RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 CHMP3Q9Y3E7 222 aa30.17■■■□□ 2.42
TNFRSF4-203ENST00000497869 SURF6O75683 361 aaKnown RBP30.16■■■□□ 2.42
TNFRSF4-203ENST00000497869 NOP58Q9Y2X3 529 aaKnown RBP30.16■■■□□ 2.42
TNFRSF4-203ENST00000497869 NUCB1Q02818 461 aa30.15■■■□□ 2.42
TNFRSF4-203ENST00000497869 APBB1O00213 710 aa30.14■■■□□ 2.42
TNFRSF4-203ENST00000497869 MMP10P09238 476 aa30.14■■■□□ 2.42
TNFRSF4-203ENST00000497869 ZNF594Q96JF6 807 aaPredicted RBP30.14■■■□□ 2.42
TNFRSF4-203ENST00000497869 COPRSQ9NQ92 184 aa30.13■■■□□ 2.41
TNFRSF4-203ENST00000497869 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.13■■■□□ 2.41
TNFRSF4-203ENST00000497869 GTF2E1P29083 439 aaPredicted RBP30.13■■■□□ 2.41
TNFRSF4-203ENST00000497869 ANKRD45Q5TZF3 282 aa30.13■■■□□ 2.41
TNFRSF4-203ENST00000497869 CNBD1Q8NA66 436 aa30.13■■■□□ 2.41
TNFRSF4-203ENST00000497869 SMARCA5O60264 1052 aaPredicted RBP30.12■■■□□ 2.41
TNFRSF4-203ENST00000497869 PDE4AP27815 886 aa30.11■■■□□ 2.41
TNFRSF4-203ENST00000497869 SIL1Q9H173 461 aa30.11■■■□□ 2.41
TNFRSF4-203ENST00000497869 COL4A1P02462 1669 aa30.11■■■□□ 2.41
TNFRSF4-203ENST00000497869 SEC31BQ9NQW1 1179 aa30.1■■■□□ 2.41
TNFRSF4-203ENST00000497869 LAMB2P55268 1798 aa30.1■■■□□ 2.41
TNFRSF4-203ENST00000497869 TNRC6CQ9HCJ0 1690 aaKnown RBP30.1■■■□□ 2.41
TNFRSF4-203ENST00000497869 ITGA6P23229 1130 aa30.1■■■□□ 2.41
TNFRSF4-203ENST00000497869 LNPKQ9C0E8 428 aa30.1■■■□□ 2.41
TNFRSF4-203ENST00000497869 R3HDM1Q15032 1099 aaKnown RBP30.09■■■□□ 2.41
TNFRSF4-203ENST00000497869 SF3B3Q15393 1217 aaKnown RBP30.09■■■□□ 2.41
TNFRSF4-203ENST00000497869 CHD1LQ86WJ1 897 aa30.09■■■□□ 2.41
TNFRSF4-203ENST00000497869 PUS3Q9BZE2 481 aaKnown RBP30.08■■■□□ 2.41
TNFRSF4-203ENST00000497869 SASH1O94885 1247 aa30.08■■■□□ 2.41
TNFRSF4-203ENST00000497869 CCDC57Q2TAC2 916 aa30.08■■■□□ 2.41
TNFRSF4-203ENST00000497869 IFIT5Q13325 482 aaKnown RBP30.07■■■□□ 2.4
TNFRSF4-203ENST00000497869 C16orf71Q8IYS4 520 aaPredicted RBP30.07■■■□□ 2.4
TNFRSF4-203ENST00000497869 LRRC24Q50LG9 513 aa30.06■■■□□ 2.4
TNFRSF4-203ENST00000497869 ATG9AQ7Z3C6 839 aa30.06■■■□□ 2.4
TNFRSF4-203ENST00000497869 NRXN2Q9P2S2 1712 aa30.05■■■□□ 2.4
TNFRSF4-203ENST00000497869 RTL9Q8NET4 1388 aa30.05■■■□□ 2.4
TNFRSF4-203ENST00000497869 NPHP1O15259 732 aa30.05■■■□□ 2.4
TNFRSF4-203ENST00000497869 CCDC152Q4G0S7 254 aa30.05■■■□□ 2.4
TNFRSF4-203ENST00000497869 RHPN1Q8TCX5 695 aa30.05■■■□□ 2.4
TNFRSF4-203ENST00000497869 OTUD7AQ8TE49 926 aaPredicted RBP30.05■■■□□ 2.4
TNFRSF4-203ENST00000497869 NLRP3Q96P20 1036 aa30.05■■■□□ 2.4
TNFRSF4-203ENST00000497869 MYH3P11055 1940 aa30.04■■■□□ 2.4
TNFRSF4-203ENST00000497869 HSP90B1P14625 803 aaKnown RBP30.04■■■□□ 2.4
TNFRSF4-203ENST00000497869 IL1RAPL2Q9NP60 686 aa30.04■■■□□ 2.4
TNFRSF4-203ENST00000497869 ANKRD18BA2A2Z9 1011 aa30.03■■■□□ 2.4
TNFRSF4-203ENST00000497869 RAB11FIP3O75154 756 aa30.03■■■□□ 2.4
TNFRSF4-203ENST00000497869 RIC1Q4ADV7 1423 aa30.03■■■□□ 2.4
TNFRSF4-203ENST00000497869 LRRCC1Q9C099 1032 aa30.03■■■□□ 2.4
TNFRSF4-203ENST00000497869 BCL11AQ9H165 835 aa30.03■■■□□ 2.4
TNFRSF4-203ENST00000497869 PARP3Q9Y6F1 533 aa30.03■■■□□ 2.4
TNFRSF4-203ENST00000497869 PSDA5PKW4 1024 aaPredicted RBP30.02■■■□□ 2.4
TNFRSF4-203ENST00000497869 ZBTB7AO95365 584 aa30.02■■■□□ 2.4
TNFRSF4-203ENST00000497869 ST5P78524 1137 aa30.02■■■□□ 2.4
TNFRSF4-203ENST00000497869 G3BP1Q13283 466 aaKnown RBP eCLIP30.02■■■□□ 2.4
TNFRSF4-203ENST00000497869 SLC16A10Q8TF71 515 aa30.02■■■□□ 2.4
TNFRSF4-203ENST00000497869 CASZ1Q86V15 1759 aa30.01■■■□□ 2.4
TNFRSF4-203ENST00000497869 EYA2O00167 538 aa30.01■■■□□ 2.39
TNFRSF4-203ENST00000497869 RGS3P49796 1198 aa30.01■■■□□ 2.39
TNFRSF4-203ENST00000497869 OS9Q13438 667 aaPredicted RBP30■■■□□ 2.39
TNFRSF4-203ENST00000497869 KIF1BPQ96EK5 621 aa30■■■□□ 2.39
TNFRSF4-203ENST00000497869 CRY2Q49AN0 593 aa29.99■■■□□ 2.39
TNFRSF4-203ENST00000497869 HSP90AB4PQ58FF6 505 aa29.99■■■□□ 2.39
TNFRSF4-203ENST00000497869 CELF1Q92879 486 aaKnown RBP29.99■■■□□ 2.39
TNFRSF4-203ENST00000497869 LRP5O75197 1615 aa29.99■■■□□ 2.39
TNFRSF4-203ENST00000497869 KLRG2A4D1S0 409 aaPredicted RBP29.99■■■□□ 2.39
TNFRSF4-203ENST00000497869 RIPOR2Q9Y4F9 1068 aa29.99■■■□□ 2.39
TNFRSF4-203ENST00000497869 CIAO1O76071 339 aa29.98■■■□□ 2.39
TNFRSF4-203ENST00000497869 TFCP2Q12800 502 aa29.98■■■□□ 2.39
TNFRSF4-203ENST00000497869 TAF7LQ5H9L4 462 aa29.97■■■□□ 2.39
TNFRSF4-203ENST00000497869 SLC51AQ86UW1 340 aa29.97■■■□□ 2.39
TNFRSF4-203ENST00000497869 LDHAL6AQ6ZMR3 332 aa29.96■■■□□ 2.39
TNFRSF4-203ENST00000497869 BRIP1Q9BX63 1249 aa29.96■■■□□ 2.39
TNFRSF4-203ENST00000497869 SALL3Q9BXA9 1300 aa29.96■■■□□ 2.39
TNFRSF4-203ENST00000497869 ATF5Q9Y2D1 282 aaPredicted RBP29.96■■■□□ 2.39
TNFRSF4-203ENST00000497869 ANKRD31Q8N7Z5 1873 aa29.96■■■□□ 2.39
TNFRSF4-203ENST00000497869 ERC1Q8IUD2 1116 aa29.95■■■□□ 2.38
TNFRSF4-203ENST00000497869 IL15P40933 162 aaPredicted RBP29.94■■■□□ 2.38
TNFRSF4-203ENST00000497869 EAF2Q96CJ1 260 aaPredicted RBP29.94■■■□□ 2.38
TNFRSF4-203ENST00000497869 TAF1P21675 1872 aa29.94■■■□□ 2.38
TNFRSF4-203ENST00000497869 PLEKHM2Q8IWE5 1019 aa29.93■■■□□ 2.38
TNFRSF4-203ENST00000497869 FBXO3Q9UK99 471 aa29.93■■■□□ 2.38
TNFRSF4-203ENST00000497869 MTFR1LQ9H019 292 aa29.92■■■□□ 2.38
TNFRSF4-203ENST00000497869 VGLL2Q8N8G2 317 aa29.91■■■□□ 2.38
TNFRSF4-203ENST00000497869 CDC5LQ99459 802 aaKnown RBP29.91■■■□□ 2.38
TNFRSF4-203ENST00000497869 CNNM1Q9NRU3 951 aa29.91■■■□□ 2.38
TNFRSF4-203ENST00000497869 TLR7Q9NYK1 1049 aaKnown RBP29.91■■■□□ 2.38
TNFRSF4-203ENST00000497869 TSHZ3Q63HK5 1081 aa29.9■■■□□ 2.38
TNFRSF4-203ENST00000497869 DDX46Q7L014 1031 aaKnown RBP29.9■■■□□ 2.38
TNFRSF4-203ENST00000497869 SRGNP10124 158 aa29.89■■■□□ 2.38
TNFRSF4-203ENST00000497869 HOXA10P31260 410 aaPredicted RBP29.89■■■□□ 2.38
TNFRSF4-203ENST00000497869 IGHMBP2P38935 993 aaKnown RBP29.89■■■□□ 2.38
TNFRSF4-203ENST00000497869 RPS8P62241 208 aaKnown RBP29.89■■■□□ 2.38
TNFRSF4-203ENST00000497869 ANKRD18AQ8IVF6 992 aa29.89■■■□□ 2.38
TNFRSF4-203ENST00000497869 SGIP1Q9BQI5 828 aa29.89■■■□□ 2.38
TNFRSF4-203ENST00000497869 TNNI3KQ59H18 835 aa29.88■■■□□ 2.37
TNFRSF4-203ENST00000497869 HELBQ8NG08 1087 aaPredicted RBP29.88■■■□□ 2.37
TNFRSF4-203ENST00000497869 MPHOSPH8Q99549 860 aa29.88■■■□□ 2.37
TNFRSF4-203ENST00000497869 FPGT-TNNI3KV9GXZ4 949 aa29.88■■■□□ 2.37
TNFRSF4-203ENST00000497869 AACSQ86V21 672 aa29.88■■■□□ 2.37
TNFRSF4-203ENST00000497869 CLASRPQ8N2M8 674 aaKnown RBP29.88■■■□□ 2.37
TNFRSF4-203ENST00000497869 CCDC8Q9H0W5 538 aaPredicted RBP29.88■■■□□ 2.37
TNFRSF4-203ENST00000497869 ZBTB47Q9UFB7 747 aaPredicted RBP29.88■■■□□ 2.37
TNFRSF4-203ENST00000497869 GRAPQ13588 217 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms