted RBP8.25□□□□□ -1.09
SUB1-204ENST00000504016 NLRP13Q86W25 1043 aa8.25□□□□□ -1.09
SUB1-204ENST00000504016 PIK3R5Q8WYR1 880 aa8.25□□□□□ -1.09
SUB1-204ENST00000504016 COL26A1Q96A83 441 aa8.25□□□□□ -1.09
SUB1-204ENST00000504016 FAM13BQ9NYF5 915 aa8.25□□□□□ -1.09
SUB1-204ENST00000504016 DEAF1O75398 565 aaPredicted RBP8.24□□□□□ -1.09
SUB1-204ENST00000504016 SOX18P35713 384 aa8.24□□□□□ -1.09
SUB1-204ENST00000504016 CAPN12Q6ZSI9 719 aa8.24□□□□□ -1.09
SUB1-204ENST00000504016 IL22RA1Q8N6P7 574 aa8.24□□□□□ -1.09
SUB1-204ENST00000504016 SSBP4Q9BWG4 385 aaPredicted RBP8.24□□□□□ -1.09
SUB1-204ENST00000504016 CXXC1Q9P0U4 656 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms