RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 PCBP4P57723 403 aaKnown RBP5.39□□□□□ -1.55
RIF1-212ENST00000498041 NOM1Q5C9Z4 860 aaKnown RBP5.39□□□□□ -1.55
RIF1-212ENST00000498041 ZNF468Q5VIY5 522 aaPredicted RBP5.39□□□□□ -1.55
RIF1-212ENST00000498041 RGL4Q8IZJ4 473 aa5.39□□□□□ -1.55
RIF1-212ENST00000498041 EFCC1Q9HA90 598 aa5.39□□□□□ -1.55
RIF1-212ENST00000498041 EGFL7Q9UHF1 273 aa5.39□□□□□ -1.55
RIF1-212ENST00000498041 RTCBQ9Y3I0 505 aaKnown RBP5.39□□□□□ -1.55
RIF1-212ENST00000498041 FAM13AO94988 1023 aa5.38□□□□□ -1.55
RIF1-212ENST00000498041 PDIA4P13667 645 aaKnown RBP5.38□□□□□ -1.55
RIF1-212ENST00000498041 NPR3P17342 541 aa5.38□□□□□ -1.55
RIF1-212ENST00000498041 MPSTP25325 297 aa5.38□□□□□ -1.55
RIF1-212ENST00000498041 ADH6P28332 368 aa5.38□□□□□ -1.55
RIF1-212ENST00000498041 GRNP28799 593 aaKnown RBP5.38□□□□□ -1.55
RIF1-212ENST00000498041 GATA4P43694 442 aa5.38□□□□□ -1.55
RIF1-212ENST00000498041 SERPINB4P48594 390 aa5.38□□□□□ -1.55
RIF1-212ENST00000498041 DGKGP49619 791 aa5.38□□□□□ -1.55
RIF1-212ENST00000498041 ZNF211Q13398 564 aaPredicted RBP5.38□□□□□ -1.55
RIF1-212ENST00000498041 MTMR3Q13615 1198 aa5.38□□□□□ -1.55
RIF1-212ENST00000498041 CCINQ13939 588 aa5.38□□□□□ -1.55
RIF1-212ENST00000498041 ALKBH2Q6NS38 261 aa5.38□□□□□ -1.55
RIF1-212ENST00000498041 CMTR1Q8N1G2 835 aaKnown RBP5.38□□□□□ -1.55
RIF1-212ENST00000498041 PIK3R5Q8WYR1 880 aa5.38□□□□□ -1.55
RIF1-212ENST00000498041 PLVAPQ9BX97 442 aa5.38□□□□□ -1.55
RIF1-212ENST00000498041 GSX2Q9BZM3 304 aa5.38□□□□□ -1.55
RIF1-212ENST00000498041 ICMTO60725 284 aa5.37□□□□□ -1.55
RIF1-212ENST00000498041 SIN3BO75182 1162 aa5.37□□□□□ -1.55
RIF1-212ENST00000498041 EGFRP00533 1210 aa5.37□□□□□ -1.55
RIF1-212ENST00000498041 EIF1AXP47813 144 aaKnown RBP5.37□□□□□ -1.55
RIF1-212ENST00000498041 KCNA1Q09470 495 aa5.37□□□□□ -1.55
RIF1-212ENST00000498041 SYT9Q86SS6 491 aa5.37□□□□□ -1.55
RIF1-212ENST00000498041 BHMTQ93088 406 aa5.37□□□□□ -1.55
RIF1-212ENST00000498041 PNMA5Q96PV4 448 aa5.37□□□□□ -1.55
RIF1-212ENST00000498041 ANO2Q9NQ90 1003 aa5.37□□□□□ -1.55
RIF1-212ENST00000498041 KLF15Q9UIH9 416 aa5.37□□□□□ -1.55
RIF1-212ENST00000498041 GNEQ9Y223 722 aaKnown RBP5.37□□□□□ -1.55
RIF1-212ENST00000498041 USP20Q9Y2K6 914 aa5.37□□□□□ -1.55
RIF1-212ENST00000498041 PATL2C9JE40 543 aaKnown RBP5.36□□□□□ -1.55
RIF1-212ENST00000498041 XYLBO75191 536 aa5.36□□□□□ -1.55
RIF1-212ENST00000498041 ITGB7P26010 798 aa5.36□□□□□ -1.55
RIF1-212ENST00000498041 AAMPQ13685 434 aa5.36□□□□□ -1.55
RIF1-212ENST00000498041 RAB44Q7Z6P3 723 aaPredicted RBP5.36□□□□□ -1.55
RIF1-212ENST00000498041 ATCAYQ86WG3 371 aa5.36□□□□□ -1.55
RIF1-212ENST00000498041 FCHSD1Q86WN1 690 aa5.36□□□□□ -1.55
RIF1-212ENST00000498041 GLYCTKQ8IVS8 523 aa5.36□□□□□ -1.55
RIF1-212ENST00000498041 GPR152Q8TDT2 470 aa5.36□□□□□ -1.55
RIF1-212ENST00000498041 FNDC3AQ9Y2H6 1198 aaKnown RBP5.36□□□□□ -1.55
RIF1-212ENST00000498041 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.36□□□□□ -1.55
RIF1-212ENST00000498041 KCNMB2Q9Y691 235 aa5.36□□□□□ -1.55
RIF1-212ENST00000498041 FAM229AH3BQW9 127 aa5.35□□□□□ -1.55
RIF1-212ENST00000498041 H3BRB1 525 aa5.35□□□□□ -1.55
RIF1-212ENST00000498041 RPLP1P05386 114 aaKnown RBP5.35□□□□□ -1.55
RIF1-212ENST00000498041 PCSK2P16519 638 aa5.35□□□□□ -1.55
RIF1-212ENST00000498041 NFKB1P19838 968 aa5.35□□□□□ -1.55
RIF1-212ENST00000498041 EDEM1Q92611 657 aa5.35□□□□□ -1.55
RIF1-212ENST00000498041 TNFRSF25Q93038 417 aa5.35□□□□□ -1.55
RIF1-212ENST00000498041 TRIM11Q96F44 468 aa5.35□□□□□ -1.55
RIF1-212ENST00000498041 TUT1Q9H6E5 874 aaKnown RBP5.35□□□□□ -1.55
RIF1-212ENST00000498041 ADARB2-AS1A8MUL3 147 aa5.34□□□□□ -1.55
RIF1-212ENST00000498041 UBAP1LF5GYI3 381 aa5.34□□□□□ -1.55
RIF1-212ENST00000498041 SASH3O75995 380 aa5.34□□□□□ -1.55
RIF1-212ENST00000498041 MAP3K6O95382 1288 aa5.34□□□□□ -1.55
RIF1-212ENST00000498041 TARSP26639 723 aaKnown RBP5.34□□□□□ -1.55
RIF1-212ENST00000498041 MZF1P28698 734 aaPredicted RBP5.34□□□□□ -1.55
RIF1-212ENST00000498041 DNM1Q05193 864 aaKnown RBP5.34□□□□□ -1.55
RIF1-212ENST00000498041 KRT25Q7Z3Z0 450 aa5.34□□□□□ -1.55
RIF1-212ENST00000498041 NUDT16Q96DE0 195 aaKnown RBP5.34□□□□□ -1.55
RIF1-212ENST00000498041 ELOA3CA0A087WX78 387 aaPredicted RBP5.33□□□□□ -1.56
RIF1-212ENST00000498041 SOWAHDA6NJG2 315 aa5.33□□□□□ -1.56
RIF1-212ENST00000498041 ELOA3DA6NLF2 546 aaPredicted RBP5.33□□□□□ -1.56
RIF1-212ENST00000498041 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.33□□□□□ -1.56
RIF1-212ENST00000498041 APBA3O96018 575 aa5.33□□□□□ -1.56
RIF1-212ENST00000498041 PDGFAP04085 211 aa5.33□□□□□ -1.56
RIF1-212ENST00000498041 RARAP10276 462 aa5.33□□□□□ -1.56
RIF1-212ENST00000498041 ALAS2P22557 587 aa5.33□□□□□ -1.56
RIF1-212ENST00000498041 USP5P45974 858 aa5.33□□□□□ -1.56
RIF1-212ENST00000498041 TRIP4Q15650 581 aaPredicted RBP5.33□□□□□ -1.56
RIF1-212ENST00000498041 ECM1Q16610 540 aa5.33□□□□□ -1.56
RIF1-212ENST00000498041 ELOA3BQ3SY89 546 aa5.33□□□□□ -1.56
RIF1-212ENST00000498041 NLRP13Q86W25 1043 aa5.33□□□□□ -1.56
RIF1-212ENST00000498041 TTC16Q8NEE8 873 aa5.33□□□□□ -1.56
RIF1-212ENST00000498041 ELOA3Q8NG57 546 aa5.33□□□□□ -1.56
RIF1-212ENST00000498041 ZFATQ9P243 1243 aa5.33□□□□□ -1.56
RIF1-212ENST00000498041 IVNS1ABPQ9Y6Y0 642 aa5.33□□□□□ -1.56
RIF1-212ENST00000498041 KRTAP9-6A0A140TA67 174 aa5.32□□□□□ -1.56
RIF1-212ENST00000498041 FZD6O60353 706 aa5.32□□□□□ -1.56
RIF1-212ENST00000498041 ADH7P40394 386 aa5.32□□□□□ -1.56
RIF1-212ENST00000498041 TBC1D8BQ0IIM8 1120 aa5.32□□□□□ -1.56
RIF1-212ENST00000498041 PCSK7Q16549 785 aa5.32□□□□□ -1.56
RIF1-212ENST00000498041 PRRT3Q5FWE3 981 aa5.32□□□□□ -1.56
RIF1-212ENST00000498041 PDE12Q6L8Q7 609 aaKnown RBP5.32□□□□□ -1.56
RIF1-212ENST00000498041 AEBP1Q8IUX7 1158 aa5.32□□□□□ -1.56
RIF1-212ENST00000498041 MDFIQ99750 246 aa5.32□□□□□ -1.56
RIF1-212ENST00000498041 KRTAP9-2Q9BYQ4 174 aa5.32□□□□□ -1.56
RIF1-212ENST00000498041 UBE2OQ9C0C9 1292 aaKnown RBP5.32□□□□□ -1.56
RIF1-212ENST00000498041 IGFLR1Q9H665 355 aa5.32□□□□□ -1.56
RIF1-212ENST00000498041 POLIQ9UNA4 740 aa5.32□□□□□ -1.56
RIF1-212ENST00000498041 PSAPP07602 524 aa5.31□□□□□ -1.56
RIF1-212ENST00000498041 SPATA31C1P0DKV0 1188 aa5.31□□□□□ -1.56
RIF1-212ENST00000498041 ARHGAP4P98171 946 aa5.31□□□□□ -1.56
RIF1-212ENST00000498041 C8orf34Q49A92 452 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms