RNA–Protein interactions for RNA: ENST00000501412.2

RAP1B-213, Transcript of RAP1B, member of RAS oncogene family, human

TSL 2

Gene RAP1B, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-213	ENST00000501412	TNRC6C	Q9HCJ0	1690 aa	Known RBP	27.66	■■■□□ 2.02
RAP1B-213	ENST00000501412	C3orf67	Q6ZVT6	689 aa		27.66	■■■□□ 2.02
RAP1B-213	ENST00000501412	CNBD1	Q8NA66	436 aa		27.66	■■■□□ 2.02
RAP1B-213	ENST00000501412	SLC16A10	Q8TF71	515 aa		27.66	■■■□□ 2.02
RAP1B-213	ENST00000501412	NOP58	Q9Y2X3	529 aa	Known RBP	27.66	■■■□□ 2.02
RAP1B-213	ENST00000501412	MMP10	P09238	476 aa		27.65	■■■□□ 2.02
RAP1B-213	ENST00000501412	GTF2E1	P29083	439 aa	Predicted RBP	27.64	■■■□□ 2.02
RAP1B-213	ENST00000501412	PTPN12	Q05209	780 aa	Known RBP	27.64	■■■□□ 2.02
RAP1B-213	ENST00000501412	FAM161A	Q3B820	660 aa		27.64	■■■□□ 2.02
RAP1B-213	ENST00000501412	COPRS	Q9NQ92	184 aa		27.64	■■■□□ 2.02
RAP1B-213	ENST00000501412	RTL9	Q8NET4	1388 aa		27.64	■■■□□ 2.01
RAP1B-213	ENST00000501412	SF3B3	Q15393	1217 aa	Known RBP	27.64	■■■□□ 2.01
RAP1B-213	ENST00000501412	CCDC24	Q8N4L8	307 aa		27.64	■■■□□ 2.01
RAP1B-213	ENST00000501412	GREM2	Q9H772	168 aa		27.64	■■■□□ 2.01
RAP1B-213	ENST00000501412	PA2G4	Q9UQ80	394 aa	Known RBP	27.64	■■■□□ 2.01
RAP1B-213	ENST00000501412	EXOC6B	Q9Y2D4	811 aa		27.63	■■■□□ 2.01
RAP1B-213	ENST00000501412	KLHDC4	Q8TBB5	520 aa		27.62	■■■□□ 2.01
RAP1B-213	ENST00000501412	CHMP3	Q9Y3E7	222 aa		27.62	■■■□□ 2.01
RAP1B-213	ENST00000501412	CCDC85A	Q96PX6	553 aa	Predicted RBP	27.61	■■■□□ 2.01
RAP1B-213	ENST00000501412	ANKRD31	Q8N7Z5	1873 aa		27.6	■■■□□ 2.01
RAP1B-213	ENST00000501412	SURF6	O75683	361 aa	Known RBP	27.6	■■■□□ 2.01
RAP1B-213	ENST00000501412	NUCB1	Q02818	461 aa		27.6	■■■□□ 2.01
RAP1B-213	ENST00000501412	PDZRN3	Q9UPQ7	1066 aa		27.6	■■■□□ 2.01
RAP1B-213	ENST00000501412	PARP3	Q9Y6F1	533 aa		27.6	■■■□□ 2.01
RAP1B-213	ENST00000501412	ITGA6	P23229	1130 aa		27.59	■■■□□ 2.01
RAP1B-213	ENST00000501412	CCDC152	Q4G0S7	254 aa		27.59	■■■□□ 2.01
RAP1B-213	ENST00000501412	ST5	P78524	1137 aa		27.58	■■■□□ 2.01
RAP1B-213	ENST00000501412	IFIT5	Q13325	482 aa	Known RBP	27.58	■■■□□ 2.01
RAP1B-213	ENST00000501412	CCDC57	Q2TAC2	916 aa		27.58	■■■□□ 2.01
RAP1B-213	ENST00000501412	NLRP3	Q96P20	1036 aa		27.58	■■■□□ 2.01
RAP1B-213	ENST00000501412	COL4A1	P02462	1669 aa		27.58	■■■□□ 2.01
RAP1B-213	ENST00000501412	KLRG2	A4D1S0	409 aa	Predicted RBP	27.57	■■■□□ 2
RAP1B-213	ENST00000501412	NPHP1	O15259	732 aa		27.57	■■■□□ 2
RAP1B-213	ENST00000501412	RAB11FIP3	O75154	756 aa		27.57	■■■□□ 2
RAP1B-213	ENST00000501412	ZNF594	Q96JF6	807 aa	Predicted RBP	27.57	■■■□□ 2
RAP1B-213	ENST00000501412	ANKRD18B	A2A2Z9	1011 aa		27.56	■■■□□ 2
RAP1B-213	ENST00000501412	CRY2	Q49AN0	593 aa		27.56	■■■□□ 2
RAP1B-213	ENST00000501412	HSP90AB4P	Q58FF6	505 aa		27.56	■■■□□ 2
RAP1B-213	ENST00000501412	SEC31B	Q9NQW1	1179 aa		27.56	■■■□□ 2
RAP1B-213	ENST00000501412	ANKRD45	Q5TZF3	282 aa		27.55	■■■□□ 2
RAP1B-213	ENST00000501412	CHD1L	Q86WJ1	897 aa		27.55	■■■□□ 2
RAP1B-213	ENST00000501412	SKAP1	Q86WV1	359 aa		27.55	■■■□□ 2
RAP1B-213	ENST00000501412	ATG9A	Q7Z3C6	839 aa		27.54	■■■□□ 2
RAP1B-213	ENST00000501412	SIL1	Q9H173	461 aa		27.54	■■■□□ 2
RAP1B-213	ENST00000501412	SASH1	O94885	1247 aa		27.53	■■■□□ 2
RAP1B-213	ENST00000501412	BRIP1	Q9BX63	1249 aa		27.53	■■■□□ 2
RAP1B-213	ENST00000501412	FBXO3	Q9UK99	471 aa		27.53	■■■□□ 2
RAP1B-213	ENST00000501412	EYA2	O00167	538 aa		27.52	■■■□□ 2
RAP1B-213	ENST00000501412	CIAO1	O76071	339 aa		27.52	■■■□□ 2
RAP1B-213	ENST00000501412	G3BP1	Q13283	466 aa	Known RBP eCLIP	27.52	■■■□□ 2
RAP1B-213	ENST00000501412	RHPN1	Q8TCX5	695 aa		27.52	■■■□□ 2
RAP1B-213	ENST00000501412	MTFR1L	Q9H019	292 aa		27.52	■■■□□ 2
RAP1B-213	ENST00000501412	TAF1	P21675	1872 aa		27.52	■■■□□ 2
RAP1B-213	ENST00000501412	APBB1	O00213	710 aa		27.51	■■■□□ 2
RAP1B-213	ENST00000501412	ZBTB7A	O95365	584 aa		27.51	■■■□□ 2
RAP1B-213	ENST00000501412	LRRC24	Q50LG9	513 aa		27.51	■■■□□ 2
RAP1B-213	ENST00000501412	KIF1BP	Q96EK5	621 aa		27.51	■■■□□ 2
RAP1B-213	ENST00000501412	PUS3	Q9BZE2	481 aa	Known RBP	27.51	■■■□□ 2
RAP1B-213	ENST00000501412	LRRCC1	Q9C099	1032 aa		27.51	■■■□□ 2
RAP1B-213	ENST00000501412	LNPK	Q9C0E8	428 aa		27.51	■■■□□ 2
RAP1B-213	ENST00000501412	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	27.51	■■■□□ 2
RAP1B-213	ENST00000501412	SMARCA5	O60264	1052 aa	Predicted RBP	27.51	■■□□□ 1.99
RAP1B-213	ENST00000501412	PDE4A	P27815	886 aa		27.51	■■□□□ 1.99
RAP1B-213	ENST00000501412	ERC1	Q8IUD2	1116 aa		27.51	■■□□□ 1.99
RAP1B-213	ENST00000501412	SPON1	Q9HCB6	807 aa		27.51	■■□□□ 1.99
RAP1B-213	ENST00000501412	RIPOR2	Q9Y4F9	1068 aa		27.5	■■□□□ 1.99
RAP1B-213	ENST00000501412	SPEF2	Q9C093	1822 aa		27.48	■■□□□ 1.99
RAP1B-213	ENST00000501412	COL11A2	P13942	1736 aa	Predicted RBP	27.48	■■□□□ 1.99
RAP1B-213	ENST00000501412	IL15	P40933	162 aa	Predicted RBP	27.48	■■□□□ 1.99
RAP1B-213	ENST00000501412	OS9	Q13438	667 aa	Predicted RBP	27.48	■■□□□ 1.99
RAP1B-213	ENST00000501412	TAF7L	Q5H9L4	462 aa		27.48	■■□□□ 1.99
RAP1B-213	ENST00000501412	C10orf71	Q711Q0	1435 aa		27.48	■■□□□ 1.99
RAP1B-213	ENST00000501412	CDC5L	Q99459	802 aa	Known RBP	27.48	■■□□□ 1.99
RAP1B-213	ENST00000501412	HOXA10	P31260	410 aa	Predicted RBP	27.47	■■□□□ 1.99
RAP1B-213	ENST00000501412	CELF1	Q92879	486 aa	Known RBP	27.47	■■□□□ 1.99
RAP1B-213	ENST00000501412	SGIP1	Q9BQI5	828 aa		27.47	■■□□□ 1.99
RAP1B-213	ENST00000501412	LDHAL6A	Q6ZMR3	332 aa		27.46	■■□□□ 1.99
RAP1B-213	ENST00000501412	IL1RAPL2	Q9NP60	686 aa		27.45	■■□□□ 1.99
RAP1B-213	ENST00000501412	ATF5	Q9Y2D1	282 aa	Predicted RBP	27.45	■■□□□ 1.99
RAP1B-213	ENST00000501412	KIF13B	Q9NQT8	1826 aa		27.45	■■□□□ 1.99
RAP1B-213	ENST00000501412	PDE6B	P35913	854 aa		27.44	■■□□□ 1.98
RAP1B-213	ENST00000501412	TFCP2	Q12800	502 aa		27.44	■■□□□ 1.98
RAP1B-213	ENST00000501412	DDX46	Q7L014	1031 aa	Known RBP	27.44	■■□□□ 1.98
RAP1B-213	ENST00000501412	C16orf71	Q8IYS4	520 aa	Predicted RBP	27.44	■■□□□ 1.98
RAP1B-213	ENST00000501412	SALL3	Q9BXA9	1300 aa		27.44	■■□□□ 1.98
RAP1B-213	ENST00000501412	SRGN	P10124	158 aa		27.44	■■□□□ 1.98
RAP1B-213	ENST00000501412	IGHMBP2	P38935	993 aa	Known RBP	27.44	■■□□□ 1.98
RAP1B-213	ENST00000501412	ANKRD18A	Q8IVF6	992 aa		27.44	■■□□□ 1.98
RAP1B-213	ENST00000501412	VGLL2	Q8N8G2	317 aa		27.44	■■□□□ 1.98
RAP1B-213	ENST00000501412	RPS8	P62241	208 aa	Known RBP	27.43	■■□□□ 1.98
RAP1B-213	ENST00000501412	GRAP	Q13588	217 aa		27.43	■■□□□ 1.98
RAP1B-213	ENST00000501412	GRAPL	Q8TC17	118 aa	Predicted RBP	27.43	■■□□□ 1.98
RAP1B-213	ENST00000501412	OTUD7A	Q8TE49	926 aa	Predicted RBP	27.43	■■□□□ 1.98
RAP1B-213	ENST00000501412	RPGR	Q92834	1020 aa	Known RBP	27.43	■■□□□ 1.98
RAP1B-213	ENST00000501412	BSDC1	Q9NW68	430 aa	Predicted RBP	27.43	■■□□□ 1.98
RAP1B-213	ENST00000501412		A0A1B0GUL6	1792 aa		27.42	■■□□□ 1.98
RAP1B-213	ENST00000501412	CRAMP1	Q96RY5	1269 aa		27.42	■■□□□ 1.98
RAP1B-213	ENST00000501412	MPHOSPH8	Q99549	860 aa		27.42	■■□□□ 1.98
RAP1B-213	ENST00000501412	CNNM1	Q9NRU3	951 aa		27.42	■■□□□ 1.98
RAP1B-213	ENST00000501412	PTGER2	P43116	358 aa		27.41	■■□□□ 1.98

Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms