RNA–Protein interactions for RNA: ENST00000503121.5

SYNE4-206, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-206ENST00000503121 DPP8Q6V1X1 898 aaPredicted RBP15.35■□□□□ 0.05
SYNE4-206ENST00000503121 TMC4Q7Z404 712 aa15.35■□□□□ 0.05
SYNE4-206ENST00000503121 LARGE2Q8N3Y3 721 aa15.35■□□□□ 0.05
SYNE4-206ENST00000503121 MPNDQ8N594 471 aa15.35■□□□□ 0.05
SYNE4-206ENST00000503121 DNAAF4Q8WXU2 420 aa15.35■□□□□ 0.05
SYNE4-206ENST00000503121 TIAM2Q8IVF5 1701 aa15.34■□□□□ 0.05
SYNE4-206ENST00000503121 NEURL1BA8MQ27 555 aa15.34■□□□□ 0.05
SYNE4-206ENST00000503121 PDE8AO60658 829 aa15.34■□□□□ 0.05
SYNE4-206ENST00000503121 CCDC152Q4G0S7 254 aa15.34■□□□□ 0.05
SYNE4-206ENST00000503121 SUPT20HQ8NEM7 779 aa15.34■□□□□ 0.05
SYNE4-206ENST00000503121 RBM46Q8TBY0 533 aaKnown RBP15.34■□□□□ 0.05
SYNE4-206ENST00000503121 CELF1Q92879 486 aaKnown RBP15.34■□□□□ 0.05
SYNE4-206ENST00000503121 DICER1Q9UPY3 1922 aaKnown RBP15.34■□□□□ 0.05
SYNE4-206ENST00000503121 SNED1Q8TER0 1413 aa15.34■□□□□ 0.05
SYNE4-206ENST00000503121 PPIP5K2O43314 1243 aa15.33■□□□□ 0.04
SYNE4-206ENST00000503121 RPS8P62241 208 aaKnown RBP15.33■□□□□ 0.04
SYNE4-206ENST00000503121 CCDC85AQ96PX6 553 aaPredicted RBP15.33■□□□□ 0.04
SYNE4-206ENST00000503121 LAMB2P55268 1798 aa15.33■□□□□ 0.04
SYNE4-206ENST00000503121 DDX60Q8IY21 1712 aaKnown RBP15.32■□□□□ 0.04
SYNE4-206ENST00000503121 FZD9O00144 591 aa15.32■□□□□ 0.04
SYNE4-206ENST00000503121 HSPA6P17066 643 aa15.32■□□□□ 0.04
SYNE4-206ENST00000503121 EIF6P56537 245 aaKnown RBP15.32■□□□□ 0.04
SYNE4-206ENST00000503121 SLFN5Q08AF3 891 aa15.32■□□□□ 0.04
SYNE4-206ENST00000503121 MIER1Q8N108 512 aa15.32■□□□□ 0.04
SYNE4-206ENST00000503121 LINS1Q8NG48 757 aa15.32■□□□□ 0.04
SYNE4-206ENST00000503121 SEC31BQ9NQW1 1179 aa15.32■□□□□ 0.04
SYNE4-206ENST00000503121 NSFL1CQ9UNZ2 370 aaKnown RBP15.32■□□□□ 0.04
SYNE4-206ENST00000503121 CDHR2Q9BYE9 1310 aa15.32■□□□□ 0.04
SYNE4-206ENST00000503121 ZNF541Q9H0D2 1346 aa15.32■□□□□ 0.04
SYNE4-206ENST00000503121 POTECB2RU33 542 aa15.31■□□□□ 0.04
SYNE4-206ENST00000503121 F6X3S4 739 aa15.31■□□□□ 0.04
SYNE4-206ENST00000503121 GCKRQ14397 625 aa15.31■□□□□ 0.04
SYNE4-206ENST00000503121 AOC3Q16853 763 aa15.31■□□□□ 0.04
SYNE4-206ENST00000503121 UBE3BQ7Z3V4 1068 aa15.31■□□□□ 0.04
SYNE4-206ENST00000503121 NIM1KQ8IY84 436 aa15.31■□□□□ 0.04
SYNE4-206ENST00000503121 CDCA7LQ96GN5 454 aa15.31■□□□□ 0.04
SYNE4-206ENST00000503121 VPS33BQ9H267 617 aa15.31■□□□□ 0.04
SYNE4-206ENST00000503121 H7C1W4 665 aa15.3■□□□□ 0.04
SYNE4-206ENST00000503121 CACNA1FO60840 1977 aa15.3■□□□□ 0.04
SYNE4-206ENST00000503121 TAF1P21675 1872 aa15.3■□□□□ 0.04
SYNE4-206ENST00000503121 FSTL1Q12841 308 aa15.3■□□□□ 0.04
SYNE4-206ENST00000503121 SMC1BQ8NDV3 1235 aa15.3■□□□□ 0.04
SYNE4-206ENST00000503121 RTFDC1Q9BY42 306 aaPredicted RBP15.3■□□□□ 0.04
SYNE4-206ENST00000503121 GJA3Q9Y6H8 435 aa15.3■□□□□ 0.04
SYNE4-206ENST00000503121 IQCA1LA6NCM1 817 aa15.29■□□□□ 0.04
SYNE4-206ENST00000503121 CTSWP56202 376 aa15.29■□□□□ 0.04
SYNE4-206ENST00000503121 SLC4A10Q6U841 1118 aa15.29■□□□□ 0.04
SYNE4-206ENST00000503121 GPC2Q8N158 579 aa15.29■□□□□ 0.04
SYNE4-206ENST00000503121 C6orf229H3BNL8 230 aa15.28■□□□□ 0.04
SYNE4-206ENST00000503121 GPSM2P81274 684 aa15.28■□□□□ 0.04
SYNE4-206ENST00000503121 ANKRD18AQ8IVF6 992 aa15.28■□□□□ 0.04
SYNE4-206ENST00000503121 TTLL11Q8NHH1 800 aa15.28■□□□□ 0.04
SYNE4-206ENST00000503121 L3MBTL3Q96JM7 780 aaPredicted RBP15.28■□□□□ 0.04
SYNE4-206ENST00000503121 WDR90Q96KV7 1748 aa15.27■□□□□ 0.04
SYNE4-206ENST00000503121 KIAA2012Q0VF49 1180 aa15.27■□□□□ 0.04
SYNE4-206ENST00000503121 WASHC4Q2M389 1173 aa15.27■□□□□ 0.04
SYNE4-206ENST00000503121 BEND3Q5T5X7 828 aa15.27■□□□□ 0.04
SYNE4-206ENST00000503121 MRPL50Q8N5N7 158 aaKnown RBP15.27■□□□□ 0.04
SYNE4-206ENST00000503121 CDC5LQ99459 802 aaKnown RBP15.27■□□□□ 0.04
SYNE4-206ENST00000503121 GREM2Q9H772 168 aa15.27■□□□□ 0.04
SYNE4-206ENST00000503121 ANKIB1Q9P2G1 1089 aa15.27■□□□□ 0.04
SYNE4-206ENST00000503121 HACL1Q9UJ83 578 aa15.27■□□□□ 0.04
SYNE4-206ENST00000503121 ZNRF3Q9ULT6 936 aa15.27■□□□□ 0.04
SYNE4-206ENST00000503121 RIMBP2O15034 1052 aa15.26■□□□□ 0.03
SYNE4-206ENST00000503121 TAF1DQ9H5J8 278 aaPredicted RBP15.26■□□□□ 0.03
SYNE4-206ENST00000503121 POLLQ9UGP5 575 aa15.26■□□□□ 0.03
SYNE4-206ENST00000503121 COL4A5P29400 1685 aa15.25■□□□□ 0.03
SYNE4-206ENST00000503121 LMOD1P29536 600 aaPredicted RBP15.25■□□□□ 0.03
SYNE4-206ENST00000503121 APLP1P51693 650 aa15.25■□□□□ 0.03
SYNE4-206ENST00000503121 CASP7P55210 303 aa15.25■□□□□ 0.03
SYNE4-206ENST00000503121 EAPPQ56P03 285 aaPredicted RBP15.25■□□□□ 0.03
SYNE4-206ENST00000503121 TRMT2AQ8IZ69 625 aaKnown RBP15.25■□□□□ 0.03
SYNE4-206ENST00000503121 SSH1Q8WYL5 1049 aa15.25■□□□□ 0.03
SYNE4-206ENST00000503121 EYA3Q99504 573 aa15.25■□□□□ 0.03
SYNE4-206ENST00000503121 PLA2G12BQ9BX93 195 aa15.25■□□□□ 0.03
SYNE4-206ENST00000503121 BCL2L13Q9BXK5 485 aa15.25■□□□□ 0.03
SYNE4-206ENST00000503121 SRCIN1Q9C0H9 1055 aa15.25■□□□□ 0.03
SYNE4-206ENST00000503121 C9orf78Q9NZ63 289 aaPredicted RBP15.25■□□□□ 0.03
SYNE4-206ENST00000503121 EPHX2P34913 555 aa15.24■□□□□ 0.03
SYNE4-206ENST00000503121 CXCL9Q07325 125 aa15.24■□□□□ 0.03
SYNE4-206ENST00000503121 TBC1D16Q8TBP0 767 aa15.24■□□□□ 0.03
SYNE4-206ENST00000503121 GGA1Q9UJY5 639 aa15.24■□□□□ 0.03
SYNE4-206ENST00000503121 COL4A1P02462 1669 aa15.24■□□□□ 0.03
SYNE4-206ENST00000503121 G3V3G9 751 aa15.23■□□□□ 0.03
SYNE4-206ENST00000503121 GRM8O00222 908 aa15.23■□□□□ 0.03
SYNE4-206ENST00000503121 ALDH1L1O75891 902 aa15.23■□□□□ 0.03
SYNE4-206ENST00000503121 UFL1O94874 794 aa15.23■□□□□ 0.03
SYNE4-206ENST00000503121 POTEIP0CG38 1075 aa15.23■□□□□ 0.03
SYNE4-206ENST00000503121 POTEJP0CG39 1038 aa15.23■□□□□ 0.03
SYNE4-206ENST00000503121 ITGA6P23229 1130 aa15.23■□□□□ 0.03
SYNE4-206ENST00000503121 IGHMBP2P38935 993 aaKnown RBP15.23■□□□□ 0.03
SYNE4-206ENST00000503121 ALDH1L2Q3SY69 923 aa15.23■□□□□ 0.03
SYNE4-206ENST00000503121 DCAF8Q5TAQ9 597 aa15.23■□□□□ 0.03
SYNE4-206ENST00000503121 CIAPIN1Q6FI81 312 aa15.23■□□□□ 0.03
SYNE4-206ENST00000503121 CHADLQ6NUI6 762 aa15.23■□□□□ 0.03
SYNE4-206ENST00000503121 PNMA8AQ86V59 439 aaPredicted RBP15.23■□□□□ 0.03
SYNE4-206ENST00000503121 GPR101Q96P66 508 aaPredicted RBP15.23■□□□□ 0.03
SYNE4-206ENST00000503121 ZC3H12CQ9C0D7 883 aaKnown RBP15.23■□□□□ 0.03
SYNE4-206ENST00000503121 SMC4Q9NTJ3 1288 aa15.23■□□□□ 0.03
SYNE4-206ENST00000503121 BSDC1Q9NW68 430 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms