RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 DZIP1LQ8IYY4 767 aaKnown RBP20.14■□□□□ 0.81
SSBP1-214ENST00000498107 YBX3P16989 372 aaKnown RBP eCLIP20.13■□□□□ 0.81
SSBP1-214ENST00000498107 CTSWP56202 376 aa20.13■□□□□ 0.81
SSBP1-214ENST00000498107 PRPF40BQ6NWY9 871 aaKnown RBP20.13■□□□□ 0.81
SSBP1-214ENST00000498107 CLUAP1Q96AJ1 413 aa20.13■□□□□ 0.81
SSBP1-214ENST00000498107 TMX4Q9H1E5 349 aaPredicted RBP20.13■□□□□ 0.81
SSBP1-214ENST00000498107 BBOX1O75936 387 aa20.12■□□□□ 0.81
SSBP1-214ENST00000498107 TMC4Q7Z404 712 aa20.12■□□□□ 0.81
SSBP1-214ENST00000498107 USP44Q9H0E7 712 aa20.12■□□□□ 0.81
SSBP1-214ENST00000498107 GRAPQ13588 217 aa20.11■□□□□ 0.81
SSBP1-214ENST00000498107 CC2D2BQ6DHV5 1058 aa20.11■□□□□ 0.81
SSBP1-214ENST00000498107 TTLL11Q8NHH1 800 aa20.11■□□□□ 0.81
SSBP1-214ENST00000498107 GRAPLQ8TC17 118 aaPredicted RBP20.11■□□□□ 0.81
SSBP1-214ENST00000498107 CACNA1SQ13698 1873 aa20.1■□□□□ 0.81
SSBP1-214ENST00000498107 GNAI3P08754 354 aa20.1■□□□□ 0.81
SSBP1-214ENST00000498107 NBPF7P0C2Y1 421 aaPredicted RBP20.1■□□□□ 0.81
SSBP1-214ENST00000498107 UBTFL1P0CB47 393 aaPredicted RBP20.1■□□□□ 0.81
SSBP1-214ENST00000498107 GRIPAP1Q4V328 841 aa20.1■□□□□ 0.81
SSBP1-214ENST00000498107 SLX4Q8IY92 1834 aa20.1■□□□□ 0.81
SSBP1-214ENST00000498107 RTL9Q8NET4 1388 aa20.09■□□□□ 0.81
SSBP1-214ENST00000498107 C21orf2O43822 256 aa20.09■□□□□ 0.81
SSBP1-214ENST00000498107 CSF1RP07333 972 aa20.09■□□□□ 0.81
SSBP1-214ENST00000498107 CDC5LQ99459 802 aaKnown RBP20.09■□□□□ 0.81
SSBP1-214ENST00000498107 PPEF1O14829 653 aaPredicted RBP20.08■□□□□ 0.81
SSBP1-214ENST00000498107 ARHGAP27Q6ZUM4 889 aa20.08■□□□□ 0.81
SSBP1-214ENST00000498107 TMEM57Q8N5G2 664 aa20.08■□□□□ 0.81
SSBP1-214ENST00000498107 RPS8P62241 208 aaKnown RBP20.07■□□□□ 0.8
SSBP1-214ENST00000498107 FOXO4P98177 505 aa20.07■□□□□ 0.8
SSBP1-214ENST00000498107 CCDC93Q567U6 631 aa20.07■□□□□ 0.8
SSBP1-214ENST00000498107 C7orf43Q8WVR3 580 aa20.07■□□□□ 0.8
SSBP1-214ENST00000498107 SUCLG2Q96I99 432 aa20.07■□□□□ 0.8
SSBP1-214ENST00000498107 CCDC85AQ96PX6 553 aaPredicted RBP20.07■□□□□ 0.8
SSBP1-214ENST00000498107 ZNF219Q9P2Y4 722 aaPredicted RBP20.07■□□□□ 0.8
SSBP1-214ENST00000498107 TNNQ9UQP3 1299 aa20.07■□□□□ 0.8
SSBP1-214ENST00000498107 PDE3AQ14432 1141 aa20.06■□□□□ 0.8
SSBP1-214ENST00000498107 LMBR1LQ6UX01 489 aa20.06■□□□□ 0.8
SSBP1-214ENST00000498107 ANKRD18AQ8IVF6 992 aa20.06■□□□□ 0.8
SSBP1-214ENST00000498107 ITPRIPQ8IWB1 547 aa20.06■□□□□ 0.8
SSBP1-214ENST00000498107 RTKN2Q8IZC4 609 aa20.06■□□□□ 0.8
SSBP1-214ENST00000498107 CHMP4BQ9H444 224 aaKnown RBP20.06■□□□□ 0.8
SSBP1-214ENST00000498107 GREM2Q9H772 168 aa20.06■□□□□ 0.8
SSBP1-214ENST00000498107 CHMP3Q9Y3E7 222 aa20.06■□□□□ 0.8
SSBP1-214ENST00000498107 ATP6V0A2Q9Y487 856 aa20.06■□□□□ 0.8
SSBP1-214ENST00000498107 ANKRD18BA2A2Z9 1011 aa20.05■□□□□ 0.8
SSBP1-214ENST00000498107 IFIT5Q13325 482 aaKnown RBP20.05■□□□□ 0.8
SSBP1-214ENST00000498107 SP8Q8IXZ3 490 aa20.05■□□□□ 0.8
SSBP1-214ENST00000498107 CELF1Q92879 486 aaKnown RBP20.05■□□□□ 0.8
SSBP1-214ENST00000498107 SEC31BQ9NQW1 1179 aa20.05■□□□□ 0.8
SSBP1-214ENST00000498107 PLIN1O60240 522 aa20.04■□□□□ 0.8
SSBP1-214ENST00000498107 ITGA6P23229 1130 aa20.04■□□□□ 0.8
SSBP1-214ENST00000498107 IGHMBP2P38935 993 aaKnown RBP20.04■□□□□ 0.8
SSBP1-214ENST00000498107 CCDC57Q2TAC2 916 aa20.04■□□□□ 0.8
SSBP1-214ENST00000498107 RABL6Q3YEC7 729 aaPredicted RBP20.04■□□□□ 0.8
SSBP1-214ENST00000498107 MEIS3Q99687 375 aa20.04■□□□□ 0.8
SSBP1-214ENST00000498107 RLBP1P12271 317 aa20.03■□□□□ 0.8
SSBP1-214ENST00000498107 FAM161AQ3B820 660 aa20.03■□□□□ 0.8
SSBP1-214ENST00000498107 EPHA10Q5JZY3 1008 aa20.03■□□□□ 0.8
SSBP1-214ENST00000498107 PANK1Q8TE04 598 aa20.03■□□□□ 0.8
SSBP1-214ENST00000498107 KAZALD1Q96I82 304 aa20.03■□□□□ 0.8
SSBP1-214ENST00000498107 BICC1Q9H694 974 aaKnown RBP20.03■□□□□ 0.8
SSBP1-214ENST00000498107 GNAI2P04899 355 aa20.02■□□□□ 0.8
SSBP1-214ENST00000498107 YY1P25490 414 aa20.02■□□□□ 0.8
SSBP1-214ENST00000498107 TAOK3Q9H2K8 898 aa20.02■□□□□ 0.8
SSBP1-214ENST00000498107 DDX19BQ9UMR2 479 aa20.02■□□□□ 0.8
SSBP1-214ENST00000498107 TAF1P21675 1872 aa20.02■□□□□ 0.8
SSBP1-214ENST00000498107 LTBP3Q9NS15 1303 aa20.02■□□□□ 0.79
SSBP1-214ENST00000498107 MVPQ14764 893 aaKnown RBP20.01■□□□□ 0.79
SSBP1-214ENST00000498107 TAF7LQ5H9L4 462 aa20.01■□□□□ 0.79
SSBP1-214ENST00000498107 MPHOSPH8Q99549 860 aa20.01■□□□□ 0.79
SSBP1-214ENST00000498107 BSDC1Q9NW68 430 aaPredicted RBP20.01■□□□□ 0.79
SSBP1-214ENST00000498107 LRRFIP2Q9Y608 721 aaKnown RBP20.01■□□□□ 0.79
SSBP1-214ENST00000498107 FER1L6Q2WGJ9 1857 aa20.01■□□□□ 0.79
SSBP1-214ENST00000498107 CHD4Q14839 1912 aa20■□□□□ 0.79
SSBP1-214ENST00000498107 RRP1P56182 461 aaKnown RBP20■□□□□ 0.79
SSBP1-214ENST00000498107 ANKRD44Q8N8A2 993 aa20■□□□□ 0.79
SSBP1-214ENST00000498107 PSMD1Q99460 953 aa20■□□□□ 0.79
SSBP1-214ENST00000498107 ZBTB7BO15156 539 aaPredicted RBP19.99■□□□□ 0.79
SSBP1-214ENST00000498107 FKBP4Q02790 459 aaKnown RBP eCLIP19.99■□□□□ 0.79
SSBP1-214ENST00000498107 MPNDQ8N594 471 aa19.99■□□□□ 0.79
SSBP1-214ENST00000498107 SUPT20HQ8NEM7 779 aa19.99■□□□□ 0.79
SSBP1-214ENST00000498107 GOLGB1Q14789 3259 aaKnown RBP19.99■□□□□ 0.79
SSBP1-214ENST00000498107 NFKBIEO00221 500 aa19.98■□□□□ 0.79
SSBP1-214ENST00000498107 LMNB1P20700 586 aa19.98■□□□□ 0.79
SSBP1-214ENST00000498107 DPP8Q6V1X1 898 aaPredicted RBP19.98■□□□□ 0.79
SSBP1-214ENST00000498107 COG6Q9Y2V7 657 aa19.98■□□□□ 0.79
SSBP1-214ENST00000498107 LRRC37AA6NMS7 1700 aa19.98■□□□□ 0.79
SSBP1-214ENST00000498107 OLFM4Q6UX06 510 aa19.97■□□□□ 0.79
SSBP1-214ENST00000498107 ANKRD2Q9GZV1 360 aa19.96■□□□□ 0.79
SSBP1-214ENST00000498107 VPS33BQ9H267 617 aa19.96■□□□□ 0.79
SSBP1-214ENST00000498107 ANKIB1Q9P2G1 1089 aa19.96■□□□□ 0.79
SSBP1-214ENST00000498107 NSFL1CQ9UNZ2 370 aaKnown RBP19.96■□□□□ 0.79
SSBP1-214ENST00000498107 SNED1Q8TER0 1413 aa19.95■□□□□ 0.78
SSBP1-214ENST00000498107 RASSF7Q02833 373 aa19.95■□□□□ 0.78
SSBP1-214ENST00000498107 MTX1Q13505 466 aa19.95■□□□□ 0.78
SSBP1-214ENST00000498107 LDHAL6AQ6ZMR3 332 aa19.95■□□□□ 0.78
SSBP1-214ENST00000498107 RTFDC1Q9BY42 306 aaPredicted RBP19.95■□□□□ 0.78
SSBP1-214ENST00000498107 CNNM1Q9NRU3 951 aa19.95■□□□□ 0.78
SSBP1-214ENST00000498107 PODXL2Q9NZ53 605 aa19.95■□□□□ 0.78
SSBP1-214ENST00000498107 XDHP47989 1333 aa19.95■□□□□ 0.78
SSBP1-214ENST00000498107 C20orf194Q5TEA3 1177 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms