RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 C2CD5Q86YS7 1000 aa14.34□□□□□ -0.11
CTTN-208ENST00000498223 CCDC85AQ96PX6 553 aaPredicted RBP14.34□□□□□ -0.11
CTTN-208ENST00000498223 LRRFIP2Q9Y608 721 aaKnown RBP14.34□□□□□ -0.11
CTTN-208ENST00000498223 COL11A2P13942 1736 aaPredicted RBP14.34□□□□□ -0.11
CTTN-208ENST00000498223 UTYO14607 1347 aa14.34□□□□□ -0.11
CTTN-208ENST00000498223 DLEC1Q9Y238 1755 aa14.34□□□□□ -0.11
CTTN-208ENST00000498223 C10orf71Q711Q0 1435 aa14.33□□□□□ -0.11
CTTN-208ENST00000498223 ZBTB7BO15156 539 aaPredicted RBP14.33□□□□□ -0.12
CTTN-208ENST00000498223 CASP7P55210 303 aa14.33□□□□□ -0.12
CTTN-208ENST00000498223 CTSWP56202 376 aa14.33□□□□□ -0.12
CTTN-208ENST00000498223 CCDC152Q4G0S7 254 aa14.33□□□□□ -0.12
CTTN-208ENST00000498223 ZNF622Q969S3 477 aaKnown RBP eCLIP14.33□□□□□ -0.124e-8■■□□□ 12.3
CTTN-208ENST00000498223 BICC1Q9H694 974 aaKnown RBP14.33□□□□□ -0.12
CTTN-208ENST00000498223 RIC1Q4ADV7 1423 aa14.32□□□□□ -0.12
CTTN-208ENST00000498223 LMBR1LQ6UX01 489 aa14.32□□□□□ -0.12
CTTN-208ENST00000498223 RBM17Q96I25 401 aaKnown RBP14.32□□□□□ -0.12
CTTN-208ENST00000498223 C1orf115Q9H7X2 142 aa14.32□□□□□ -0.12
CTTN-208ENST00000498223 WWC3Q9ULE0 1092 aa14.32□□□□□ -0.12
CTTN-208ENST00000498223 PDZRN3Q9UPQ7 1066 aa14.32□□□□□ -0.12
CTTN-208ENST00000498223 A0A0G2JLW4 131 aa14.31□□□□□ -0.12
CTTN-208ENST00000498223 CHRNA5P30532 468 aa14.31□□□□□ -0.12
CTTN-208ENST00000498223 FOXO4P98177 505 aa14.31□□□□□ -0.12
CTTN-208ENST00000498223 C3orf67Q6ZVT6 689 aa14.31□□□□□ -0.12
CTTN-208ENST00000498223 DDX46Q7L014 1031 aaKnown RBP14.31□□□□□ -0.12
CTTN-208ENST00000498223 EXOC6Q8TAG9 804 aa14.31□□□□□ -0.12
CTTN-208ENST00000498223 PLA2G12BQ9BX93 195 aa14.31□□□□□ -0.12
CTTN-208ENST00000498223 KIAA1551Q9HCM1 1747 aa14.31□□□□□ -0.12
CTTN-208ENST00000498223 BRCA1P38398 1863 aaKnown RBP14.3□□□□□ -0.12
CTTN-208ENST00000498223 DPEP1P16444 411 aa14.3□□□□□ -0.12
CTTN-208ENST00000498223 TAF7LQ5H9L4 462 aa14.3□□□□□ -0.12
CTTN-208ENST00000498223 EPHA10Q5JZY3 1008 aa14.3□□□□□ -0.12
CTTN-208ENST00000498223 TTLL11Q8NHH1 800 aa14.3□□□□□ -0.12
CTTN-208ENST00000498223 MASTLQ96GX5 879 aa14.3□□□□□ -0.12
CTTN-208ENST00000498223 SLX4Q8IY92 1834 aa14.29□□□□□ -0.12
CTTN-208ENST00000498223 NPR1P16066 1061 aa14.29□□□□□ -0.12
CTTN-208ENST00000498223 IFIT5Q13325 482 aaKnown RBP14.29□□□□□ -0.12
CTTN-208ENST00000498223 SF3B3Q15393 1217 aaKnown RBP14.29□□□□□ -0.12
CTTN-208ENST00000498223 CCDC57Q2TAC2 916 aa14.29□□□□□ -0.12
CTTN-208ENST00000498223 ZBTB40Q9NUA8 1239 aa14.29□□□□□ -0.12
CTTN-208ENST00000498223 ANKRD18BA2A2Z9 1011 aa14.28□□□□□ -0.12
CTTN-208ENST00000498223 SRGNP10124 158 aa14.28□□□□□ -0.12
CTTN-208ENST00000498223 ITGA6P23229 1130 aa14.28□□□□□ -0.12
CTTN-208ENST00000498223 ALDH1B1P30837 517 aa14.28□□□□□ -0.12
CTTN-208ENST00000498223 FAM161AQ3B820 660 aa14.28□□□□□ -0.12
CTTN-208ENST00000498223 KAZALD1Q96I82 304 aa14.28□□□□□ -0.12
CTTN-208ENST00000498223 CDC5LQ99459 802 aaKnown RBP14.28□□□□□ -0.12
CTTN-208ENST00000498223 GREM2Q9H772 168 aa14.28□□□□□ -0.12
CTTN-208ENST00000498223 KLRG2A4D1S0 409 aaPredicted RBP14.27□□□□□ -0.13
CTTN-208ENST00000498223 SRGAP3O43295 1099 aa14.27□□□□□ -0.13
CTTN-208ENST00000498223 CSF1RP07333 972 aa14.27□□□□□ -0.13
CTTN-208ENST00000498223 CRY2Q49AN0 593 aa14.27□□□□□ -0.13
CTTN-208ENST00000498223 STYK1Q6J9G0 422 aa14.27□□□□□ -0.13
CTTN-208ENST00000498223 ANKRD18AQ8IVF6 992 aa14.27□□□□□ -0.13
CTTN-208ENST00000498223 ANKRD44Q8N8A2 993 aa14.27□□□□□ -0.13
CTTN-208ENST00000498223 CNKSR1Q969H4 720 aa14.27□□□□□ -0.13
CTTN-208ENST00000498223 GPBP1L1Q9HC44 474 aaPredicted RBP14.27□□□□□ -0.13
CTTN-208ENST00000498223 SEC31BQ9NQW1 1179 aa14.27□□□□□ -0.13
CTTN-208ENST00000498223 PIM2Q9P1W9 311 aa14.27□□□□□ -0.13
CTTN-208ENST00000498223 ZNF219Q9P2Y4 722 aaPredicted RBP14.27□□□□□ -0.13
CTTN-208ENST00000498223 BCS1LQ9Y276 419 aa14.27□□□□□ -0.13
CTTN-208ENST00000498223 IGHMBP2P38935 993 aaKnown RBP14.26□□□□□ -0.13
CTTN-208ENST00000498223 RABL6Q3YEC7 729 aaPredicted RBP14.26□□□□□ -0.13
CTTN-208ENST00000498223 TTLL6Q8N841 843 aa14.26□□□□□ -0.13
CTTN-208ENST00000498223 CRAMP1Q96RY5 1269 aa14.26□□□□□ -0.13
CTTN-208ENST00000498223 TMX4Q9H1E5 349 aaPredicted RBP14.26□□□□□ -0.13
CTTN-208ENST00000498223 ARFGEF1Q9Y6D6 1849 aa14.26□□□□□ -0.13
CTTN-208ENST00000498223 HMMRO75330 724 aa14.25□□□□□ -0.13
CTTN-208ENST00000498223 HOXA10P31260 410 aaPredicted RBP14.25□□□□□ -0.13
CTTN-208ENST00000498223 ATP8B2P98198 1209 aa14.25□□□□□ -0.13
CTTN-208ENST00000498223 GRAPQ13588 217 aa14.25□□□□□ -0.13
CTTN-208ENST00000498223 AAMPQ13685 434 aa14.25□□□□□ -0.13
CTTN-208ENST00000498223 GRAPLQ8TC17 118 aaPredicted RBP14.25□□□□□ -0.13
CTTN-208ENST00000498223 MPHOSPH8Q99549 860 aa14.25□□□□□ -0.13
CTTN-208ENST00000498223 CCDC88AQ3V6T2 1871 aa14.25□□□□□ -0.13
CTTN-208ENST00000498223 PPEF1O14829 653 aaPredicted RBP14.24□□□□□ -0.13
CTTN-208ENST00000498223 KCNA3P22001 575 aa14.24□□□□□ -0.13
CTTN-208ENST00000498223 RPS8P62241 208 aaKnown RBP14.24□□□□□ -0.13
CTTN-208ENST00000498223 DALRD3Q5D0E6 543 aaKnown RBP14.24□□□□□ -0.13
CTTN-208ENST00000498223 CEP85Q6P2H3 762 aa14.24□□□□□ -0.13
CTTN-208ENST00000498223 RPAP2Q8IXW5 612 aaPredicted RBP14.24□□□□□ -0.13
CTTN-208ENST00000498223 CELF1Q92879 486 aaKnown RBP14.24□□□□□ -0.13
CTTN-208ENST00000498223 ZNF594Q96JF6 807 aaPredicted RBP14.24□□□□□ -0.13
CTTN-208ENST00000498223 CNNM1Q9NRU3 951 aa14.24□□□□□ -0.13
CTTN-208ENST00000498223 RTL9Q8NET4 1388 aa14.23□□□□□ -0.13
CTTN-208ENST00000498223 PNMA6EA0A0J9YXQ4 647 aa14.23□□□□□ -0.13
CTTN-208ENST00000498223 BBOX1O75936 387 aa14.23□□□□□ -0.13
CTTN-208ENST00000498223 PRPF40BQ6NWY9 871 aaKnown RBP14.23□□□□□ -0.13
CTTN-208ENST00000498223 ZNF526Q8TF50 670 aaPredicted RBP14.23□□□□□ -0.13
CTTN-208ENST00000498223 SIL1Q9H173 461 aa14.23□□□□□ -0.13
CTTN-208ENST00000498223 OS9Q13438 667 aaPredicted RBP14.22□□□□□ -0.13
CTTN-208ENST00000498223 MTX1Q13505 466 aa14.22□□□□□ -0.13
CTTN-208ENST00000498223 LDHAL6AQ6ZMR3 332 aa14.22□□□□□ -0.13
CTTN-208ENST00000498223 ARHGAP27Q6ZUM4 889 aa14.22□□□□□ -0.13
CTTN-208ENST00000498223 KLHDC4Q8TBB5 520 aa14.22□□□□□ -0.13
CTTN-208ENST00000498223 A0A1B0GUL6 1792 aa14.22□□□□□ -0.13
CTTN-208ENST00000498223 COL4A1P02462 1669 aa14.21□□□□□ -0.13
CTTN-208ENST00000498223 G3BP1Q13283 466 aaKnown RBP eCLIP14.21□□□□□ -0.13
CTTN-208ENST00000498223 TMC4Q7Z404 712 aa14.21□□□□□ -0.13
CTTN-208ENST00000498223 PA2G4Q9UQ80 394 aaKnown RBP14.21□□□□□ -0.13
CTTN-208ENST00000498223 PCDHB15Q9Y5E8 787 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms