RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 HYPKQ9NX55 129 aa10.14□□□□□ -0.79
SRRM1-220ENST00000496882 CHPF2Q9P2E5 772 aa10.14□□□□□ -0.79
SRRM1-220ENST00000496882 CACNA1SQ13698 1873 aa10.14□□□□□ -0.79
SRRM1-220ENST00000496882 SLX4Q8IY92 1834 aa10.14□□□□□ -0.79
SRRM1-220ENST00000496882 PPEF1O14829 653 aaPredicted RBP10.13□□□□□ -0.79
SRRM1-220ENST00000496882 PRELPP51888 382 aa10.13□□□□□ -0.79
SRRM1-220ENST00000496882 GOLGA2Q08379 1002 aa10.13□□□□□ -0.79
SRRM1-220ENST00000496882 TCIRG1Q13488 830 aa10.13□□□□□ -0.79
SRRM1-220ENST00000496882 JDP2Q8WYK2 163 aa10.13□□□□□ -0.79
SRRM1-220ENST00000496882 MFRPQ9BY79 579 aa10.13□□□□□ -0.79
SRRM1-220ENST00000496882 MRS2Q9HD23 443 aa10.13□□□□□ -0.79
SRRM1-220ENST00000496882 TRMT112Q9UI30 125 aaKnown RBP10.13□□□□□ -0.79
SRRM1-220ENST00000496882 FER1L6Q2WGJ9 1857 aa10.13□□□□□ -0.79
SRRM1-220ENST00000496882 IQCA1LA6NCM1 817 aa10.12□□□□□ -0.79
SRRM1-220ENST00000496882 HOXA10P31260 410 aaPredicted RBP10.12□□□□□ -0.79
SRRM1-220ENST00000496882 IARSP41252 1262 aaKnown RBP10.12□□□□□ -0.79
SRRM1-220ENST00000496882 TMEM132AQ24JP5 1023 aa10.12□□□□□ -0.79
SRRM1-220ENST00000496882 ANKRD13DQ6ZTN6 518 aa10.12□□□□□ -0.79
SRRM1-220ENST00000496882 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.12□□□□□ -0.79
SRRM1-220ENST00000496882 LRP10Q7Z4F1 713 aa10.12□□□□□ -0.79
SRRM1-220ENST00000496882 SYNE4Q8N205 404 aa10.12□□□□□ -0.79
SRRM1-220ENST00000496882 PLBD2Q8NHP8 589 aa10.12□□□□□ -0.79
SRRM1-220ENST00000496882 C7orf43Q8WVR3 580 aa10.12□□□□□ -0.79
SRRM1-220ENST00000496882 CRAMP1Q96RY5 1269 aa10.12□□□□□ -0.79
SRRM1-220ENST00000496882 ZNF277Q9NRM2 450 aaPredicted RBP10.12□□□□□ -0.79
SRRM1-220ENST00000496882 SH3TC1Q8TE82 1336 aa10.11□□□□□ -0.79
SRRM1-220ENST00000496882 CCDC88AQ3V6T2 1871 aa10.11□□□□□ -0.79
SRRM1-220ENST00000496882 TCERG1O14776 1098 aaKnown RBP10.11□□□□□ -0.79
SRRM1-220ENST00000496882 DDX58O95786 925 aaKnown RBP10.11□□□□□ -0.79
SRRM1-220ENST00000496882 DDX46Q7L014 1031 aaKnown RBP10.11□□□□□ -0.79
SRRM1-220ENST00000496882 ERICH6Q7L0X2 663 aa10.11□□□□□ -0.79
SRRM1-220ENST00000496882 RIC3Q7Z5B4 369 aa10.11□□□□□ -0.79
SRRM1-220ENST00000496882 NLRP10Q86W26 655 aa10.11□□□□□ -0.79
SRRM1-220ENST00000496882 PSMD1Q99460 953 aa10.11□□□□□ -0.79
SRRM1-220ENST00000496882 ELL2O00472 640 aaPredicted RBP10.1□□□□□ -0.79
SRRM1-220ENST00000496882 DDNO94850 711 aaPredicted RBP10.1□□□□□ -0.79
SRRM1-220ENST00000496882 ZNF853P0CG23 659 aa10.1□□□□□ -0.79
SRRM1-220ENST00000496882 HSP90B1P14625 803 aaKnown RBP10.1□□□□□ -0.79
SRRM1-220ENST00000496882 EIF6P56537 245 aaKnown RBP10.1□□□□□ -0.79
SRRM1-220ENST00000496882 SLC10A5Q5PT55 438 aa10.1□□□□□ -0.79
SRRM1-220ENST00000496882 CCDC30Q5VVM6 783 aa10.1□□□□□ -0.79
SRRM1-220ENST00000496882 OLFM4Q6UX06 510 aa10.1□□□□□ -0.79
SRRM1-220ENST00000496882 SUPT20HQ8NEM7 779 aa10.1□□□□□ -0.79
SRRM1-220ENST00000496882 DICER1Q9UPY3 1922 aaKnown RBP10.09□□□□□ -0.79
SRRM1-220ENST00000496882 BBOX1O75936 387 aa10.09□□□□□ -0.79
SRRM1-220ENST00000496882 HCLS1P14317 486 aaPredicted RBP10.09□□□□□ -0.79
SRRM1-220ENST00000496882 LARGE2Q8N3Y3 721 aa10.09□□□□□ -0.79
SRRM1-220ENST00000496882 STK31Q9BXU1 1019 aa10.09□□□□□ -0.79
SRRM1-220ENST00000496882 WDR90Q96KV7 1748 aa10.09□□□□□ -0.79
SRRM1-220ENST00000496882 ANKRD36CQ5JPF3 1778 aa10.09□□□□□ -0.79
SRRM1-220ENST00000496882 ATP5J2-PTCD1G3V325 749 aa10.08□□□□□ -0.8
SRRM1-220ENST00000496882 PRKAR2AP13861 404 aaKnown RBP10.08□□□□□ -0.8
SRRM1-220ENST00000496882 LMOD1P29536 600 aaPredicted RBP10.08□□□□□ -0.8
SRRM1-220ENST00000496882 CCDC27Q2M243 656 aa10.08□□□□□ -0.8
SRRM1-220ENST00000496882 TMC4Q7Z404 712 aa10.08□□□□□ -0.8
SRRM1-220ENST00000496882 NIM1KQ8IY84 436 aa10.08□□□□□ -0.8
SRRM1-220ENST00000496882 HACL1Q9UJ83 578 aa10.08□□□□□ -0.8
SRRM1-220ENST00000496882 ATP6V0A2Q9Y487 856 aa10.08□□□□□ -0.8
SRRM1-220ENST00000496882 ABCC4O15439 1325 aa10.07□□□□□ -0.8
SRRM1-220ENST00000496882 PPIP5K2O43314 1243 aa10.07□□□□□ -0.8
SRRM1-220ENST00000496882 GRAPQ13588 217 aa10.07□□□□□ -0.8
SRRM1-220ENST00000496882 CCDC184Q52MB2 194 aa10.07□□□□□ -0.8
SRRM1-220ENST00000496882 EAPPQ56P03 285 aaPredicted RBP10.07□□□□□ -0.8
SRRM1-220ENST00000496882 DPP8Q6V1X1 898 aaPredicted RBP10.07□□□□□ -0.8
SRRM1-220ENST00000496882 C3orf67Q6ZVT6 689 aa10.07□□□□□ -0.8
SRRM1-220ENST00000496882 C8orf58Q8NAV2 365 aa10.07□□□□□ -0.8
SRRM1-220ENST00000496882 GRAPLQ8TC17 118 aaPredicted RBP10.07□□□□□ -0.8
SRRM1-220ENST00000496882 L3MBTL3Q96JM7 780 aaPredicted RBP10.07□□□□□ -0.8
SRRM1-220ENST00000496882 ISCA1Q9BUE6 129 aa10.07□□□□□ -0.8
SRRM1-220ENST00000496882 VPS33BQ9H267 617 aa10.07□□□□□ -0.8
SRRM1-220ENST00000496882 GJA3Q9Y6H8 435 aa10.07□□□□□ -0.8
SRRM1-220ENST00000496882 IL16Q14005 1332 aa10.07□□□□□ -0.8
SRRM1-220ENST00000496882 ZNF541Q9H0D2 1346 aa10.07□□□□□ -0.8
SRRM1-220ENST00000496882 FZD9O00144 591 aa10.06□□□□□ -0.8
SRRM1-220ENST00000496882 IRS4O14654 1257 aaPredicted RBP10.06□□□□□ -0.8
SRRM1-220ENST00000496882 NEXNQ0ZGT2 675 aa10.06□□□□□ -0.8
SRRM1-220ENST00000496882 RTL5Q5HYW3 569 aaPredicted RBP10.06□□□□□ -0.8
SRRM1-220ENST00000496882 PNMA8AQ86V59 439 aaPredicted RBP10.06□□□□□ -0.8
SRRM1-220ENST00000496882 LDHDQ86WU2 507 aa10.06□□□□□ -0.8
SRRM1-220ENST00000496882 WWC1Q8IX03 1113 aa10.06□□□□□ -0.8
SRRM1-220ENST00000496882 SP8Q8IXZ3 490 aa10.06□□□□□ -0.8
SRRM1-220ENST00000496882 GPC2Q8N158 579 aa10.06□□□□□ -0.8
SRRM1-220ENST00000496882 MPNDQ8N594 471 aa10.06□□□□□ -0.8
SRRM1-220ENST00000496882 TSR2Q969E8 191 aaKnown RBP10.06□□□□□ -0.8
SRRM1-220ENST00000496882 ZNF428Q96B54 188 aa10.06□□□□□ -0.8
SRRM1-220ENST00000496882 FAM89AQ96GI7 184 aa10.06□□□□□ -0.8
SRRM1-220ENST00000496882 MYD88Q99836 296 aa10.06□□□□□ -0.8
SRRM1-220ENST00000496882 PHAXQ9H814 394 aaKnown RBP10.06□□□□□ -0.8
SRRM1-220ENST00000496882 POTECB2RU33 542 aa10.05□□□□□ -0.8
SRRM1-220ENST00000496882 EPHX2P34913 555 aa10.05□□□□□ -0.8
SRRM1-220ENST00000496882 TRIM28Q13263 835 aaKnown RBP10.05□□□□□ -0.8
SRRM1-220ENST00000496882 E2F4Q16254 413 aa10.05□□□□□ -0.8
SRRM1-220ENST00000496882 AOC3Q16853 763 aa10.05□□□□□ -0.8
SRRM1-220ENST00000496882 TWISTNBQ3B726 338 aaPredicted RBP10.05□□□□□ -0.8
SRRM1-220ENST00000496882 ZBTB38Q8NAP3 1195 aaPredicted RBP10.05□□□□□ -0.8
SRRM1-220ENST00000496882 CCDC191Q8NCU4 936 aa10.05□□□□□ -0.8
SRRM1-220ENST00000496882 KLRG1Q96E93 195 aa10.05□□□□□ -0.8
SRRM1-220ENST00000496882 TAF1DQ9H5J8 278 aaPredicted RBP10.05□□□□□ -0.8
SRRM1-220ENST00000496882 CWC25Q9NXE8 425 aaPredicted RBP10.05□□□□□ -0.8
SRRM1-220ENST00000496882 SALL2Q9Y467 1007 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms