RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 ZFYVE16Q7Z3T8 1539 aa18.66■□□□□ 0.58
HMGXB3-202ENST00000503427 HCLS1P14317 486 aaPredicted RBP18.66■□□□□ 0.58
HMGXB3-202ENST00000503427 ZNF76P36508 570 aa18.66■□□□□ 0.58
HMGXB3-202ENST00000503427 NBPF6Q5VWK0 638 aa18.66■□□□□ 0.58
HMGXB3-202ENST00000503427 JAKMIP3Q5VZ66 844 aa18.66■□□□□ 0.58
HMGXB3-202ENST00000503427 NBPF5PQ86XG9 351 aaPredicted RBP18.66■□□□□ 0.58
HMGXB3-202ENST00000503427 NBPF4Q96M43 638 aa18.66■□□□□ 0.58
HMGXB3-202ENST00000503427 GOLGA6L9A6NEM1 432 aa18.66■□□□□ 0.58
HMGXB3-202ENST00000503427 C6orf229H3BNL8 230 aa18.66■□□□□ 0.58
HMGXB3-202ENST00000503427 BAG3O95817 575 aa18.66■□□□□ 0.58
HMGXB3-202ENST00000503427 SEPT7Q16181 437 aaKnown RBP18.66■□□□□ 0.58
HMGXB3-202ENST00000503427 WWC2Q6AWC2 1192 aa18.66■□□□□ 0.58
HMGXB3-202ENST00000503427 LMBR1LQ6UX01 489 aa18.66■□□□□ 0.58
HMGXB3-202ENST00000503427 ATP6V1AP38606 617 aa18.66■□□□□ 0.58
HMGXB3-202ENST00000503427 SIRT1Q96EB6 747 aa18.66■□□□□ 0.58
HMGXB3-202ENST00000503427 RNMTO43148 476 aaKnown RBP18.65■□□□□ 0.58
HMGXB3-202ENST00000503427 PPP1R12BO60237 982 aaPredicted RBP18.65■□□□□ 0.58
HMGXB3-202ENST00000503427 IARSP41252 1262 aaKnown RBP18.65■□□□□ 0.58
HMGXB3-202ENST00000503427 TMC6Q7Z403 805 aa18.65■□□□□ 0.58
HMGXB3-202ENST00000503427 ORC3Q9UBD5 711 aaPredicted RBP18.65■□□□□ 0.58
HMGXB3-202ENST00000503427 IL13P35225 146 aa18.65■□□□□ 0.58
HMGXB3-202ENST00000503427 CATIPQ7Z7H3 387 aa18.65■□□□□ 0.58
HMGXB3-202ENST00000503427 C8orf37Q96NL8 207 aa18.65■□□□□ 0.58
HMGXB3-202ENST00000503427 PCDH11XQ9BZA7 1347 aa18.65■□□□□ 0.58
HMGXB3-202ENST00000503427 PCDH11YQ9BZA8 1340 aa18.65■□□□□ 0.58
HMGXB3-202ENST00000503427 FGFR1OPO95684 399 aaKnown RBP18.65■□□□□ 0.58
HMGXB3-202ENST00000503427 TMEM2Q9UHN6 1383 aa18.65■□□□□ 0.58
HMGXB3-202ENST00000503427 TSG101Q99816 390 aa18.65■□□□□ 0.58
HMGXB3-202ENST00000503427 DCTPP1Q9H773 170 aa18.65■□□□□ 0.58
HMGXB3-202ENST00000503427 ATP2B3Q16720 1220 aa18.65■□□□□ 0.58
HMGXB3-202ENST00000503427 CCDC82Q8N4S0 544 aa18.65■□□□□ 0.58
HMGXB3-202ENST00000503427 CNKSR2Q8WXI2 1034 aa18.65■□□□□ 0.58
HMGXB3-202ENST00000503427 RAB34Q9BZG1 259 aa18.65■□□□□ 0.58
HMGXB3-202ENST00000503427 INSRP06213 1382 aa18.65■□□□□ 0.58
HMGXB3-202ENST00000503427 YEATS4O95619 227 aa18.64■□□□□ 0.57
HMGXB3-202ENST00000503427 NCOA7Q8NI08 942 aa18.64■□□□□ 0.57
HMGXB3-202ENST00000503427 JARID2Q92833 1246 aaPredicted RBP18.64■□□□□ 0.57
HMGXB3-202ENST00000503427 MBD5Q9P267 1494 aa18.64■□□□□ 0.57
HMGXB3-202ENST00000503427 ANKRD18AQ8IVF6 992 aa18.64■□□□□ 0.57
HMGXB3-202ENST00000503427 PAXBP1Q9Y5B6 917 aa18.64■□□□□ 0.57
HMGXB3-202ENST00000503427 CCDC150Q8NCX0 1101 aa18.64■□□□□ 0.57
HMGXB3-202ENST00000503427 ZBTB40Q9NUA8 1239 aa18.64■□□□□ 0.57
HMGXB3-202ENST00000503427 SMC5Q8IY18 1101 aa18.63■□□□□ 0.57
HMGXB3-202ENST00000503427 ST5P78524 1137 aa18.63■□□□□ 0.57
HMGXB3-202ENST00000503427 ZRSR2Q15696 482 aaKnown RBP18.63■□□□□ 0.57
HMGXB3-202ENST00000503427 KANK3Q6NY19 840 aa18.63■□□□□ 0.57
HMGXB3-202ENST00000503427 GIMAP6Q6P9H5 292 aa18.63■□□□□ 0.57
HMGXB3-202ENST00000503427 CACNA2D4Q7Z3S7 1137 aa18.63■□□□□ 0.57
HMGXB3-202ENST00000503427 TAX1BP1Q86VP1 789 aa18.63■□□□□ 0.57
HMGXB3-202ENST00000503427 NUP88Q99567 741 aaPredicted RBP18.63■□□□□ 0.57
HMGXB3-202ENST00000503427 TTC41PQ6P2S7 1318 aa18.63■□□□□ 0.57
HMGXB3-202ENST00000503427 BIN1O00499 593 aa18.63■□□□□ 0.57
HMGXB3-202ENST00000503427 PTPRTO14522 1441 aa18.63■□□□□ 0.57
HMGXB3-202ENST00000503427 POTEB2H3BUK9 544 aa18.63■□□□□ 0.57
HMGXB3-202ENST00000503427 HOXB7P09629 217 aa18.63■□□□□ 0.57
HMGXB3-202ENST00000503427 PDE4BQ07343 736 aa18.63■□□□□ 0.57
HMGXB3-202ENST00000503427 SNW1Q13573 536 aaKnown RBP18.63■□□□□ 0.57
HMGXB3-202ENST00000503427 CEP85Q6P2H3 762 aa18.63■□□□□ 0.57
HMGXB3-202ENST00000503427 USO1O60763 962 aaKnown RBP18.62■□□□□ 0.57
HMGXB3-202ENST00000503427 CCDC194A0A1B0GVG4 234 aa18.62■□□□□ 0.57
HMGXB3-202ENST00000503427 CCDC102BQ68D86 513 aa18.62■□□□□ 0.57
HMGXB3-202ENST00000503427 SETDB2Q96T68 719 aa18.62■□□□□ 0.57
HMGXB3-202ENST00000503427 PYM1Q9BRP8 204 aaKnown RBP18.62■□□□□ 0.57
HMGXB3-202ENST00000503427 MFSD6Q6ZSS7 791 aa18.62■□□□□ 0.57
HMGXB3-202ENST00000503427 PLXNC1O60486 1568 aa18.62■□□□□ 0.57
HMGXB3-202ENST00000503427 ENOX2Q16206 610 aaKnown RBP18.62■□□□□ 0.57
HMGXB3-202ENST00000503427 KIF5BP33176 963 aa18.61■□□□□ 0.57
HMGXB3-202ENST00000503427 NLRP5P59047 1200 aa18.61■□□□□ 0.57
HMGXB3-202ENST00000503427 NLRP3Q96P20 1036 aa18.61■□□□□ 0.57
HMGXB3-202ENST00000503427 DDX21Q9NR30 783 aaKnown RBP eCLIP18.61■□□□□ 0.57
HMGXB3-202ENST00000503427 PLEKHG3A1L390 1219 aa18.61■□□□□ 0.57
HMGXB3-202ENST00000503427 RAB3GAP1Q15042 981 aa18.61■□□□□ 0.57
HMGXB3-202ENST00000503427 TMEM67Q5HYA8 995 aa18.61■□□□□ 0.57
HMGXB3-202ENST00000503427 USP48Q86UV5 1035 aa18.61■□□□□ 0.57
HMGXB3-202ENST00000503427 RLBP1P12271 317 aa18.61■□□□□ 0.57
HMGXB3-202ENST00000503427 METAP2P50579 478 aaKnown RBP eCLIP18.61■□□□□ 0.57
HMGXB3-202ENST00000503427 GSTO1P78417 241 aa18.61■□□□□ 0.57
HMGXB3-202ENST00000503427 VPS36Q86VN1 386 aa18.61■□□□□ 0.57
HMGXB3-202ENST00000503427 FAM200AQ8TCP9 573 aa18.61■□□□□ 0.57
HMGXB3-202ENST00000503427 CPLX3Q8WVH0 158 aa18.61■□□□□ 0.57
HMGXB3-202ENST00000503427 BRF1Q92994 677 aa18.61■□□□□ 0.57
HMGXB3-202ENST00000503427 KIF20AO95235 890 aa18.6■□□□□ 0.57
HMGXB3-202ENST00000503427 TMEM266Q2M3C6 531 aa18.6■□□□□ 0.57
HMGXB3-202ENST00000503427 SHTN1A0MZ66 631 aa18.6■□□□□ 0.57
HMGXB3-202ENST00000503427 PAFAH1B1P43034 410 aa18.6■□□□□ 0.57
HMGXB3-202ENST00000503427 ACSBG1Q96GR2 724 aa18.6■□□□□ 0.57
HMGXB3-202ENST00000503427 CNPY2Q9Y2B0 182 aa18.6■□□□□ 0.57
HMGXB3-202ENST00000503427 CCDC171Q6TFL3 1326 aa18.6■□□□□ 0.57
HMGXB3-202ENST00000503427 UTP14AQ9BVJ6 771 aaKnown RBP18.6■□□□□ 0.57
HMGXB3-202ENST00000503427 CEP135Q66GS9 1140 aa18.6■□□□□ 0.57
HMGXB3-202ENST00000503427 NECAB1Q8N987 351 aa18.6■□□□□ 0.57
HMGXB3-202ENST00000503427 CRNKL1Q9BZJ0 848 aaKnown RBP18.6■□□□□ 0.57
HMGXB3-202ENST00000503427 RBM8AQ9Y5S9 174 aaKnown RBP18.6■□□□□ 0.57
HMGXB3-202ENST00000503427 SBNO2Q9Y2G9 1366 aa18.6■□□□□ 0.57
HMGXB3-202ENST00000503427 KRT24Q2M2I5 525 aa18.59■□□□□ 0.57
HMGXB3-202ENST00000503427 CDCA7Q9BWT1 371 aaPredicted RBP18.59■□□□□ 0.57
HMGXB3-202ENST00000503427 DZIP3Q86Y13 1208 aaKnown RBP18.59■□□□□ 0.57
HMGXB3-202ENST00000503427 ZGPATQ8N5A5 531 aaKnown RBP18.59■□□□□ 0.57
HMGXB3-202ENST00000503427 CCDC12Q8WUD4 166 aaPredicted RBP18.59■□□□□ 0.57
HMGXB3-202ENST00000503427 CALRP27797 417 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms