RNA–Protein interactions for RNA: ENST00000498443.5

TSPAN1-209, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 1,071 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-209ENST00000498443 ANKRD31Q8N7Z5 1873 aa12.74□□□□□ -0.37
TSPAN1-209ENST00000498443 PASKQ96RG2 1323 aa12.74□□□□□ -0.37
TSPAN1-209ENST00000498443 PI4KAP2A4QPH2 592 aa12.74□□□□□ -0.37
TSPAN1-209ENST00000498443 NTSR2O95665 410 aa12.74□□□□□ -0.37
TSPAN1-209ENST00000498443 HCLS1P14317 486 aaPredicted RBP12.74□□□□□ -0.37
TSPAN1-209ENST00000498443 OLFM4Q6UX06 510 aa12.74□□□□□ -0.37
TSPAN1-209ENST00000498443 RIC3Q7Z5B4 369 aa12.74□□□□□ -0.37
TSPAN1-209ENST00000498443 LDHDQ86WU2 507 aa12.74□□□□□ -0.37
TSPAN1-209ENST00000498443 MRPL50Q8N5N7 158 aaKnown RBP12.74□□□□□ -0.37
TSPAN1-209ENST00000498443 PI4KAP1Q8N8J0 262 aa12.74□□□□□ -0.37
TSPAN1-209ENST00000498443 SSH1Q8WYL5 1049 aa12.74□□□□□ -0.37
TSPAN1-209ENST00000498443 PCDH10Q9P2E7 1040 aa12.74□□□□□ -0.37
TSPAN1-209ENST00000498443 TNNQ9UQP3 1299 aa12.74□□□□□ -0.37
TSPAN1-209ENST00000498443 MAP3K2Q9Y2U5 619 aa12.74□□□□□ -0.37
TSPAN1-209ENST00000498443 NRXN2Q9P2S2 1712 aa12.74□□□□□ -0.37
TSPAN1-209ENST00000498443 IQCA1LA6NCM1 817 aa12.73□□□□□ -0.37
TSPAN1-209ENST00000498443 IGKV5-2P06315 115 aa12.73□□□□□ -0.37
TSPAN1-209ENST00000498443 CWF19L2Q2TBE0 894 aaKnown RBP12.73□□□□□ -0.37
TSPAN1-209ENST00000498443 DEFB115Q30KQ5 88 aa12.73□□□□□ -0.37
TSPAN1-209ENST00000498443 CNBD1Q8NA66 436 aa12.73□□□□□ -0.37
TSPAN1-209ENST00000498443 ISCA1Q9BUE6 129 aa12.73□□□□□ -0.37
TSPAN1-209ENST00000498443 TSKSQ9UJT2 592 aa12.73□□□□□ -0.37
TSPAN1-209ENST00000498443 FLIIQ13045 1269 aa12.72□□□□□ -0.37
TSPAN1-209ENST00000498443 C20orf194Q5TEA3 1177 aa12.72□□□□□ -0.37
TSPAN1-209ENST00000498443 FAM89AQ96GI7 184 aa12.72□□□□□ -0.37
TSPAN1-209ENST00000498443 TAF1DQ9H5J8 278 aaPredicted RBP12.72□□□□□ -0.37
TSPAN1-209ENST00000498443 ZNF652Q9Y2D9 606 aa12.72□□□□□ -0.37
TSPAN1-209ENST00000498443 FER1L6Q2WGJ9 1857 aa12.72□□□□□ -0.37
TSPAN1-209ENST00000498443 COL11A2P13942 1736 aaPredicted RBP12.71□□□□□ -0.37
TSPAN1-209ENST00000498443 WDR33Q9C0J8 1336 aaKnown RBP12.71□□□□□ -0.37
TSPAN1-209ENST00000498443 MAP1SQ66K74 1059 aaPredicted RBP12.71□□□□□ -0.37
TSPAN1-209ENST00000498443 BEGAINQ9BUH8 593 aa12.71□□□□□ -0.37
TSPAN1-209ENST00000498443 STK31Q9BXU1 1019 aa12.71□□□□□ -0.37
TSPAN1-209ENST00000498443 BCAR3O75815 825 aa12.7□□□□□ -0.38
TSPAN1-209ENST00000498443 PDE6BP35913 854 aa12.7□□□□□ -0.38
TSPAN1-209ENST00000498443 RARSP54136 660 aaKnown RBP12.7□□□□□ -0.38
TSPAN1-209ENST00000498443 MAP2K1Q02750 393 aaPredicted RBP12.7□□□□□ -0.38
TSPAN1-209ENST00000498443 FKBP5Q13451 457 aaPredicted RBP12.7□□□□□ -0.38
TSPAN1-209ENST00000498443 KSR2Q6VAB6 950 aa12.7□□□□□ -0.38
TSPAN1-209ENST00000498443 TPTE2Q6XPS3 522 aa12.7□□□□□ -0.38
TSPAN1-209ENST00000498443 CLUAP1Q96AJ1 413 aa12.7□□□□□ -0.38
TSPAN1-209ENST00000498443 METTL22Q9BUU2 404 aaPredicted RBP12.7□□□□□ -0.38
TSPAN1-209ENST00000498443 UTP14AQ9BVJ6 771 aaKnown RBP12.7□□□□□ -0.38
TSPAN1-209ENST00000498443 BRIP1Q9BX63 1249 aa12.7□□□□□ -0.38
TSPAN1-209ENST00000498443 COL4A1P02462 1669 aa12.7□□□□□ -0.38
TSPAN1-209ENST00000498443 ARFGEF2Q9Y6D5 1785 aa12.69□□□□□ -0.38
TSPAN1-209ENST00000498443 ITGBL1O95965 494 aaPredicted RBP12.69□□□□□ -0.38
TSPAN1-209ENST00000498443 GTF2E1P29083 439 aaPredicted RBP12.69□□□□□ -0.38
TSPAN1-209ENST00000498443 CCDC85AQ96PX6 553 aaPredicted RBP12.69□□□□□ -0.38
TSPAN1-209ENST00000498443 CHMP4BQ9H444 224 aaKnown RBP12.69□□□□□ -0.38
TSPAN1-209ENST00000498443 DAXXQ9UER7 740 aaPredicted RBP12.69□□□□□ -0.38
TSPAN1-209ENST00000498443 TRMT112Q9UI30 125 aaKnown RBP12.69□□□□□ -0.38
TSPAN1-209ENST00000498443 HACL1Q9UJ83 578 aa12.69□□□□□ -0.38
TSPAN1-209ENST00000498443 ZNF541Q9H0D2 1346 aa12.68□□□□□ -0.38
TSPAN1-209ENST00000498443 SCN4AP35499 1836 aa12.68□□□□□ -0.38
TSPAN1-209ENST00000498443 SRGNP10124 158 aa12.68□□□□□ -0.38
TSPAN1-209ENST00000498443 EPHX2P34913 555 aa12.68□□□□□ -0.38
TSPAN1-209ENST00000498443 ST5P78524 1137 aa12.68□□□□□ -0.38
TSPAN1-209ENST00000498443 PRPF40BQ6NWY9 871 aaKnown RBP12.68□□□□□ -0.38
TSPAN1-209ENST00000498443 CNTROBQ8N137 903 aa12.68□□□□□ -0.38
TSPAN1-209ENST00000498443 SLX4Q8IY92 1834 aa12.67□□□□□ -0.38
TSPAN1-209ENST00000498443 RASSF10A6NK89 507 aa12.67□□□□□ -0.38
TSPAN1-209ENST00000498443 ZKSCAN2Q63HK3 967 aa12.67□□□□□ -0.38
TSPAN1-209ENST00000498443 RWDD1Q9H446 243 aaPredicted RBP12.67□□□□□ -0.38
TSPAN1-209ENST00000498443 ZNF277Q9NRM2 450 aaPredicted RBP12.67□□□□□ -0.38
TSPAN1-209ENST00000498443 NOB1Q9ULX3 412 aaKnown RBP12.67□□□□□ -0.38
TSPAN1-209ENST00000498443 TAF1P21675 1872 aa12.67□□□□□ -0.38
TSPAN1-209ENST00000498443 NEURL1BA8MQ27 555 aa12.66□□□□□ -0.38
TSPAN1-209ENST00000498443 IPO8O15397 1037 aaKnown RBP12.66□□□□□ -0.38
TSPAN1-209ENST00000498443 FMR1Q06787 632 aaKnown RBP eCLIP12.66□□□□□ -0.38
TSPAN1-209ENST00000498443 PARP10Q53GL7 1025 aa12.66□□□□□ -0.38
TSPAN1-209ENST00000498443 BEND3Q5T5X7 828 aa12.66□□□□□ -0.38
TSPAN1-209ENST00000498443 CYP4F22Q6NT55 531 aa12.66□□□□□ -0.38
TSPAN1-209ENST00000498443 SLC4A10Q6U841 1118 aa12.66□□□□□ -0.38
TSPAN1-209ENST00000498443 PPP1R42Q7Z4L9 355 aa12.66□□□□□ -0.38
TSPAN1-209ENST00000498443 DNAAF4Q8WXU2 420 aa12.66□□□□□ -0.38
TSPAN1-209ENST00000498443 CNKSR1Q969H4 720 aa12.66□□□□□ -0.38
TSPAN1-209ENST00000498443 SMC4Q9NTJ3 1288 aa12.66□□□□□ -0.38
TSPAN1-209ENST00000498443 ANKRD36CQ5JPF3 1778 aa12.66□□□□□ -0.38
TSPAN1-209ENST00000498443 LTBP3Q9NS15 1303 aa12.65□□□□□ -0.38
TSPAN1-209ENST00000498443 KLRG2A4D1S0 409 aaPredicted RBP12.65□□□□□ -0.38
TSPAN1-209ENST00000498443 RGL2O15211 777 aa12.65□□□□□ -0.38
TSPAN1-209ENST00000498443 HSP90AB3PQ58FF7 597 aa12.65□□□□□ -0.38
TSPAN1-209ENST00000498443 SLC10A5Q5PT55 438 aa12.65□□□□□ -0.38
TSPAN1-209ENST00000498443 L3MBTL3Q96JM7 780 aaPredicted RBP12.65□□□□□ -0.38
TSPAN1-209ENST00000498443 CAPNS2Q96L46 248 aa12.65□□□□□ -0.38
TSPAN1-209ENST00000498443 SEC31BQ9NQW1 1179 aa12.65□□□□□ -0.38
TSPAN1-209ENST00000498443 IRS4O14654 1257 aaPredicted RBP12.64□□□□□ -0.39
TSPAN1-209ENST00000498443 DDX58O95786 925 aaKnown RBP12.64□□□□□ -0.39
TSPAN1-209ENST00000498443 TRIM28Q13263 835 aaKnown RBP12.64□□□□□ -0.39
TSPAN1-209ENST00000498443 EPHA10Q5JZY3 1008 aa12.64□□□□□ -0.39
TSPAN1-209ENST00000498443 SOGA3Q5TF21 947 aa12.64□□□□□ -0.39
TSPAN1-209ENST00000498443 FRAT1Q92837 279 aaPredicted RBP12.64□□□□□ -0.39
TSPAN1-209ENST00000498443 GPR101Q96P66 508 aaPredicted RBP12.64□□□□□ -0.39
TSPAN1-209ENST00000498443 MCOLN1Q9GZU1 580 aa12.64□□□□□ -0.39
TSPAN1-209ENST00000498443 NYXQ9GZU5 481 aa12.64□□□□□ -0.39
TSPAN1-209ENST00000498443 CWC25Q9NXE8 425 aaPredicted RBP12.64□□□□□ -0.39
TSPAN1-209ENST00000498443 PDZRN3Q9UPQ7 1066 aa12.64□□□□□ -0.39
TSPAN1-209ENST00000498443 GJA3Q9Y6H8 435 aa12.64□□□□□ -0.39
TSPAN1-209ENST00000498443 SH3TC1Q8TE82 1336 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms