RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 SYT17Q9BSW7 474 aa3.61□□□□□ -1.83
CKS1BP2-201ENST00000497342 MKNK1Q9BUB5 465 aa3.61□□□□□ -1.83
CKS1BP2-201ENST00000497342 TANGO6Q9C0B7 1094 aa3.61□□□□□ -1.83
CKS1BP2-201ENST00000497342 TSPAN10Q9H1Z9 355 aaPredicted RBP3.61□□□□□ -1.83
CKS1BP2-201ENST00000497342 TMX1Q9H3N1 280 aa3.61□□□□□ -1.83
CKS1BP2-201ENST00000497342 CCDC87Q9NVE4 849 aa3.61□□□□□ -1.83
CKS1BP2-201ENST00000497342 TMA7Q9Y2S6 64 aaKnown RBP3.61□□□□□ -1.83
CKS1BP2-201ENST00000497342 AHDC1Q5TGY3 1603 aaPredicted RBP3.61□□□□□ -1.83
CKS1BP2-201ENST00000497342 KIAA1210Q9ULL0 1709 aa3.61□□□□□ -1.83
CKS1BP2-201ENST00000497342 PLCH2O75038 1416 aa3.61□□□□□ -1.83
CKS1BP2-201ENST00000497342 ERVH48-1M5A8F1 160 aa3.6□□□□□ -1.83
CKS1BP2-201ENST00000497342 CDK2AP1O14519 115 aa3.6□□□□□ -1.83
CKS1BP2-201ENST00000497342 ADAMTS2O95450 1211 aa3.6□□□□□ -1.83
CKS1BP2-201ENST00000497342 ATP2B1P20020 1258 aa3.6□□□□□ -1.83
CKS1BP2-201ENST00000497342 PSME1Q06323 249 aa3.6□□□□□ -1.83
CKS1BP2-201ENST00000497342 PSMD2Q13200 908 aa3.6□□□□□ -1.83
CKS1BP2-201ENST00000497342 GNL2Q13823 731 aaKnown RBP3.6□□□□□ -1.83
CKS1BP2-201ENST00000497342 TEAD4Q15561 434 aa3.6□□□□□ -1.83
CKS1BP2-201ENST00000497342 XKR5Q6UX68 686 aa3.6□□□□□ -1.83
CKS1BP2-201ENST00000497342 ZNF654Q8IZM8 581 aa3.6□□□□□ -1.83
CKS1BP2-201ENST00000497342 AFAP1Q8N556 730 aa3.6□□□□□ -1.83
CKS1BP2-201ENST00000497342 SCG3Q8WXD2 468 aaKnown RBP3.6□□□□□ -1.83
CKS1BP2-201ENST00000497342 XAGE2Q96GT9 111 aa3.6□□□□□ -1.83
CKS1BP2-201ENST00000497342 CCSER2Q9H7U1 834 aa3.6□□□□□ -1.83
CKS1BP2-201ENST00000497342 ETNK1Q9HBU6 452 aa3.6□□□□□ -1.83
CKS1BP2-201ENST00000497342 LRFN2Q9ULH4 789 aa3.6□□□□□ -1.83
CKS1BP2-201ENST00000497342 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.6□□□□□ -1.83
CKS1BP2-201ENST00000497342 ADGBQ8N7X0 1667 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 MAGEB6P1A0A0J9YX57 407 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 ANKRD62A6NC57 917 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 A6NJY4 79 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 EML1O00423 815 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 ENPP3O14638 875 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 LILRA1O75019 489 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 RPLP1P05386 114 aaKnown RBP3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 HSPA1AP0DMV8 641 aaKnown RBP3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 HSPA1BP0DMV9 641 aaKnown RBP3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 BRD2P25440 801 aaKnown RBP3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 BCAMP50895 628 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 SMTNP53814 917 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 RACK1P63244 317 aaKnown RBP3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 DHX9Q08211 1270 aaKnown RBP3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 SERINC3Q13530 473 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 NAA30Q147X3 362 aaPredicted RBP3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 EZH2Q15910 746 aaKnown RBP3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 RTN1Q16799 776 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 CCDC144BQ3MJ40 725 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 TJAP1Q5JTD0 557 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 FAM26DQ5JW98 314 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 C1orf53Q5VUE5 145 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 SDE2Q6IQ49 451 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 ERMP1Q7Z2K6 904 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 NLGN1Q8N2Q7 840 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 CAMKK2Q96RR4 588 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 CSRNP1Q96S65 589 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 CARD14Q9BXL6 1004 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 SLC6A16Q9GZN6 736 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 ACBD3Q9H3P7 528 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 MRS2Q9HD23 443 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 CYLDQ9NQC7 956 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 WBP1LQ9NX94 342 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 UNC79Q9P2D8 2635 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 USP19O94966 1318 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 MSH6P52701 1360 aa3.59□□□□□ -1.83
CKS1BP2-201ENST00000497342 DISP2A7MBM2 1401 aa3.59□□□□□ -1.84
CKS1BP2-201ENST00000497342 SETD5Q9C0A6 1442 aa3.59□□□□□ -1.84
CKS1BP2-201ENST00000497342 ATP10DQ9P241 1426 aa3.59□□□□□ -1.84
CKS1BP2-201ENST00000497342 ATP7AQ04656 1500 aa3.59□□□□□ -1.84
CKS1BP2-201ENST00000497342 ZC3H13Q5T200 1668 aaKnown RBP3.59□□□□□ -1.84
CKS1BP2-201ENST00000497342 PKD1L2Q7Z442 2459 aa3.58□□□□□ -1.84
CKS1BP2-201ENST00000497342 ZBTB39O15060 712 aa3.58□□□□□ -1.84
CKS1BP2-201ENST00000497342 PPM1GO15355 546 aaPredicted RBP3.58□□□□□ -1.84
CKS1BP2-201ENST00000497342 PDGFAP04085 211 aa3.58□□□□□ -1.84
CKS1BP2-201ENST00000497342 NEFLP07196 543 aa3.58□□□□□ -1.84
CKS1BP2-201ENST00000497342 KCNA6P17658 529 aa3.58□□□□□ -1.84
CKS1BP2-201ENST00000497342 ARID5AQ03989 594 aa3.58□□□□□ -1.84
CKS1BP2-201ENST00000497342 ESCO1Q5FWF5 840 aa3.58□□□□□ -1.84
CKS1BP2-201ENST00000497342 C9orf131Q5VYM1 1079 aa3.58□□□□□ -1.84
CKS1BP2-201ENST00000497342 CYP2U1Q7Z449 544 aa3.58□□□□□ -1.84
CKS1BP2-201ENST00000497342 LRP10Q7Z4F1 713 aa3.58□□□□□ -1.84
CKS1BP2-201ENST00000497342 MCF2L2Q86YR7 1114 aa3.58□□□□□ -1.84
CKS1BP2-201ENST00000497342 C7orf43Q8WVR3 580 aa3.58□□□□□ -1.84
CKS1BP2-201ENST00000497342 LRRC59Q96AG4 307 aaKnown RBP3.58□□□□□ -1.84
CKS1BP2-201ENST00000497342 FHDC1Q9C0D6 1143 aaPredicted RBP3.58□□□□□ -1.84
CKS1BP2-201ENST00000497342 SRCIN1Q9C0H9 1055 aa3.58□□□□□ -1.84
CKS1BP2-201ENST00000497342 KCNQ5Q9NR82 932 aa3.58□□□□□ -1.84
CKS1BP2-201ENST00000497342 RNF19AQ9NV58 838 aa3.58□□□□□ -1.84
CKS1BP2-201ENST00000497342 GPC6Q9Y625 555 aaPredicted RBP3.58□□□□□ -1.84
CKS1BP2-201ENST00000497342 TNRQ92752 1358 aa3.58□□□□□ -1.84
CKS1BP2-201ENST00000497342 SBNO2Q9Y2G9 1366 aa3.58□□□□□ -1.84
CKS1BP2-201ENST00000497342 ABCC3O15438 1527 aa3.58□□□□□ -1.84
CKS1BP2-201ENST00000497342 KIF14Q15058 1648 aa3.58□□□□□ -1.84
CKS1BP2-201ENST00000497342 PNMA6FA0A0J9YX94 578 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 ZBTB24O43167 697 aaPredicted RBP3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 A2MP01023 1474 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 ATF4P18848 351 aaPredicted RBP3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 HSD3B2P26439 372 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 GRM5P41594 1212 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 MAPK8P45983 427 aa3.57□□□□□ -1.84
CKS1BP2-201ENST00000497342 HTRA3P83110 453 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms