RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 OTUD7BQ6GQQ9 843 aa12.35□□□□□ -0.43
TRAPPC12-223ENST00000497597 FOXR1Q6PIV2 292 aa12.35□□□□□ -0.43
TRAPPC12-223ENST00000497597 NYAP1Q6ZVC0 841 aa12.35□□□□□ -0.43
TRAPPC12-223ENST00000497597 RHOXF2Q9BQY4 288 aa12.35□□□□□ -0.43
TRAPPC12-223ENST00000497597 ORC3Q9UBD5 711 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC12-223ENST00000497597 NDUFB9Q9Y6M9 179 aa12.35□□□□□ -0.43
TRAPPC12-223ENST00000497597 TEFQ10587 303 aa12.34□□□□□ -0.43
TRAPPC12-223ENST00000497597 CCDC12Q8WUD4 166 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC12-223ENST00000497597 CPLX3Q8WVH0 158 aa12.34□□□□□ -0.43
TRAPPC12-223ENST00000497597 LAMC1P11047 1609 aa12.34□□□□□ -0.43
TRAPPC12-223ENST00000497597 ETF1P62495 437 aaKnown RBP12.34□□□□□ -0.43
TRAPPC12-223ENST00000497597 NCBP3Q53F19 620 aaKnown RBP12.34□□□□□ -0.43
TRAPPC12-223ENST00000497597 GDAP1L1Q96MZ0 367 aa12.34□□□□□ -0.43
TRAPPC12-223ENST00000497597 ADAM21Q9UKJ8 722 aa12.34□□□□□ -0.43
TRAPPC12-223ENST00000497597 DHX8Q14562 1220 aaKnown RBP12.34□□□□□ -0.43
TRAPPC12-223ENST00000497597 HSP90AB2PQ58FF8 381 aa12.34□□□□□ -0.43
TRAPPC12-223ENST00000497597 HDGFL1Q5TGJ6 251 aa12.34□□□□□ -0.43
TRAPPC12-223ENST00000497597 PLPPR3Q6T4P5 718 aa12.34□□□□□ -0.43
TRAPPC12-223ENST00000497597 CHST3Q7LGC8 479 aa12.34□□□□□ -0.43
TRAPPC12-223ENST00000497597 PDE11AQ9HCR9 933 aa12.34□□□□□ -0.43
TRAPPC12-223ENST00000497597 TAF6LQ9Y6J9 622 aa12.34□□□□□ -0.43
TRAPPC12-223ENST00000497597 GLRX3O76003 335 aaKnown RBP12.33□□□□□ -0.44
TRAPPC12-223ENST00000497597 PPARDQ03181 441 aa12.33□□□□□ -0.44
TRAPPC12-223ENST00000497597 NMIQ13287 307 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC12-223ENST00000497597 EDC3Q96F86 508 aaKnown RBP12.33□□□□□ -0.44
TRAPPC12-223ENST00000497597 MRFAP1L1Q96HT8 127 aa12.33□□□□□ -0.44
TRAPPC12-223ENST00000497597 DESI2Q9BSY9 194 aa12.33□□□□□ -0.44
TRAPPC12-223ENST00000497597 PHAXQ9H814 394 aaKnown RBP12.33□□□□□ -0.44
TRAPPC12-223ENST00000497597 JRKLQ9Y4A0 524 aa12.33□□□□□ -0.44
TRAPPC12-223ENST00000497597 IQGAP1P46940 1657 aa12.33□□□□□ -0.44
TRAPPC12-223ENST00000497597 PIK3R4Q99570 1358 aa12.33□□□□□ -0.44
TRAPPC12-223ENST00000497597 MNAT1P51948 309 aa12.33□□□□□ -0.44
TRAPPC12-223ENST00000497597 TAF7Q15545 349 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC12-223ENST00000497597 ICE2Q659A1 982 aa12.33□□□□□ -0.44
TRAPPC12-223ENST00000497597 SLC52A1Q9NWF4 448 aa12.33□□□□□ -0.44
TRAPPC12-223ENST00000497597 A0A1B0GUL7 405 aa12.33□□□□□ -0.44
TRAPPC12-223ENST00000497597 H2AFXP16104 143 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC12-223ENST00000497597 PPP2R3AQ06190 1150 aa12.33□□□□□ -0.44
TRAPPC12-223ENST00000497597 DPCR1Q3MIW9 517 aa12.33□□□□□ -0.44
TRAPPC12-223ENST00000497597 CCDC30Q5VVM6 783 aa12.33□□□□□ -0.44
TRAPPC12-223ENST00000497597 JAKMIP3Q5VZ66 844 aa12.33□□□□□ -0.44
TRAPPC12-223ENST00000497597 LZTFL1Q9NQ48 299 aa12.33□□□□□ -0.44
TRAPPC12-223ENST00000497597 HDAC5Q9UQL6 1122 aa12.33□□□□□ -0.44
TRAPPC12-223ENST00000497597 TOP1P11387 765 aaKnown RBP12.32□□□□□ -0.44
TRAPPC12-223ENST00000497597 NCOA5Q9HCD5 579 aaKnown RBP12.32□□□□□ -0.44
TRAPPC12-223ENST00000497597 SASH3O75995 380 aa12.32□□□□□ -0.44
TRAPPC12-223ENST00000497597 ATP1A3P13637 1013 aa12.32□□□□□ -0.44
TRAPPC12-223ENST00000497597 UBASH3AP57075 661 aa12.32□□□□□ -0.44
TRAPPC12-223ENST00000497597 IQCB1Q15051 598 aa12.32□□□□□ -0.44
TRAPPC12-223ENST00000497597 NUTM2GQ5VZR2 741 aa12.32□□□□□ -0.44
TRAPPC12-223ENST00000497597 USP28Q96RU2 1077 aa12.32□□□□□ -0.44
TRAPPC12-223ENST00000497597 HINFPQ9BQA5 517 aa12.32□□□□□ -0.44
TRAPPC12-223ENST00000497597 SOS1Q07889 1333 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC12-223ENST00000497597 ST3GAL1Q11201 340 aa12.31□□□□□ -0.44
TRAPPC12-223ENST00000497597 SEC62Q99442 399 aaKnown RBP12.31□□□□□ -0.44
TRAPPC12-223ENST00000497597 CHL1O00533 1208 aa12.31□□□□□ -0.44
TRAPPC12-223ENST00000497597 NBPF7P0C2Y1 421 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC12-223ENST00000497597 AIMP1Q12904 312 aaKnown RBP12.31□□□□□ -0.44
TRAPPC12-223ENST00000497597 ARMCX5Q6P1M9 558 aa12.31□□□□□ -0.44
TRAPPC12-223ENST00000497597 CCDC150Q8NCX0 1101 aa12.31□□□□□ -0.44
TRAPPC12-223ENST00000497597 FAM135BQ49AJ0 1406 aa12.31□□□□□ -0.44
TRAPPC12-223ENST00000497597 SLC3A2P08195 630 aaKnown RBP12.31□□□□□ -0.44
TRAPPC12-223ENST00000497597 AXDND1Q5T1B0 1012 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC12-223ENST00000497597 TEX2Q8IWB9 1127 aa12.31□□□□□ -0.44
TRAPPC12-223ENST00000497597 PARD6BQ9BYG5 372 aa12.31□□□□□ -0.44
TRAPPC12-223ENST00000497597 SUGCTQ9HAC7 445 aa12.31□□□□□ -0.44
TRAPPC12-223ENST00000497597 FAN1Q9Y2M0 1017 aa12.31□□□□□ -0.44
TRAPPC12-223ENST00000497597 RICTORQ6R327 1708 aa12.3□□□□□ -0.44
TRAPPC12-223ENST00000497597 MARCKSP29966 332 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC12-223ENST00000497597 SLFNL1Q499Z3 407 aa12.3□□□□□ -0.44
TRAPPC12-223ENST00000497597 Q6ZUG5 572 aa12.3□□□□□ -0.44
TRAPPC12-223ENST00000497597 SRLQ86TD4 932 aa12.3□□□□□ -0.44
TRAPPC12-223ENST00000497597 GOLPH3LQ9H4A5 285 aa12.3□□□□□ -0.44
TRAPPC12-223ENST00000497597 EFCC1Q9HA90 598 aa12.3□□□□□ -0.44
TRAPPC12-223ENST00000497597 ARHGEF5Q12774 1597 aa12.3□□□□□ -0.44
TRAPPC12-223ENST00000497597 FRMPD1Q5SYB0 1578 aa12.3□□□□□ -0.44
TRAPPC12-223ENST00000497597 H0YHG0 523 aa12.3□□□□□ -0.44
TRAPPC12-223ENST00000497597 SLC27A2O14975 620 aa12.3□□□□□ -0.44
TRAPPC12-223ENST00000497597 AMPHP49418 695 aa12.3□□□□□ -0.44
TRAPPC12-223ENST00000497597 CCDC129Q6ZRS4 1044 aa12.3□□□□□ -0.44
TRAPPC12-223ENST00000497597 ADGRL1O94910 1474 aa12.3□□□□□ -0.44
TRAPPC12-223ENST00000497597 ATP2B1P20020 1258 aa12.3□□□□□ -0.44
TRAPPC12-223ENST00000497597 EIF4A2Q14240 407 aaKnown RBP12.3□□□□□ -0.44
TRAPPC12-223ENST00000497597 KIF4BQ2VIQ3 1234 aa12.3□□□□□ -0.44
TRAPPC12-223ENST00000497597 CC2D1AQ6P1N0 951 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC12-223ENST00000497597 KLHL34Q8N239 644 aa12.3□□□□□ -0.44
TRAPPC12-223ENST00000497597 USP44Q9H0E7 712 aa12.3□□□□□ -0.44
TRAPPC12-223ENST00000497597 ZSWIM6Q9HCJ5 1215 aa12.3□□□□□ -0.44
TRAPPC12-223ENST00000497597 ECHDC1Q9NTX5 307 aa12.3□□□□□ -0.44
TRAPPC12-223ENST00000497597 SBNO2Q9Y2G9 1366 aa12.3□□□□□ -0.44
TRAPPC12-223ENST00000497597 ARHGEF40Q8TER5 1519 aa12.29□□□□□ -0.44
TRAPPC12-223ENST00000497597 CLTCL1P53675 1640 aa12.29□□□□□ -0.44
TRAPPC12-223ENST00000497597 ACTN2P35609 894 aa12.29□□□□□ -0.44
TRAPPC12-223ENST00000497597 AKAP17AQ02040 695 aaKnown RBP12.29□□□□□ -0.44
TRAPPC12-223ENST00000497597 SLC20A2Q08357 652 aa12.29□□□□□ -0.44
TRAPPC12-223ENST00000497597 IDI1Q13907 227 aa12.29□□□□□ -0.44
TRAPPC12-223ENST00000497597 LONRF2Q1L5Z9 754 aa12.29□□□□□ -0.44
TRAPPC12-223ENST00000497597 FAM212AQ96EL1 285 aa12.29□□□□□ -0.44
TRAPPC12-223ENST00000497597 N4BP1O75113 896 aaKnown RBP12.29□□□□□ -0.44
TRAPPC12-223ENST00000497597 FANCCQ00597 558 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms