RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 GPLD1P80108 840 aa8.86□□□□□ -0.99
UBE3D-205ENST00000503942 ELMSAN1Q6PJG2 1045 aa8.86□□□□□ -0.99
UBE3D-205ENST00000503942 DHX32Q7L7V1 743 aaKnown RBP8.86□□□□□ -0.99
UBE3D-205ENST00000503942 SLC51AQ86UW1 340 aa8.86□□□□□ -0.99
UBE3D-205ENST00000503942 CHMP7Q8WUX9 453 aaPredicted RBP8.86□□□□□ -0.99
UBE3D-205ENST00000503942 ZMYND15Q9H091 742 aa8.86□□□□□ -0.99
UBE3D-205ENST00000503942 PCMTD2Q9NV79 361 aa8.86□□□□□ -0.99
UBE3D-205ENST00000503942 COL17A1Q9UMD9 1497 aaPredicted RBP8.85□□□□□ -0.99
UBE3D-205ENST00000503942 ZBTB42B2RXF5 422 aa8.85□□□□□ -0.99
UBE3D-205ENST00000503942 DLL1O00548 723 aa8.85□□□□□ -0.99
UBE3D-205ENST00000503942 INPP5BP32019 993 aa8.85□□□□□ -0.99
UBE3D-205ENST00000503942 DZIP1LQ8IYY4 767 aaKnown RBP8.85□□□□□ -0.99
UBE3D-205ENST00000503942 FSTP19883 344 aa8.84□□□□□ -0.99
UBE3D-205ENST00000503942 IDH3AP50213 366 aa8.83□□□□□ -1
UBE3D-205ENST00000503942 SEC13P55735 322 aa8.83□□□□□ -1
UBE3D-205ENST00000503942 AKTIPQ9H8T0 292 aa8.83□□□□□ -1
UBE3D-205ENST00000503942 C11orf16Q9NQ32 467 aa8.83□□□□□ -1
UBE3D-205ENST00000503942 CD97P48960 835 aa8.82□□□□□ -1
UBE3D-205ENST00000503942 MLLT1Q03111 559 aaPredicted RBP8.82□□□□□ -1
UBE3D-205ENST00000503942 HDGFL1Q5TGJ6 251 aa8.82□□□□□ -1
UBE3D-205ENST00000503942 KRT25Q7Z3Z0 450 aa8.82□□□□□ -1
UBE3D-205ENST00000503942 IFT43Q96FT9 208 aa8.82□□□□□ -1
UBE3D-205ENST00000503942 PAX4O43316 350 aa8.81□□□□□ -1
UBE3D-205ENST00000503942 RAD21O60216 631 aa8.81□□□□□ -1
UBE3D-205ENST00000503942 RARAP10276 462 aa8.81□□□□□ -1
UBE3D-205ENST00000503942 TARSP26639 723 aaKnown RBP8.81□□□□□ -1
UBE3D-205ENST00000503942 SMG9Q9H0W8 520 aaKnown RBP8.81□□□□□ -1
UBE3D-205ENST00000503942 SUPT5HO00267 1087 aaKnown RBP8.8□□□□□ -1
UBE3D-205ENST00000503942 RASA1P20936 1047 aa8.8□□□□□ -1
UBE3D-205ENST00000503942 SSTR4P31391 388 aa8.8□□□□□ -1
UBE3D-205ENST00000503942 ARSDP51689 593 aa8.8□□□□□ -1
UBE3D-205ENST00000503942 NRLP54845 237 aa8.8□□□□□ -1
UBE3D-205ENST00000503942 TMEM130Q8N3G9 435 aa8.8□□□□□ -1
UBE3D-205ENST00000503942 CLUAP1Q96AJ1 413 aa8.8□□□□□ -1
UBE3D-205ENST00000503942 MRPL18Q9H0U6 180 aaKnown RBP8.8□□□□□ -1
UBE3D-205ENST00000503942 KLK14Q9P0G3 267 aa8.8□□□□□ -1
UBE3D-205ENST00000503942 F8W735 103 aaPredicted RBP8.79□□□□□ -1
UBE3D-205ENST00000503942 IGFBP4P22692 258 aa8.79□□□□□ -1
UBE3D-205ENST00000503942 ARID4AP29374 1257 aaPredicted RBP8.79□□□□□ -1
UBE3D-205ENST00000503942 Q6ZS46 218 aa8.79□□□□□ -1
UBE3D-205ENST00000503942 SASH3O75995 380 aa8.78□□□□□ -1
UBE3D-205ENST00000503942 ALX3O95076 343 aa8.78□□□□□ -1
UBE3D-205ENST00000503942 EIF2AK2P19525 551 aaKnown RBP8.78□□□□□ -1
UBE3D-205ENST00000503942 FMNL2Q96PY5 1086 aa8.78□□□□□ -1
UBE3D-205ENST00000503942 UBTFP17480 764 aaKnown RBP8.77□□□□□ -1.01
UBE3D-205ENST00000503942 TXKP42681 527 aa8.77□□□□□ -1.01
UBE3D-205ENST00000503942 HFE2Q6ZVN8 426 aa8.77□□□□□ -1.01
UBE3D-205ENST00000503942 SRA1Q9HD15 236 aaKnown RBP8.77□□□□□ -1.01
UBE3D-205ENST00000503942 A6NJR5 290 aa8.76□□□□□ -1.01
UBE3D-205ENST00000503942 MICAL2O94851 1124 aa8.76□□□□□ -1.01
UBE3D-205ENST00000503942 DGKZQ13574 1117 aa8.76□□□□□ -1.01
UBE3D-205ENST00000503942 PLD4Q96BZ4 506 aa8.76□□□□□ -1.01
UBE3D-205ENST00000503942 HINFPQ9BQA5 517 aa8.76□□□□□ -1.01
UBE3D-205ENST00000503942 QTRT2Q9H974 415 aaKnown RBP8.76□□□□□ -1.01
UBE3D-205ENST00000503942 TLR7Q9NYK1 1049 aaKnown RBP8.76□□□□□ -1.01
UBE3D-205ENST00000503942 KIAA1324LA8MWY0 1029 aaPredicted RBP8.75□□□□□ -1.01
UBE3D-205ENST00000503942 MAP4K3Q8IVH8 894 aa8.75□□□□□ -1.01
UBE3D-205ENST00000503942 DCAF11Q8TEB1 546 aa8.75□□□□□ -1.01
UBE3D-205ENST00000503942 MAFBQ9Y5Q3 323 aaPredicted RBP8.75□□□□□ -1.01
UBE3D-205ENST00000503942 LGR5O75473 907 aa8.74□□□□□ -1.01
UBE3D-205ENST00000503942 EGFRP00533 1210 aa8.74□□□□□ -1.01
UBE3D-205ENST00000503942 IRAK1P51617 712 aa8.74□□□□□ -1.01
UBE3D-205ENST00000503942 GSC2O15499 205 aa8.73□□□□□ -1.01
UBE3D-205ENST00000503942 PTCD1O75127 700 aaKnown RBP8.73□□□□□ -1.01
UBE3D-205ENST00000503942 LARP1Q6PKG0 1096 aaKnown RBP8.73□□□□□ -1.01
UBE3D-205ENST00000503942 RAXQ9Y2V3 346 aa8.73□□□□□ -1.01
UBE3D-205ENST00000503942 MED26O95402 600 aa8.72□□□□□ -1.01
UBE3D-205ENST00000503942 HOXD8P13378 290 aaPredicted RBP8.72□□□□□ -1.01
UBE3D-205ENST00000503942 DPYDQ12882 1025 aa8.72□□□□□ -1.01
UBE3D-205ENST00000503942 PTK7Q13308 1070 aa8.72□□□□□ -1.01
UBE3D-205ENST00000503942 SETDB1Q15047 1291 aa8.72□□□□□ -1.01
UBE3D-205ENST00000503942 CRTC2Q53ET0 693 aaPredicted RBP8.72□□□□□ -1.01
UBE3D-205ENST00000503942 IL22RA1Q8N6P7 574 aa8.72□□□□□ -1.01
UBE3D-205ENST00000503942 MYO19Q96H55 970 aa8.72□□□□□ -1.01
UBE3D-205ENST00000503942 TFIP11Q9UBB9 837 aaKnown RBP8.72□□□□□ -1.01
UBE3D-205ENST00000503942 RTCBQ9Y3I0 505 aaKnown RBP8.72□□□□□ -1.01
UBE3D-205ENST00000503942 OAS3Q9Y6K5 1087 aaKnown RBP8.72□□□□□ -1.01
UBE3D-205ENST00000503942 LOC102724428A0A0B4J2F2 783 aa8.71□□□□□ -1.02
UBE3D-205ENST00000503942 OPLAHO14841 1288 aa8.71□□□□□ -1.02
UBE3D-205ENST00000503942 IGLV1-40P01703 118 aa8.71□□□□□ -1.02
UBE3D-205ENST00000503942 GLB1P16278 677 aa8.71□□□□□ -1.02
UBE3D-205ENST00000503942 SIK1P57059 783 aa8.71□□□□□ -1.02
UBE3D-205ENST00000503942 GDF6Q6KF10 455 aaPredicted RBP8.71□□□□□ -1.02
UBE3D-205ENST00000503942 AGGF1Q8N302 714 aaeCLIP8.71□□□□□ -1.02
UBE3D-205ENST00000503942 FNBP4Q8N3X1 1017 aaPredicted RBP8.71□□□□□ -1.02
UBE3D-205ENST00000503942 C1orf115Q9H7X2 142 aa8.71□□□□□ -1.02
UBE3D-205ENST00000503942 J3QW42 95 aa8.7□□□□□ -1.02
UBE3D-205ENST00000503942 COBLO75128 1261 aa8.7□□□□□ -1.02
UBE3D-205ENST00000503942 XYLBO75191 536 aa8.7□□□□□ -1.02
UBE3D-205ENST00000503942 TGFB1P01137 390 aa8.7□□□□□ -1.02
UBE3D-205ENST00000503942 PSAPP07602 524 aa8.7□□□□□ -1.02
UBE3D-205ENST00000503942 YBX3P16989 372 aaKnown RBP eCLIP8.7□□□□□ -1.02
UBE3D-205ENST00000503942 C11orf91Q3C1V1 193 aa8.7□□□□□ -1.02
UBE3D-205ENST00000503942 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.7□□□□□ -1.02
UBE3D-205ENST00000503942 NSUN5Q96P11 429 aaKnown RBP8.7□□□□□ -1.02
UBE3D-205ENST00000503942 FOXO3O43524 673 aa8.69□□□□□ -1.02
UBE3D-205ENST00000503942 GHRHP01286 108 aa8.69□□□□□ -1.02
UBE3D-205ENST00000503942 WEE1P30291 646 aa8.69□□□□□ -1.02
UBE3D-205ENST00000503942 SOX18P35713 384 aa8.69□□□□□ -1.02
UBE3D-205ENST00000503942 GP2P55259 537 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms