RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	PIM2	Q9P1W9	311 aa		13.89	□□□□□ -0.19
CDK11A-222	ENST00000498810	COL11A2	P13942	1736 aa	Predicted RBP	13.89	□□□□□ -0.19
CDK11A-222	ENST00000498810	CAMTA2	O94983	1202 aa		13.88	□□□□□ -0.19
CDK11A-222	ENST00000498810	EIF2S2	P20042	333 aa	Known RBP	13.88	□□□□□ -0.19
CDK11A-222	ENST00000498810	CALD1	Q05682	793 aa	Known RBP	13.88	□□□□□ -0.19
CDK11A-222	ENST00000498810	DALRD3	Q5D0E6	543 aa	Known RBP	13.88	□□□□□ -0.19
CDK11A-222	ENST00000498810	BABAM1	Q9NWV8	329 aa		13.88	□□□□□ -0.19
CDK11A-222	ENST00000498810	GOLGB1	Q14789	3259 aa	Known RBP	13.88	□□□□□ -0.19
CDK11A-222	ENST00000498810	ANKRD36C	Q5JPF3	1778 aa		13.88	□□□□□ -0.19
CDK11A-222	ENST00000498810	APAF1	O14727	1248 aa		13.87	□□□□□ -0.19
CDK11A-222	ENST00000498810	GTF2E1	P29083	439 aa	Predicted RBP	13.87	□□□□□ -0.19
CDK11A-222	ENST00000498810	CHRNA5	P30532	468 aa		13.87	□□□□□ -0.19
CDK11A-222	ENST00000498810	ARHGAP27	Q6ZUM4	889 aa		13.87	□□□□□ -0.19
CDK11A-222	ENST00000498810	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.87	□□□□□ -0.19
CDK11A-222	ENST00000498810	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.87	□□□□□ -0.19
CDK11A-222	ENST00000498810	ADAM33	Q9BZ11	813 aa		13.87	□□□□□ -0.19
CDK11A-222	ENST00000498810	PCDHGA10	Q9Y5H3	936 aa		13.87	□□□□□ -0.19
CDK11A-222	ENST00000498810	FAM177B	A6PVY3	158 aa		13.86	□□□□□ -0.19
CDK11A-222	ENST00000498810		H0YIN7	160 aa		13.86	□□□□□ -0.19
CDK11A-222	ENST00000498810	C2CD5	Q86YS7	1000 aa		13.86	□□□□□ -0.19
CDK11A-222	ENST00000498810	NECTIN2	Q92692	538 aa		13.86	□□□□□ -0.19
CDK11A-222	ENST00000498810	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
CDK11A-222	ENST00000498810	ERBB4	Q15303	1308 aa		13.86	□□□□□ -0.19
CDK11A-222	ENST00000498810	ARFGEF2	Q9Y6D5	1785 aa		13.86	□□□□□ -0.19
CDK11A-222	ENST00000498810	NBPF26	B4DH59	902 aa		13.85	□□□□□ -0.19
CDK11A-222	ENST00000498810	PTPRE	P23469	700 aa		13.85	□□□□□ -0.19
CDK11A-222	ENST00000498810	PDE6B	P35913	854 aa		13.85	□□□□□ -0.19
CDK11A-222	ENST00000498810	NBPF10	Q6P3W6	841 aa	Known RBP	13.85	□□□□□ -0.19
CDK11A-222	ENST00000498810	CLEC4G	Q6UXB4	293 aa		13.85	□□□□□ -0.19
CDK11A-222	ENST00000498810	NBPF15	Q8N660	670 aa		13.85	□□□□□ -0.19
CDK11A-222	ENST00000498810	CCDC88A	Q3V6T2	1871 aa		13.84	□□□□□ -0.19
CDK11A-222	ENST00000498810	UTRN	P46939	3433 aa		13.84	□□□□□ -0.19
CDK11A-222	ENST00000498810	ATP10D	Q9P241	1426 aa		13.84	□□□□□ -0.19
CDK11A-222	ENST00000498810	PRR5L	Q6MZQ0	368 aa		13.84	□□□□□ -0.19
CDK11A-222	ENST00000498810	CCDC24	Q8N4L8	307 aa		13.84	□□□□□ -0.19
CDK11A-222	ENST00000498810	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.84	□□□□□ -0.19	1e-9	■■■■□ 26.3
CDK11A-222	ENST00000498810	SLC4A5	Q9BY07	1137 aa		13.84	□□□□□ -0.19
CDK11A-222	ENST00000498810	ZBTB3	Q9H5J0	574 aa		13.84	□□□□□ -0.19
CDK11A-222	ENST00000498810	ZNF526	Q8TF50	670 aa	Predicted RBP	13.83	□□□□□ -0.2
CDK11A-222	ENST00000498810	PDZRN3	Q9UPQ7	1066 aa		13.83	□□□□□ -0.2
CDK11A-222	ENST00000498810	VPS9D1	Q9Y2B5	631 aa		13.83	□□□□□ -0.2
CDK11A-222	ENST00000498810	MAP3K15	Q6ZN16	1313 aa		13.83	□□□□□ -0.2
CDK11A-222	ENST00000498810	TIAM2	Q8IVF5	1701 aa		13.82	□□□□□ -0.2
CDK11A-222	ENST00000498810	GNAI1	P63096	354 aa		13.82	□□□□□ -0.2
CDK11A-222	ENST00000498810	E2F4	Q16254	413 aa		13.82	□□□□□ -0.2
CDK11A-222	ENST00000498810	HDGFL1	Q5TGJ6	251 aa		13.82	□□□□□ -0.2
CDK11A-222	ENST00000498810	TTLL6	Q8N841	843 aa		13.82	□□□□□ -0.2
CDK11A-222	ENST00000498810	BRIP1	Q9BX63	1249 aa		13.82	□□□□□ -0.2
CDK11A-222	ENST00000498810	NYX	Q9GZU5	481 aa		13.82	□□□□□ -0.2
CDK11A-222	ENST00000498810	SBF1	O95248	1867 aa		13.82	□□□□□ -0.2
CDK11A-222	ENST00000498810	SENP3-EIF4A1	A0A087X0R7	540 aa		13.81	□□□□□ -0.2
CDK11A-222	ENST00000498810	AIMP1	Q12904	312 aa	Known RBP	13.81	□□□□□ -0.2
CDK11A-222	ENST00000498810	CCDC184	Q52MB2	194 aa		13.81	□□□□□ -0.2
CDK11A-222	ENST00000498810	TPTE2	Q6XPS3	522 aa		13.81	□□□□□ -0.2
CDK11A-222	ENST00000498810	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.81	□□□□□ -0.2
CDK11A-222	ENST00000498810	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.81	□□□□□ -0.2
CDK11A-222	ENST00000498810	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.8	□□□□□ -0.2
CDK11A-222	ENST00000498810	ERVV-1	B6SEH8	477 aa		13.8	□□□□□ -0.2
CDK11A-222	ENST00000498810	CHL1	O00533	1208 aa		13.8	□□□□□ -0.2
CDK11A-222	ENST00000498810	ANXA1	P04083	346 aa		13.8	□□□□□ -0.2
CDK11A-222	ENST00000498810	KCNA3	P22001	575 aa		13.8	□□□□□ -0.2
CDK11A-222	ENST00000498810	GPT	P24298	496 aa		13.8	□□□□□ -0.2
CDK11A-222	ENST00000498810	HLF	Q16534	295 aa		13.8	□□□□□ -0.2
CDK11A-222	ENST00000498810	KRT24	Q2M2I5	525 aa		13.8	□□□□□ -0.2
CDK11A-222	ENST00000498810	TYW1B	Q6NUM6	668 aa		13.8	□□□□□ -0.2
CDK11A-222	ENST00000498810	TTLL7	Q6ZT98	887 aa		13.8	□□□□□ -0.2
CDK11A-222	ENST00000498810	FBXW7	Q969H0	707 aa		13.8	□□□□□ -0.2
CDK11A-222	ENST00000498810	MBIP	Q9NS73	344 aa		13.8	□□□□□ -0.2
CDK11A-222	ENST00000498810	WDR70	Q9NW82	654 aa		13.8	□□□□□ -0.2
CDK11A-222	ENST00000498810	IFT57	Q9NWB7	429 aa		13.8	□□□□□ -0.2
CDK11A-222	ENST00000498810	FAM9B	Q8IZU0	186 aa		13.79	□□□□□ -0.2
CDK11A-222	ENST00000498810	ZBED2	Q9BTP6	218 aa		13.79	□□□□□ -0.2
CDK11A-222	ENST00000498810	SLX4	Q8IY92	1834 aa		13.78	□□□□□ -0.2
CDK11A-222	ENST00000498810	HOXB7	P09629	217 aa		13.78	□□□□□ -0.2
CDK11A-222	ENST00000498810	PDIA6	Q15084	440 aa		13.78	□□□□□ -0.2
CDK11A-222	ENST00000498810	DUSP27	Q5VZP5	1158 aa		13.78	□□□□□ -0.2
CDK11A-222	ENST00000498810	CNKSR1	Q969H4	720 aa		13.78	□□□□□ -0.2
CDK11A-222	ENST00000498810	RNF181	Q9P0P0	153 aa		13.78	□□□□□ -0.2
CDK11A-222	ENST00000498810	CHPF2	Q9P2E5	772 aa		13.78	□□□□□ -0.2
CDK11A-222	ENST00000498810	ADCY9	O60503	1353 aa		13.78	□□□□□ -0.2
CDK11A-222	ENST00000498810	PROSER3	Q2NL68	480 aa		13.77	□□□□□ -0.21
CDK11A-222	ENST00000498810	FER1L6	Q2WGJ9	1857 aa		13.77	□□□□□ -0.21
CDK11A-222	ENST00000498810	HSP90AB3P	Q58FF7	597 aa		13.77	□□□□□ -0.21
CDK11A-222	ENST00000498810	C9orf131	Q5VYM1	1079 aa		13.77	□□□□□ -0.21
CDK11A-222	ENST00000498810	PPP1R42	Q7Z4L9	355 aa		13.77	□□□□□ -0.21
CDK11A-222	ENST00000498810	XAGE3	Q8WTP9	111 aa		13.77	□□□□□ -0.21
CDK11A-222	ENST00000498810	MASTL	Q96GX5	879 aa		13.77	□□□□□ -0.21
CDK11A-222	ENST00000498810	CHMP4A	Q9BY43	222 aa		13.77	□□□□□ -0.21
CDK11A-222	ENST00000498810	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
CDK11A-222	ENST00000498810	TSHZ2	Q9NRE2	1034 aa		13.77	□□□□□ -0.21
CDK11A-222	ENST00000498810	DBF4	Q9UBU7	674 aa	Predicted RBP	13.77	□□□□□ -0.21
CDK11A-222	ENST00000498810	SALL2	Q9Y467	1007 aa	Predicted RBP	13.77	□□□□□ -0.21
CDK11A-222	ENST00000498810	DICER1	Q9UPY3	1922 aa	Known RBP	13.76	□□□□□ -0.21
CDK11A-222	ENST00000498810	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.76	□□□□□ -0.21
CDK11A-222	ENST00000498810	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.76	□□□□□ -0.21
CDK11A-222	ENST00000498810	ELL2	O00472	640 aa	Predicted RBP	13.76	□□□□□ -0.21
CDK11A-222	ENST00000498810	RASSF7	Q02833	373 aa		13.76	□□□□□ -0.21
CDK11A-222	ENST00000498810	STYK1	Q6J9G0	422 aa		13.76	□□□□□ -0.21
CDK11A-222	ENST00000498810	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.76	□□□□□ -0.21
CDK11A-222	ENST00000498810	COPS6	Q7L5N1	327 aa		13.76	□□□□□ -0.21

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