RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 PPIP5K2O43314 1243 aa9.34□□□□□ -0.91
SH3RF1-202ENST00000502315 GPTP24298 496 aa9.34□□□□□ -0.91
SH3RF1-202ENST00000502315 CALD1Q05682 793 aaKnown RBP9.34□□□□□ -0.91
SH3RF1-202ENST00000502315 SF3B3Q15393 1217 aaKnown RBP9.34□□□□□ -0.91
SH3RF1-202ENST00000502315 COPS6Q7L5N1 327 aa9.34□□□□□ -0.91
SH3RF1-202ENST00000502315 NLRP10Q86W26 655 aa9.34□□□□□ -0.91
SH3RF1-202ENST00000502315 MPNDQ8N594 471 aa9.34□□□□□ -0.91
SH3RF1-202ENST00000502315 PLBD2Q8NHP8 589 aa9.34□□□□□ -0.91
SH3RF1-202ENST00000502315 RUNDC1Q96C34 613 aa9.34□□□□□ -0.91
SH3RF1-202ENST00000502315 BEGAINQ9BUH8 593 aa9.34□□□□□ -0.91
SH3RF1-202ENST00000502315 DBF4Q9UBU7 674 aaPredicted RBP9.34□□□□□ -0.91
SH3RF1-202ENST00000502315 DLG5Q8TDM6 1919 aa9.34□□□□□ -0.91
SH3RF1-202ENST00000502315 RPS12P25398 132 aaKnown RBP9.33□□□□□ -0.92
SH3RF1-202ENST00000502315 GRAPQ13588 217 aa9.33□□□□□ -0.92
SH3RF1-202ENST00000502315 MAP1SQ66K74 1059 aaPredicted RBP9.33□□□□□ -0.92
SH3RF1-202ENST00000502315 CIAPIN1Q6FI81 312 aa9.33□□□□□ -0.92
SH3RF1-202ENST00000502315 OLFM4Q6UX06 510 aa9.33□□□□□ -0.92
SH3RF1-202ENST00000502315 DPP8Q6V1X1 898 aaPredicted RBP9.33□□□□□ -0.92
SH3RF1-202ENST00000502315 ANKRD13DQ6ZTN6 518 aa9.33□□□□□ -0.92
SH3RF1-202ENST00000502315 GRAPLQ8TC17 118 aaPredicted RBP9.33□□□□□ -0.92
SH3RF1-202ENST00000502315 HYPKQ9NX55 129 aa9.33□□□□□ -0.92
SH3RF1-202ENST00000502315 TRMT112Q9UI30 125 aaKnown RBP9.33□□□□□ -0.92
SH3RF1-202ENST00000502315 GJA3Q9Y6H8 435 aa9.33□□□□□ -0.92
SH3RF1-202ENST00000502315 TLL2Q9Y6L7 1015 aa9.33□□□□□ -0.92
SH3RF1-202ENST00000502315 CACNA1SQ13698 1873 aa9.33□□□□□ -0.92
SH3RF1-202ENST00000502315 ABCC4O15439 1325 aa9.32□□□□□ -0.92
SH3RF1-202ENST00000502315 MYBBP1AQ9BQG0 1328 aaKnown RBP9.32□□□□□ -0.92
SH3RF1-202ENST00000502315 H7C1D1 291 aa9.32□□□□□ -0.92
SH3RF1-202ENST00000502315 EIF2S2P20042 333 aaKnown RBP9.32□□□□□ -0.92
SH3RF1-202ENST00000502315 EPS15P42566 896 aa9.32□□□□□ -0.92
SH3RF1-202ENST00000502315 MMP14P50281 582 aa9.32□□□□□ -0.92
SH3RF1-202ENST00000502315 CXCL9Q07325 125 aa9.32□□□□□ -0.92
SH3RF1-202ENST00000502315 CDC37L1Q7L3B6 337 aa9.32□□□□□ -0.92
SH3RF1-202ENST00000502315 CFAP44Q96MT7 982 aa9.32□□□□□ -0.92
SH3RF1-202ENST00000502315 ABT1Q9ULW3 272 aaKnown RBP9.32□□□□□ -0.92
SH3RF1-202ENST00000502315 AOC3Q16853 763 aa9.31□□□□□ -0.92
SH3RF1-202ENST00000502315 CST9Q5W186 159 aa9.31□□□□□ -0.92
SH3RF1-202ENST00000502315 SAPCD2Q86UD0 394 aa9.31□□□□□ -0.92
SH3RF1-202ENST00000502315 XAGE3Q8WTP9 111 aa9.31□□□□□ -0.92
SH3RF1-202ENST00000502315 GPR101Q96P66 508 aaPredicted RBP9.31□□□□□ -0.92
SH3RF1-202ENST00000502315 EYA3Q99504 573 aa9.31□□□□□ -0.92
SH3RF1-202ENST00000502315 THUMPD2Q9BTF0 503 aaKnown RBP9.31□□□□□ -0.92
SH3RF1-202ENST00000502315 ISCA1Q9BUE6 129 aa9.31□□□□□ -0.92
SH3RF1-202ENST00000502315 ANKRD36CQ5JPF3 1778 aa9.31□□□□□ -0.92
SH3RF1-202ENST00000502315 BRPF1P55201 1214 aaPredicted RBP9.3□□□□□ -0.92
SH3RF1-202ENST00000502315 WDR43Q15061 677 aaKnown RBP eCLIP9.3□□□□□ -0.92
SH3RF1-202ENST00000502315 REM2Q8IYK8 340 aaPredicted RBP9.3□□□□□ -0.92
SH3RF1-202ENST00000502315 PIP4P2Q8N4L2 257 aa9.3□□□□□ -0.92
SH3RF1-202ENST00000502315 CAPNS2Q96L46 248 aa9.3□□□□□ -0.92
SH3RF1-202ENST00000502315 PODXL2Q9NZ53 605 aa9.3□□□□□ -0.92
SH3RF1-202ENST00000502315 HSPA8P11142 646 aaKnown RBP9.29□□□□□ -0.92
SH3RF1-202ENST00000502315 LBX1P52954 281 aa9.29□□□□□ -0.92
SH3RF1-202ENST00000502315 NOGQ13253 232 aa9.29□□□□□ -0.92
SH3RF1-202ENST00000502315 WASHC4Q2M389 1173 aa9.29□□□□□ -0.92
SH3RF1-202ENST00000502315 HDGFL1Q5TGJ6 251 aa9.29□□□□□ -0.92
SH3RF1-202ENST00000502315 ZBTB38Q8NAP3 1195 aaPredicted RBP9.29□□□□□ -0.92
SH3RF1-202ENST00000502315 BCL2L13Q9BXK5 485 aa9.29□□□□□ -0.92
SH3RF1-202ENST00000502315 CNOT7Q9UIV1 285 aaKnown RBP9.29□□□□□ -0.92
SH3RF1-202ENST00000502315 TRIM35Q9UPQ4 493 aa9.29□□□□□ -0.92
SH3RF1-202ENST00000502315 TRPM7Q96QT4 1865 aa9.28□□□□□ -0.92
SH3RF1-202ENST00000502315 THSD7BQ9C0I4 1608 aa9.28□□□□□ -0.92
SH3RF1-202ENST00000502315 HCLS1P14317 486 aaPredicted RBP9.28□□□□□ -0.92
SH3RF1-202ENST00000502315 RGS19P49795 217 aa9.28□□□□□ -0.92
SH3RF1-202ENST00000502315 GMPSP49915 693 aaPredicted RBP9.28□□□□□ -0.92
SH3RF1-202ENST00000502315 RPS8P62241 208 aaKnown RBP9.28□□□□□ -0.92
SH3RF1-202ENST00000502315 AIMP1Q12904 312 aaKnown RBP9.28□□□□□ -0.92
SH3RF1-202ENST00000502315 PROSER3Q2NL68 480 aa9.28□□□□□ -0.92
SH3RF1-202ENST00000502315 C3orf67Q6ZVT6 689 aa9.28□□□□□ -0.92
SH3RF1-202ENST00000502315 CCDC191Q8NCU4 936 aa9.28□□□□□ -0.92
SH3RF1-202ENST00000502315 IFT57Q9NWB7 429 aa9.28□□□□□ -0.92
SH3RF1-202ENST00000502315 ZNF609O15014 1411 aa9.28□□□□□ -0.92
SH3RF1-202ENST00000502315 COL4A5P29400 1685 aa9.27□□□□□ -0.93
SH3RF1-202ENST00000502315 DDX58O95786 925 aaKnown RBP9.27□□□□□ -0.93
SH3RF1-202ENST00000502315 ZNF853P0CG23 659 aa9.27□□□□□ -0.93
SH3RF1-202ENST00000502315 GNAI1P63096 354 aa9.27□□□□□ -0.93
SH3RF1-202ENST00000502315 CCDC102AQ96A19 550 aa9.27□□□□□ -0.93
SH3RF1-202ENST00000502315 SAGE1Q9NXZ1 904 aa9.27□□□□□ -0.93
SH3RF1-202ENST00000502315 CHPF2Q9P2E5 772 aa9.27□□□□□ -0.93
SH3RF1-202ENST00000502315 LTBP1Q14766 1721 aa9.27□□□□□ -0.93
SH3RF1-202ENST00000502315 CELF2O95319 508 aaKnown RBP9.26□□□□□ -0.93
SH3RF1-202ENST00000502315 VIL1P09327 827 aaKnown RBP9.26□□□□□ -0.93
SH3RF1-202ENST00000502315 FKBP1BP68106 108 aa9.26□□□□□ -0.93
SH3RF1-202ENST00000502315 GOLGA2Q08379 1002 aa9.26□□□□□ -0.93
SH3RF1-202ENST00000502315 CCDC152Q4G0S7 254 aa9.26□□□□□ -0.93
SH3RF1-202ENST00000502315 DUSP27Q5VZP5 1158 aa9.26□□□□□ -0.93
SH3RF1-202ENST00000502315 AGBL3Q8NEM8 1001 aa9.26□□□□□ -0.93
SH3RF1-202ENST00000502315 ZC3H12CQ9C0D7 883 aaKnown RBP9.26□□□□□ -0.93
SH3RF1-202ENST00000502315 NSFL1CQ9UNZ2 370 aaKnown RBP9.26□□□□□ -0.93
SH3RF1-202ENST00000502315 LRRC37AA6NMS7 1700 aa9.25□□□□□ -0.93
SH3RF1-202ENST00000502315 YDJCA8MPS7 323 aa9.25□□□□□ -0.93
SH3RF1-202ENST00000502315 IRS4O14654 1257 aaPredicted RBP9.25□□□□□ -0.93
SH3RF1-202ENST00000502315 TCERG1O14776 1098 aaKnown RBP9.25□□□□□ -0.93
SH3RF1-202ENST00000502315 PDE8AO60658 829 aa9.25□□□□□ -0.93
SH3RF1-202ENST00000502315 RAD17O75943 681 aa9.25□□□□□ -0.93
SH3RF1-202ENST00000502315 ANXA1P04083 346 aa9.25□□□□□ -0.93
SH3RF1-202ENST00000502315 PCCAP05165 728 aaPredicted RBP9.25□□□□□ -0.93
SH3RF1-202ENST00000502315 HIRAP54198 1017 aaPredicted RBP9.25□□□□□ -0.93
SH3RF1-202ENST00000502315 CCDC30Q5VVM6 783 aa9.25□□□□□ -0.93
SH3RF1-202ENST00000502315 CYP4F22Q6NT55 531 aa9.25□□□□□ -0.93
SH3RF1-202ENST00000502315 RIC3Q7Z5B4 369 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms